RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
CACNA1C-224ENST00000465934 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
CACNA1C-224ENST00000465934 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
CACNA1C-224ENST00000465934 ZFYVE16Q7Z3T8 1539 aa22.71■■□□□ 1.23
CACNA1C-224ENST00000465934 CEP162Q5TB80 1403 aa22.69■■□□□ 1.22
CACNA1C-224ENST00000465934 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
CACNA1C-224ENST00000465934 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
CACNA1C-224ENST00000465934 PTPRMP28827 1452 aa22.66■■□□□ 1.22
CACNA1C-224ENST00000465934 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
CACNA1C-224ENST00000465934 HECW2Q9P2P5 1572 aa22.65■■□□□ 1.22
CACNA1C-224ENST00000465934 AFAP1Q8N556 730 aa22.65■■□□□ 1.22
CACNA1C-224ENST00000465934 SIGLEC1Q9BZZ2 1709 aa22.65■■□□□ 1.22
CACNA1C-224ENST00000465934 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
CACNA1C-224ENST00000465934 PREX2Q70Z35 1606 aa22.63■■□□□ 1.21
CACNA1C-224ENST00000465934 MADDQ8WXG6 1647 aa22.63■■□□□ 1.21
CACNA1C-224ENST00000465934 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
CACNA1C-224ENST00000465934 ZNF518AQ6AHZ1 1483 aa22.62■■□□□ 1.21
CACNA1C-224ENST00000465934 ARHGEF12Q9NZN5 1544 aa22.61■■□□□ 1.21
CACNA1C-224ENST00000465934 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
CACNA1C-224ENST00000465934 KDM5CP41229 1560 aa22.59■■□□□ 1.21
CACNA1C-224ENST00000465934 ABCC1P33527 1531 aa22.58■■□□□ 1.21
CACNA1C-224ENST00000465934 MLECQ14165 292 aa22.58■■□□□ 1.21
CACNA1C-224ENST00000465934 ATP10AO60312 1499 aa22.58■■□□□ 1.2
CACNA1C-224ENST00000465934 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
CACNA1C-224ENST00000465934 MTUS2Q5JR59 1369 aa22.56■■□□□ 1.2
CACNA1C-224ENST00000465934 CDC42BPAQ5VT25 1732 aa22.56■■□□□ 1.2
CACNA1C-224ENST00000465934 C9orf84Q5VXU9 1444 aa22.56■■□□□ 1.2
CACNA1C-224ENST00000465934 ZNF777Q9ULD5 760 aaPredicted RBP22.55■■□□□ 1.2
CACNA1C-224ENST00000465934 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
CACNA1C-224ENST00000465934 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
CACNA1C-224ENST00000465934 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
CACNA1C-224ENST00000465934 MLH3Q9UHC1 1453 aa22.51■■□□□ 1.19
CACNA1C-224ENST00000465934 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
CACNA1C-224ENST00000465934 SAMD9LQ8IVG5 1584 aa22.5■■□□□ 1.19
CACNA1C-224ENST00000465934 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
CACNA1C-224ENST00000465934 DIP2CQ9Y2E4 1556 aa22.5■■□□□ 1.19
CACNA1C-224ENST00000465934 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
CACNA1C-224ENST00000465934 SYCP2Q9BX26 1530 aa22.48■■□□□ 1.19
CACNA1C-224ENST00000465934 ABCA6Q8N139 1617 aa22.48■■□□□ 1.19
CACNA1C-224ENST00000465934 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
CACNA1C-224ENST00000465934 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
CACNA1C-224ENST00000465934 TIAM1Q13009 1591 aa22.44■■□□□ 1.18
CACNA1C-224ENST00000465934 VPS8Q8N3P4 1428 aa22.43■■□□□ 1.18
CACNA1C-224ENST00000465934 ZNF644Q9H582 1327 aaPredicted RBP22.43■■□□□ 1.18
CACNA1C-224ENST00000465934 LMTK3Q96Q04 1460 aa22.42■■□□□ 1.18
CACNA1C-224ENST00000465934 REREQ9P2R6 1566 aa22.42■■□□□ 1.18
CACNA1C-224ENST00000465934 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
CACNA1C-224ENST00000465934 FER1L4A9Z1Z3 1794 aa22.4■■□□□ 1.18
CACNA1C-224ENST00000465934 KIDINS220Q9ULH0 1771 aa22.4■■□□□ 1.18
CACNA1C-224ENST00000465934 SPAG9O60271 1321 aaKnown RBP22.4■■□□□ 1.18
CACNA1C-224ENST00000465934 PLEKHH2Q8IVE3 1493 aa22.39■■□□□ 1.17
CACNA1C-224ENST00000465934 CEBPAP49715 358 aaPredicted RBP22.38■■□□□ 1.17
CACNA1C-224ENST00000465934 NCOA2Q15596 1464 aa22.37■■□□□ 1.17
CACNA1C-224ENST00000465934 AGLP35573 1532 aa22.36■■□□□ 1.17
CACNA1C-224ENST00000465934 HSPA2P54652 639 aa22.34■■□□□ 1.17
CACNA1C-224ENST00000465934 ATP7AQ04656 1500 aa22.33■■□□□ 1.17
CACNA1C-224ENST00000465934 MBD5Q9P267 1494 aa22.33■■□□□ 1.16
CACNA1C-224ENST00000465934 INO80Q9ULG1 1556 aaPredicted RBP22.32■■□□□ 1.16
CACNA1C-224ENST00000465934 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
CACNA1C-224ENST00000465934 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
CACNA1C-224ENST00000465934 SUPT6HQ7KZ85 1726 aaKnown RBP22.3■■□□□ 1.16
CACNA1C-224ENST00000465934 CAMSAP2Q08AD1 1489 aa22.27■■□□□ 1.16
CACNA1C-224ENST00000465934 A2MP01023 1474 aa22.26■■□□□ 1.15
CACNA1C-224ENST00000465934 PLXNC1O60486 1568 aa22.25■■□□□ 1.15
CACNA1C-224ENST00000465934 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
CACNA1C-224ENST00000465934 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
CACNA1C-224ENST00000465934 MAP3K1Q13233 1512 aa22.23■■□□□ 1.15
CACNA1C-224ENST00000465934 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
CACNA1C-224ENST00000465934 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
CACNA1C-224ENST00000465934 CNTLNQ9NXG0 1405 aa22.2■■□□□ 1.14
CACNA1C-224ENST00000465934 C3P01024 1663 aa22.2■■□□□ 1.14
CACNA1C-224ENST00000465934 GGT6Q6P531 493 aa22.18■■□□□ 1.14
CACNA1C-224ENST00000465934 PREX1Q8TCU6 1659 aa22.17■■□□□ 1.14
CACNA1C-224ENST00000465934 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
CACNA1C-224ENST00000465934 ZMYM3Q14202 1370 aa22.14■■□□□ 1.14
CACNA1C-224ENST00000465934 DHX29Q7Z478 1369 aaKnown RBP22.14■■□□□ 1.14
CACNA1C-224ENST00000465934 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.13
CACNA1C-224ENST00000465934 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.13
CACNA1C-224ENST00000465934 RSPH4AQ5TD94 716 aa22.13■■□□□ 1.13
CACNA1C-224ENST00000465934 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
CACNA1C-224ENST00000465934 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
CACNA1C-224ENST00000465934 APLP2Q06481 763 aa22.09■■□□□ 1.13
CACNA1C-224ENST00000465934 MROH2AA6NES4 1674 aa22.09■■□□□ 1.13
CACNA1C-224ENST00000465934 CLTCQ00610 1675 aaKnown RBP22.09■■□□□ 1.13
CACNA1C-224ENST00000465934 KIF3BO15066 747 aa22.08■■□□□ 1.13
CACNA1C-224ENST00000465934 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
CACNA1C-224ENST00000465934 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
CACNA1C-224ENST00000465934 NPATQ14207 1427 aa22.07■■□□□ 1.12
CACNA1C-224ENST00000465934 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
CACNA1C-224ENST00000465934 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
CACNA1C-224ENST00000465934 SETD1BQ9UPS6 1966 aaKnown RBP22.03■■□□□ 1.12
CACNA1C-224ENST00000465934 STRCQ7RTU9 1775 aa22.02■■□□□ 1.11
CACNA1C-224ENST00000465934 MAST1Q9Y2H9 1570 aa22.01■■□□□ 1.11
CACNA1C-224ENST00000465934 KDM5DQ9BY66 1539 aa21.98■■□□□ 1.11
CACNA1C-224ENST00000465934 FBXO41Q8TF61 875 aa21.98■■□□□ 1.11
CACNA1C-224ENST00000465934 ABCC5O15440 1437 aa21.97■■□□□ 1.11
CACNA1C-224ENST00000465934 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
CACNA1C-224ENST00000465934 FBXO31Q5XUX0 539 aaPredicted RBP21.97■■□□□ 1.11
CACNA1C-224ENST00000465934 PTPN23Q9H3S7 1636 aa21.97■■□□□ 1.11
CACNA1C-224ENST00000465934 WASHC2CQ9Y4E1 1318 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms