RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CDC42BPAQ5VT25 1732 aa19.45■□□□□ 0.7
CHPF2-202ENST00000465601 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
CHPF2-202ENST00000465601 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
CHPF2-202ENST00000465601 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
CHPF2-202ENST00000465601 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
CHPF2-202ENST00000465601 PREX2Q70Z35 1606 aa19.41■□□□□ 0.7
CHPF2-202ENST00000465601 SUPT6HQ7KZ85 1726 aaKnown RBP19.4■□□□□ 0.7
CHPF2-202ENST00000465601 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
CHPF2-202ENST00000465601 ADGRL1O94910 1474 aa19.4■□□□□ 0.7
CHPF2-202ENST00000465601 SCAPERQ9BY12 1400 aa19.39■□□□□ 0.69
CHPF2-202ENST00000465601 DENND4BO75064 1496 aaPredicted RBP19.39■□□□□ 0.69
CHPF2-202ENST00000465601 NCOA2Q15596 1464 aa19.39■□□□□ 0.69
CHPF2-202ENST00000465601 CFDP1Q9UEE9 299 aaPredicted RBP19.38■□□□□ 0.69
CHPF2-202ENST00000465601 RICTORQ6R327 1708 aa19.35■□□□□ 0.69
CHPF2-202ENST00000465601 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
CHPF2-202ENST00000465601 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
CHPF2-202ENST00000465601 AFAP1Q8N556 730 aa19.31■□□□□ 0.68
CHPF2-202ENST00000465601 POGZQ7Z3K3 1410 aa19.31■□□□□ 0.68
CHPF2-202ENST00000465601 SAMD9LQ8IVG5 1584 aa19.31■□□□□ 0.68
CHPF2-202ENST00000465601 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
CHPF2-202ENST00000465601 ZNF644Q9H582 1327 aaPredicted RBP19.3■□□□□ 0.68
CHPF2-202ENST00000465601 HNRNPMP52272 730 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHPF2-202ENST00000465601 ABCC1P33527 1531 aa19.3■□□□□ 0.68
CHPF2-202ENST00000465601 TRAPPC8Q9Y2L5 1435 aa19.27■□□□□ 0.68
CHPF2-202ENST00000465601 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
CHPF2-202ENST00000465601 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
CHPF2-202ENST00000465601 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
CHPF2-202ENST00000465601 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
CHPF2-202ENST00000465601 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
CHPF2-202ENST00000465601 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
CHPF2-202ENST00000465601 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
CHPF2-202ENST00000465601 MYOM3Q5VTT5 1437 aa19.23■□□□□ 0.67
CHPF2-202ENST00000465601 YEATS2Q9ULM3 1422 aa19.22■□□□□ 0.67
CHPF2-202ENST00000465601 KDM5CP41229 1560 aa19.21■□□□□ 0.67
CHPF2-202ENST00000465601 MAGI2Q86UL8 1455 aa19.21■□□□□ 0.67
CHPF2-202ENST00000465601 ZFYVE16Q7Z3T8 1539 aa19.2■□□□□ 0.66
CHPF2-202ENST00000465601 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
CHPF2-202ENST00000465601 ARHGEF40Q8TER5 1519 aa19.19■□□□□ 0.66
CHPF2-202ENST00000465601 MIA2Q96PC5 1412 aa19.18■□□□□ 0.66
CHPF2-202ENST00000465601 MBD5Q9P267 1494 aa19.18■□□□□ 0.66
CHPF2-202ENST00000465601 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
CHPF2-202ENST00000465601 MLH3Q9UHC1 1453 aa19.17■□□□□ 0.66
CHPF2-202ENST00000465601 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
CHPF2-202ENST00000465601 KDM4FA0A1W2PPD8 638 aa19.16■□□□□ 0.66
CHPF2-202ENST00000465601 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
CHPF2-202ENST00000465601 ATP10AO60312 1499 aa19.15■□□□□ 0.66
CHPF2-202ENST00000465601 KIDINS220Q9ULH0 1771 aa19.14■□□□□ 0.66
CHPF2-202ENST00000465601 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
CHPF2-202ENST00000465601 FGD6Q6ZV73 1430 aa19.13■□□□□ 0.65
CHPF2-202ENST00000465601 PTPN23Q9H3S7 1636 aa19.12■□□□□ 0.65
CHPF2-202ENST00000465601 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
CHPF2-202ENST00000465601 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
CHPF2-202ENST00000465601 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 SIGLEC1Q9BZZ2 1709 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 ARHGEF5Q12774 1597 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
CHPF2-202ENST00000465601 INO80Q9ULG1 1556 aaPredicted RBP19.07■□□□□ 0.64
CHPF2-202ENST00000465601 MLECQ14165 292 aa19.07■□□□□ 0.64
CHPF2-202ENST00000465601 FAM50AQ14320 339 aaKnown RBP19.07■□□□□ 0.64
CHPF2-202ENST00000465601 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
CHPF2-202ENST00000465601 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
CHPF2-202ENST00000465601 RTEL1-TNFRSF6BF6WH68 1400 aa19.06■□□□□ 0.64
CHPF2-202ENST00000465601 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
CHPF2-202ENST00000465601 ABCC5O15440 1437 aa19.03■□□□□ 0.64
CHPF2-202ENST00000465601 REREQ9P2R6 1566 aa19.02■□□□□ 0.63
CHPF2-202ENST00000465601 A2MP01023 1474 aa19.01■□□□□ 0.63
CHPF2-202ENST00000465601 ADAMTSL3P82987 1691 aa19.01■□□□□ 0.63
CHPF2-202ENST00000465601 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
CHPF2-202ENST00000465601 DAPK1P53355 1430 aa19■□□□□ 0.63
CHPF2-202ENST00000465601 ADGBQ8N7X0 1667 aa18.99■□□□□ 0.63
CHPF2-202ENST00000465601 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
CHPF2-202ENST00000465601 MAST1Q9Y2H9 1570 aa18.98■□□□□ 0.63
CHPF2-202ENST00000465601 AGLP35573 1532 aa18.98■□□□□ 0.63
CHPF2-202ENST00000465601 DHX29Q7Z478 1369 aaKnown RBP18.97■□□□□ 0.63
CHPF2-202ENST00000465601 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
CHPF2-202ENST00000465601 MADDQ8WXG6 1647 aa18.96■□□□□ 0.63
CHPF2-202ENST00000465601 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
CHPF2-202ENST00000465601 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
CHPF2-202ENST00000465601 SHANK2Q9UPX8 1470 aa18.94■□□□□ 0.62
CHPF2-202ENST00000465601 ITGAEP38570 1179 aa18.93■□□□□ 0.62
CHPF2-202ENST00000465601 RIMS1Q86UR5 1692 aaKnown RBP18.92■□□□□ 0.62
CHPF2-202ENST00000465601 FER1L4A9Z1Z3 1794 aa18.92■□□□□ 0.62
CHPF2-202ENST00000465601 KIF3BO15066 747 aa18.92■□□□□ 0.62
CHPF2-202ENST00000465601 GGT6Q6P531 493 aa18.92■□□□□ 0.62
CHPF2-202ENST00000465601 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
CHPF2-202ENST00000465601 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
CHPF2-202ENST00000465601 PTPRMP28827 1452 aa18.9■□□□□ 0.62
CHPF2-202ENST00000465601 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
CHPF2-202ENST00000465601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.9■□□□□ 0.624e-15■■■□□ 14.7
CHPF2-202ENST00000465601 KIF15Q9NS87 1388 aa18.9■□□□□ 0.62
CHPF2-202ENST00000465601 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
CHPF2-202ENST00000465601 ESF1Q9H501 851 aaKnown RBP18.89■□□□□ 0.61
CHPF2-202ENST00000465601 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
CHPF2-202ENST00000465601 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
CHPF2-202ENST00000465601 CEBPAP49715 358 aaPredicted RBP18.85■□□□□ 0.61
CHPF2-202ENST00000465601 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
CHPF2-202ENST00000465601 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms