RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 PREX2Q70Z35 1606 aa32.59■■■□□ 2.81
COL2A1-203ENST00000465743 POGZQ7Z3K3 1410 aa32.59■■■□□ 2.81
COL2A1-203ENST00000465743 SCAPERQ9BY12 1400 aa32.59■■■□□ 2.81
COL2A1-203ENST00000465743 SIGLEC1Q9BZZ2 1709 aa32.57■■■□□ 2.8
COL2A1-203ENST00000465743 YEATS2Q9ULM3 1422 aa32.55■■■□□ 2.8
COL2A1-203ENST00000465743 ZFYVE16Q7Z3T8 1539 aa32.55■■■□□ 2.8
COL2A1-203ENST00000465743 CDC42BPAQ5VT25 1732 aa32.54■■■□□ 2.8
COL2A1-203ENST00000465743 ADAMTSL3P82987 1691 aa32.53■■■□□ 2.8
COL2A1-203ENST00000465743 BCORL1Q5H9F3 1711 aa32.53■■■□□ 2.8
COL2A1-203ENST00000465743 EFCAB2Q5VUJ9 269 aa32.51■■■□□ 2.79
COL2A1-203ENST00000465743 LOC105371045A0A1W2PR82 267 aa32.48■■■□□ 2.79
COL2A1-203ENST00000465743 MADDQ8WXG6 1647 aa32.47■■■□□ 2.79
COL2A1-203ENST00000465743 ABCC1P33527 1531 aa32.45■■■□□ 2.78
COL2A1-203ENST00000465743 ARID4BQ4LE39 1312 aaPredicted RBP32.44■■■□□ 2.78
COL2A1-203ENST00000465743 MAGI2Q86UL8 1455 aa32.43■■■□□ 2.78
COL2A1-203ENST00000465743 ITSN2Q9NZM3 1697 aa32.43■■■□□ 2.78
COL2A1-203ENST00000465743 KDM5CP41229 1560 aa32.42■■■□□ 2.78
COL2A1-203ENST00000465743 ZNF518AQ6AHZ1 1483 aa32.41■■■□□ 2.78
COL2A1-203ENST00000465743 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
COL2A1-203ENST00000465743 HECW2Q9P2P5 1572 aa32.38■■■□□ 2.77
COL2A1-203ENST00000465743 RIMS1Q86UR5 1692 aaKnown RBP32.37■■■□□ 2.77
COL2A1-203ENST00000465743 SAMD9LQ8IVG5 1584 aa32.36■■■□□ 2.77
COL2A1-203ENST00000465743 PTPRMP28827 1452 aa32.35■■■□□ 2.77
COL2A1-203ENST00000465743 MTUS2Q5JR59 1369 aa32.35■■■□□ 2.77
COL2A1-203ENST00000465743 GPATCH8Q9UKJ3 1502 aaKnown RBP32.35■■■□□ 2.77
COL2A1-203ENST00000465743 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
COL2A1-203ENST00000465743 EHBP1L1Q8N3D4 1523 aa32.34■■■□□ 2.77
COL2A1-203ENST00000465743 TRAPPC8Q9Y2L5 1435 aa32.34■■■□□ 2.77
COL2A1-203ENST00000465743 ABCA6Q8N139 1617 aa32.32■■■□□ 2.76
COL2A1-203ENST00000465743 DIP2CQ9Y2E4 1556 aa32.31■■■□□ 2.76
COL2A1-203ENST00000465743 SYCP2Q9BX26 1530 aa32.3■■■□□ 2.76
COL2A1-203ENST00000465743 ATP10AO60312 1499 aa32.29■■■□□ 2.76
COL2A1-203ENST00000465743 TIAM1Q13009 1591 aa32.29■■■□□ 2.76
COL2A1-203ENST00000465743 C9orf84Q5VXU9 1444 aa32.29■■■□□ 2.76
COL2A1-203ENST00000465743 ZNF777Q9ULD5 760 aaPredicted RBP32.26■■■□□ 2.75
COL2A1-203ENST00000465743 FER1L4A9Z1Z3 1794 aa32.26■■■□□ 2.75
COL2A1-203ENST00000465743 CCNB3Q8WWL7 1395 aa32.24■■■□□ 2.75
COL2A1-203ENST00000465743 VPS8Q8N3P4 1428 aa32.24■■■□□ 2.75
COL2A1-203ENST00000465743 KIDINS220Q9ULH0 1771 aa32.23■■■□□ 2.75
COL2A1-203ENST00000465743 MLECQ14165 292 aa32.22■■■□□ 2.75
COL2A1-203ENST00000465743 MLH3Q9UHC1 1453 aa32.22■■■□□ 2.75
COL2A1-203ENST00000465743 MYT1LQ9UL68 1186 aa32.19■■■□□ 2.74
COL2A1-203ENST00000465743 SUPT6HQ7KZ85 1726 aaKnown RBP32.16■■■□□ 2.74
COL2A1-203ENST00000465743 REREQ9P2R6 1566 aa32.15■■■□□ 2.74
COL2A1-203ENST00000465743 CFDP1Q9UEE9 299 aaPredicted RBP32.15■■■□□ 2.74
COL2A1-203ENST00000465743 HNRNPMP52272 730 aaKnown RBP eCLIP32.13■■■□□ 2.73
COL2A1-203ENST00000465743 NCOA2Q15596 1464 aa32.13■■■□□ 2.73
COL2A1-203ENST00000465743 PLPPR3Q6T4P5 718 aa32.12■■■□□ 2.73
COL2A1-203ENST00000465743 INO80Q9ULG1 1556 aaPredicted RBP32.1■■■□□ 2.73
COL2A1-203ENST00000465743 PLEKHH2Q8IVE3 1493 aa32.1■■■□□ 2.73
COL2A1-203ENST00000465743 ZNF644Q9H582 1327 aaPredicted RBP32.09■■■□□ 2.73
COL2A1-203ENST00000465743 KIAA1107Q9UPP5 1409 aa32.08■■■□□ 2.73
COL2A1-203ENST00000465743 ATP7AQ04656 1500 aa32.07■■■□□ 2.72
COL2A1-203ENST00000465743 LRRC9Q6ZRR7 1453 aa32.05■■■□□ 2.72
COL2A1-203ENST00000465743 LMTK3Q96Q04 1460 aa32.03■■■□□ 2.72
COL2A1-203ENST00000465743 AGLP35573 1532 aa32.03■■■□□ 2.72
COL2A1-203ENST00000465743 SPAG9O60271 1321 aaKnown RBP32.02■■■□□ 2.72
COL2A1-203ENST00000465743 CAMSAP2Q08AD1 1489 aa31.99■■■□□ 2.71
COL2A1-203ENST00000465743 MBD5Q9P267 1494 aa31.99■■■□□ 2.71
COL2A1-203ENST00000465743 PLXNC1O60486 1568 aa31.96■■■□□ 2.71
COL2A1-203ENST00000465743 MAP3K1Q13233 1512 aa31.95■■■□□ 2.71
COL2A1-203ENST00000465743 KANK4Q5T7N3 995 aaPredicted RBP31.95■■■□□ 2.71
COL2A1-203ENST00000465743 C3P01024 1663 aa31.92■■■□□ 2.7
COL2A1-203ENST00000465743 CEBPAP49715 358 aaPredicted RBP31.91■■■□□ 2.7
COL2A1-203ENST00000465743 ADGBQ8N7X0 1667 aa31.9■■■□□ 2.7
COL2A1-203ENST00000465743 A2MP01023 1474 aa31.88■■■□□ 2.69
COL2A1-203ENST00000465743 CCDC141Q6ZP82 1450 aa31.88■■■□□ 2.69
COL2A1-203ENST00000465743 PREX1Q8TCU6 1659 aa31.87■■■□□ 2.69
COL2A1-203ENST00000465743 HSPA2P54652 639 aa31.84■■■□□ 2.69
COL2A1-203ENST00000465743 ARHGEF5Q12774 1597 aa31.81■■■□□ 2.68
COL2A1-203ENST00000465743 CLTCQ00610 1675 aaKnown RBP31.8■■■□□ 2.68
COL2A1-203ENST00000465743 RTEL1-TNFRSF6BF6WH68 1400 aa31.78■■■□□ 2.68
COL2A1-203ENST00000465743 MYOM3Q5VTT5 1437 aa31.78■■■□□ 2.68
COL2A1-203ENST00000465743 MROH2AA6NES4 1674 aa31.77■■■□□ 2.68
COL2A1-203ENST00000465743 ESF1Q9H501 851 aaKnown RBP31.74■■■□□ 2.67
COL2A1-203ENST00000465743 CNTLNQ9NXG0 1405 aa31.74■■■□□ 2.67
COL2A1-203ENST00000465743 MIA2Q96PC5 1412 aa31.68■■■□□ 2.66
COL2A1-203ENST00000465743 SETD1BQ9UPS6 1966 aaKnown RBP31.68■■■□□ 2.66
COL2A1-203ENST00000465743 UHRF1BP1Q6BDS2 1440 aa31.67■■■□□ 2.66
COL2A1-203ENST00000465743 APLP2Q06481 763 aa31.67■■■□□ 2.66
COL2A1-203ENST00000465743 GGT6Q6P531 493 aa31.67■■■□□ 2.66
COL2A1-203ENST00000465743 MAST1Q9Y2H9 1570 aa31.67■■■□□ 2.66
COL2A1-203ENST00000465743 DHX29Q7Z478 1369 aaKnown RBP31.67■■■□□ 2.66
COL2A1-203ENST00000465743 PTPN23Q9H3S7 1636 aa31.65■■■□□ 2.66
COL2A1-203ENST00000465743 CROCC2H7BZ55 1655 aa31.63■■■□□ 2.65
COL2A1-203ENST00000465743 ZMYM3Q14202 1370 aa31.62■■■□□ 2.65
COL2A1-203ENST00000465743 RSPH4AQ5TD94 716 aa31.61■■■□□ 2.65
COL2A1-203ENST00000465743 STRCQ7RTU9 1775 aa31.6■■■□□ 2.65
COL2A1-203ENST00000465743 TSPY4P0CV99 314 aa31.57■■■□□ 2.64
COL2A1-203ENST00000465743 TSPY10P0CW01 314 aa31.57■■■□□ 2.64
COL2A1-203ENST00000465743 FGD6Q6ZV73 1430 aa31.57■■■□□ 2.64
COL2A1-203ENST00000465743 MYO3AQ8NEV4 1616 aa31.57■■■□□ 2.64
COL2A1-203ENST00000465743 KIF3BO15066 747 aa31.56■■■□□ 2.64
COL2A1-203ENST00000465743 NPATQ14207 1427 aa31.56■■■□□ 2.64
COL2A1-203ENST00000465743 ILDR1Q86SU0 546 aaPredicted RBP31.55■■■□□ 2.64
COL2A1-203ENST00000465743 PTPRKQ15262 1439 aa31.53■■■□□ 2.64
COL2A1-203ENST00000465743 KDM5DQ9BY66 1539 aa31.53■■■□□ 2.64
COL2A1-203ENST00000465743 DNMT1P26358 1616 aaKnown RBP31.52■■■□□ 2.64
COL2A1-203ENST00000465743 RNF17Q9BXT8 1623 aaKnown RBP31.52■■■□□ 2.64
COL2A1-203ENST00000465743 TCOF1Q13428 1488 aaKnown RBP31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms