RNA–Protein interactions for RNA: ENST00000465653.1

ERCC6-205, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 733 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-205ENST00000465653 POGZQ7Z3K3 1410 aa21.53■■□□□ 1.04
ERCC6-205ENST00000465653 PCF11O94913 1555 aaKnown RBP21.53■■□□□ 1.04
ERCC6-205ENST00000465653 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
ERCC6-205ENST00000465653 MAGI2Q86UL8 1455 aa21.51■■□□□ 1.03
ERCC6-205ENST00000465653 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
ERCC6-205ENST00000465653 LMTK3Q96Q04 1460 aa21.5■■□□□ 1.03
ERCC6-205ENST00000465653 FER1L4A9Z1Z3 1794 aa21.47■■□□□ 1.03
ERCC6-205ENST00000465653 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
ERCC6-205ENST00000465653 CDK11AQ9UQ88 783 aaPredicted RBP21.43■■□□□ 1.02
ERCC6-205ENST00000465653 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
ERCC6-205ENST00000465653 CLIP1P30622 1438 aa21.42■■□□□ 1.02
ERCC6-205ENST00000465653 EFCAB2Q5VUJ9 269 aa21.4■■□□□ 1.02
ERCC6-205ENST00000465653 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
ERCC6-205ENST00000465653 KDM5CP41229 1560 aa21.4■■□□□ 1.02
ERCC6-205ENST00000465653 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.02
ERCC6-205ENST00000465653 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.02
ERCC6-205ENST00000465653 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
ERCC6-205ENST00000465653 ATP10AO60312 1499 aa21.39■■□□□ 1.01
ERCC6-205ENST00000465653 PREX2Q70Z35 1606 aa21.38■■□□□ 1.01
ERCC6-205ENST00000465653 MLECQ14165 292 aa21.38■■□□□ 1.01
ERCC6-205ENST00000465653 ARHGEF12Q9NZN5 1544 aa21.38■■□□□ 1.01
ERCC6-205ENST00000465653 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
ERCC6-205ENST00000465653 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
ERCC6-205ENST00000465653 DIP2CQ9Y2E4 1556 aa21.34■■□□□ 1.01
ERCC6-205ENST00000465653 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
ERCC6-205ENST00000465653 HSPA2P54652 639 aa21.32■■□□□ 1
ERCC6-205ENST00000465653 ABCC1P33527 1531 aa21.32■■□□□ 1
ERCC6-205ENST00000465653 ABCA6Q8N139 1617 aa21.32■■□□□ 1
ERCC6-205ENST00000465653 CDC42BPAQ5VT25 1732 aa21.31■■□□□ 1
ERCC6-205ENST00000465653 AFAP1Q8N556 730 aa21.3■■□□□ 1
ERCC6-205ENST00000465653 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
ERCC6-205ENST00000465653 PREX1Q8TCU6 1659 aa21.29■■□□□ 1
ERCC6-205ENST00000465653 REREQ9P2R6 1566 aa21.28■■□□□ 1
ERCC6-205ENST00000465653 FBXO41Q8TF61 875 aa21.28■■□□□ 1
ERCC6-205ENST00000465653 TRAPPC8Q9Y2L5 1435 aa21.26■□□□□ 0.99
ERCC6-205ENST00000465653 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
ERCC6-205ENST00000465653 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
ERCC6-205ENST00000465653 KIDINS220Q9ULH0 1771 aa21.23■□□□□ 0.99
ERCC6-205ENST00000465653 SAMD9LQ8IVG5 1584 aa21.2■□□□□ 0.98
ERCC6-205ENST00000465653 CEBPAP49715 358 aaPredicted RBP21.2■□□□□ 0.98
ERCC6-205ENST00000465653 AGLP35573 1532 aa21.19■□□□□ 0.98
ERCC6-205ENST00000465653 C3P01024 1663 aa21.19■□□□□ 0.98
ERCC6-205ENST00000465653 SYCP2Q9BX26 1530 aa21.18■□□□□ 0.98
ERCC6-205ENST00000465653 GPATCH8Q9UKJ3 1502 aaKnown RBP21.15■□□□□ 0.98
ERCC6-205ENST00000465653 UHRF1BP1Q6BDS2 1440 aa21.13■□□□□ 0.97
ERCC6-205ENST00000465653 STRCQ7RTU9 1775 aa21.13■□□□□ 0.97
ERCC6-205ENST00000465653 SETD1BQ9UPS6 1966 aaKnown RBP21.11■□□□□ 0.97
ERCC6-205ENST00000465653 ZNF777Q9ULD5 760 aaPredicted RBP21.11■□□□□ 0.97
ERCC6-205ENST00000465653 INO80Q9ULG1 1556 aaPredicted RBP21.1■□□□□ 0.97
ERCC6-205ENST00000465653 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
ERCC6-205ENST00000465653 ATP7AQ04656 1500 aa21.09■□□□□ 0.97
ERCC6-205ENST00000465653 MROH2AA6NES4 1674 aa21.06■□□□□ 0.96
ERCC6-205ENST00000465653 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
ERCC6-205ENST00000465653 CNTLNQ9NXG0 1405 aa21.05■□□□□ 0.96
ERCC6-205ENST00000465653 CERKQ8TCT0 537 aa21.05■□□□□ 0.96
ERCC6-205ENST00000465653 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
ERCC6-205ENST00000465653 MTUS2Q5JR59 1369 aa21.05■□□□□ 0.96
ERCC6-205ENST00000465653 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
ERCC6-205ENST00000465653 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
ERCC6-205ENST00000465653 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
ERCC6-205ENST00000465653 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
ERCC6-205ENST00000465653 EHBP1L1Q8N3D4 1523 aa21.04■□□□□ 0.96
ERCC6-205ENST00000465653 HNRNPMP52272 730 aaKnown RBP eCLIP21.04■□□□□ 0.96
ERCC6-205ENST00000465653 KIAA1107Q9UPP5 1409 aa21.04■□□□□ 0.96
ERCC6-205ENST00000465653 CFDP1Q9UEE9 299 aaPredicted RBP21.02■□□□□ 0.96
ERCC6-205ENST00000465653 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
ERCC6-205ENST00000465653 A2MP01023 1474 aa20.99■□□□□ 0.95
ERCC6-205ENST00000465653 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
ERCC6-205ENST00000465653 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
ERCC6-205ENST00000465653 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
ERCC6-205ENST00000465653 NPATQ14207 1427 aa20.96■□□□□ 0.95
ERCC6-205ENST00000465653 MYO3AQ8NEV4 1616 aa20.95■□□□□ 0.94
ERCC6-205ENST00000465653 PTPRTO14522 1441 aa20.95■□□□□ 0.94
ERCC6-205ENST00000465653 NCOA1Q15788 1441 aa20.95■□□□□ 0.94
ERCC6-205ENST00000465653 ZNF644Q9H582 1327 aaPredicted RBP20.94■□□□□ 0.94
ERCC6-205ENST00000465653 ZMYM3Q14202 1370 aa20.94■□□□□ 0.94
ERCC6-205ENST00000465653 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
ERCC6-205ENST00000465653 ZNF142P52746 1687 aaPredicted RBP20.93■□□□□ 0.94
ERCC6-205ENST00000465653 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
ERCC6-205ENST00000465653 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.93
ERCC6-205ENST00000465653 CEP170BQ9Y4F5 1589 aaPredicted RBP20.88■□□□□ 0.93
ERCC6-205ENST00000465653 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
ERCC6-205ENST00000465653 NCOA2Q15596 1464 aa20.88■□□□□ 0.93
ERCC6-205ENST00000465653 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
ERCC6-205ENST00000465653 GGT6Q6P531 493 aa20.87■□□□□ 0.93
ERCC6-205ENST00000465653 RTEL1-TNFRSF6BF6WH68 1400 aa20.86■□□□□ 0.93
ERCC6-205ENST00000465653 CCDC141Q6ZP82 1450 aa20.85■□□□□ 0.93
ERCC6-205ENST00000465653 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
ERCC6-205ENST00000465653 DHX29Q7Z478 1369 aaKnown RBP20.8■□□□□ 0.92
ERCC6-205ENST00000465653 ARHGEF5Q12774 1597 aa20.79■□□□□ 0.92
ERCC6-205ENST00000465653 NCKAP5LQ9HCH0 1330 aa20.78■□□□□ 0.92
ERCC6-205ENST00000465653 TCOF1Q13428 1488 aaKnown RBP20.78■□□□□ 0.92
ERCC6-205ENST00000465653 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
ERCC6-205ENST00000465653 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
ERCC6-205ENST00000465653 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
ERCC6-205ENST00000465653 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.91
ERCC6-205ENST00000465653 DNMT1P26358 1616 aaKnown RBP20.76■□□□□ 0.91
ERCC6-205ENST00000465653 FAM135AQ9P2D6 1515 aa20.76■□□□□ 0.91
ERCC6-205ENST00000465653 A2ML1A8K2U0 1454 aa20.75■□□□□ 0.91
ERCC6-205ENST00000465653 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms