RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
LSG1-206ENST00000466391 WDR70Q9NW82 654 aa15.04■□□□□ -0
LSG1-206ENST00000466391 CRISPLD2Q9H0B8 497 aa15.03■□□□□ -0
LSG1-206ENST00000466391 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
LSG1-206ENST00000466391 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
LSG1-206ENST00000466391 TMC2Q8TDI7 906 aa15□□□□□ -0.01
LSG1-206ENST00000466391 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
LSG1-206ENST00000466391 GPHNQ9NQX3 736 aaPredicted RBP14.98□□□□□ -0.01
LSG1-206ENST00000466391 POTEJP0CG39 1038 aa14.97□□□□□ -0.01
LSG1-206ENST00000466391 TMEM92Q6UXU6 159 aa14.96□□□□□ -0.01
LSG1-206ENST00000466391 DDX27Q96GQ7 796 aaKnown RBP14.96□□□□□ -0.01
LSG1-206ENST00000466391 C2orf72A6NCS6 295 aa14.95□□□□□ -0.02
LSG1-206ENST00000466391 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.95□□□□□ -0.02
LSG1-206ENST00000466391 MFSD10Q14728 455 aa14.94□□□□□ -0.02
LSG1-206ENST00000466391 KIF3CO14782 793 aa14.91□□□□□ -0.02
LSG1-206ENST00000466391 DSG2Q14126 1118 aa14.9□□□□□ -0.02
LSG1-206ENST00000466391 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
LSG1-206ENST00000466391 FOXK1P85037 733 aa14.87□□□□□ -0.03
LSG1-206ENST00000466391 E2F4Q16254 413 aa14.86□□□□□ -0.03
LSG1-206ENST00000466391 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
LSG1-206ENST00000466391 MAMSTRQ6ZN01 415 aa14.85□□□□□ -0.03
LSG1-206ENST00000466391 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
LSG1-206ENST00000466391 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
LSG1-206ENST00000466391 KCNV2Q8TDN2 545 aa14.83□□□□□ -0.04
LSG1-206ENST00000466391 LHX8Q68G74 356 aa14.8□□□□□ -0.04
LSG1-206ENST00000466391 SLAIN1Q8ND83 568 aa14.8□□□□□ -0.04
LSG1-206ENST00000466391 CAMK2BQ13554 666 aa14.77□□□□□ -0.05
LSG1-206ENST00000466391 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
LSG1-206ENST00000466391 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
LSG1-206ENST00000466391 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
LSG1-206ENST00000466391 BCANQ96GW7 911 aa14.72□□□□□ -0.05
LSG1-206ENST00000466391 EMILIN3Q9NT22 766 aa14.72□□□□□ -0.05
LSG1-206ENST00000466391 NBR1Q14596 966 aa14.7□□□□□ -0.06
LSG1-206ENST00000466391 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.06
LSG1-206ENST00000466391 DPYSL4O14531 572 aa14.66□□□□□ -0.06
LSG1-206ENST00000466391 ARIH1Q9Y4X5 557 aaPredicted RBP14.64□□□□□ -0.07
LSG1-206ENST00000466391 MAP3K9P80192 1104 aa14.62□□□□□ -0.07
LSG1-206ENST00000466391 OXER1Q8TDS5 423 aa14.62□□□□□ -0.07
LSG1-206ENST00000466391 SLC34A2O95436 690 aa14.6□□□□□ -0.07
LSG1-206ENST00000466391 HOXB3P14651 431 aaPredicted RBP14.58□□□□□ -0.08
LSG1-206ENST00000466391 DOK7Q18PE1 504 aa14.58□□□□□ -0.08
LSG1-206ENST00000466391 PTCD2Q8WV60 388 aaKnown RBP14.58□□□□□ -0.08
LSG1-206ENST00000466391 TBC1D12O60347 775 aa14.56□□□□□ -0.08
LSG1-206ENST00000466391 SEMA3EO15041 775 aa14.55□□□□□ -0.08
LSG1-206ENST00000466391 PCDHGA4Q9Y5G9 962 aa14.54□□□□□ -0.08
LSG1-206ENST00000466391 SNPHO15079 494 aa14.53□□□□□ -0.08
LSG1-206ENST00000466391 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
LSG1-206ENST00000466391 SPDYE16A6NNV3 312 aaPredicted RBP14.52□□□□□ -0.09
LSG1-206ENST00000466391 RIMBP2O15034 1052 aa14.52□□□□□ -0.09
LSG1-206ENST00000466391 PDIA6Q15084 440 aa14.52□□□□□ -0.09
LSG1-206ENST00000466391 EVI5O60447 810 aa14.5□□□□□ -0.09
LSG1-206ENST00000466391 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
LSG1-206ENST00000466391 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
LSG1-206ENST00000466391 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
LSG1-206ENST00000466391 KHSRPQ92945 711 aaKnown RBP eCLIP14.47□□□□□ -0.09
LSG1-206ENST00000466391 ZSWIM6Q9HCJ5 1215 aa14.46□□□□□ -0.09
LSG1-206ENST00000466391 TESPA1A2RU30 521 aaPredicted RBP14.45□□□□□ -0.1
LSG1-206ENST00000466391 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
LSG1-206ENST00000466391 MLLT3P42568 568 aaPredicted RBP14.44□□□□□ -0.1
LSG1-206ENST00000466391 GPR153Q6NV75 609 aa14.44□□□□□ -0.1
LSG1-206ENST00000466391 NUDT7P0C024 238 aa14.43□□□□□ -0.1
LSG1-206ENST00000466391 GRXCR2A6NFK2 248 aa14.39□□□□□ -0.11
LSG1-206ENST00000466391 TULP1O00294 542 aaPredicted RBP14.39□□□□□ -0.11
LSG1-206ENST00000466391 DDX12PQ92771 950 aa14.39□□□□□ -0.11
LSG1-206ENST00000466391 ANO8Q9HCE9 1232 aaPredicted RBP14.39□□□□□ -0.11
LSG1-206ENST00000466391 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
LSG1-206ENST00000466391 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
LSG1-206ENST00000466391 HOXB1P14653 301 aaPredicted RBP14.36□□□□□ -0.11
LSG1-206ENST00000466391 PTGER2P43116 358 aa14.36□□□□□ -0.11
LSG1-206ENST00000466391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
LSG1-206ENST00000466391 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
LSG1-206ENST00000466391 ST18O60284 1047 aa14.32□□□□□ -0.12
LSG1-206ENST00000466391 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
LSG1-206ENST00000466391 LHX6Q9UPM6 363 aa14.3□□□□□ -0.12
LSG1-206ENST00000466391 RBM26Q5T8P6 1007 aaKnown RBP14.28□□□□□ -0.12
LSG1-206ENST00000466391 PHF14O94880 888 aa14.27□□□□□ -0.13
LSG1-206ENST00000466391 OSBPP22059 807 aa14.27□□□□□ -0.13
LSG1-206ENST00000466391 ZNF454Q8N9F8 522 aa14.26□□□□□ -0.13
LSG1-206ENST00000466391 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
LSG1-206ENST00000466391 PCDHGA10Q9Y5H3 936 aa14.26□□□□□ -0.13
LSG1-206ENST00000466391 FOSBP53539 338 aa14.25□□□□□ -0.13
LSG1-206ENST00000466391 MARVELD3Q96A59 401 aa14.24□□□□□ -0.13
LSG1-206ENST00000466391 EPAS1Q99814 870 aa14.24□□□□□ -0.13
LSG1-206ENST00000466391 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
LSG1-206ENST00000466391 TYW1BQ6NUM6 668 aa14.22□□□□□ -0.13
LSG1-206ENST00000466391 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
LSG1-206ENST00000466391 EMP3P54852 163 aa14.21□□□□□ -0.13
LSG1-206ENST00000466391 TPRNQ4KMQ1 711 aa14.21□□□□□ -0.13
LSG1-206ENST00000466391 ERBB3P21860 1342 aa14.19□□□□□ -0.14
LSG1-206ENST00000466391 NACADO15069 1562 aa14.19□□□□□ -0.14
LSG1-206ENST00000466391 PSDA5PKW4 1024 aaPredicted RBP14.19□□□□□ -0.14
LSG1-206ENST00000466391 ZDHHC16Q969W1 377 aa14.19□□□□□ -0.14
LSG1-206ENST00000466391 NUTM2FA1L443 756 aa14.18□□□□□ -0.14
LSG1-206ENST00000466391 MAP3K7O43318 606 aa14.18□□□□□ -0.14
LSG1-206ENST00000466391 EN1Q05925 392 aaPredicted RBP14.18□□□□□ -0.14
LSG1-206ENST00000466391 PPP4R3BQ5MIZ7 849 aa14.18□□□□□ -0.14
LSG1-206ENST00000466391 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
LSG1-206ENST00000466391 LCE2DQ5TA82 110 aaPredicted RBP14.17□□□□□ -0.14
LSG1-206ENST00000466391 GPIHBP1Q8IV16 184 aa14.17□□□□□ -0.14
LSG1-206ENST00000466391 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms