RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
THBS3-205ENST00000465596 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
THBS3-205ENST00000465596 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
THBS3-205ENST00000465596 ARHGEF40Q8TER5 1519 aa12.42□□□□□ -0.42
THBS3-205ENST00000465596 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
THBS3-205ENST00000465596 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
THBS3-205ENST00000465596 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
THBS3-205ENST00000465596 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
THBS3-205ENST00000465596 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
THBS3-205ENST00000465596 ARHGEF12Q9NZN5 1544 aa12.4□□□□□ -0.42
THBS3-205ENST00000465596 ADGRL1O94910 1474 aa12.39□□□□□ -0.43
THBS3-205ENST00000465596 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
THBS3-205ENST00000465596 CDK11AQ9UQ88 783 aaPredicted RBP12.38□□□□□ -0.43
THBS3-205ENST00000465596 KIDINS220Q9ULH0 1771 aa12.38□□□□□ -0.43
THBS3-205ENST00000465596 DENND4BO75064 1496 aaPredicted RBP12.37□□□□□ -0.43
THBS3-205ENST00000465596 NCOA2Q15596 1464 aa12.37□□□□□ -0.43
THBS3-205ENST00000465596 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
THBS3-205ENST00000465596 ABCA6Q8N139 1617 aa12.36□□□□□ -0.43
THBS3-205ENST00000465596 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
THBS3-205ENST00000465596 MTUS2Q5JR59 1369 aa12.35□□□□□ -0.43
THBS3-205ENST00000465596 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
THBS3-205ENST00000465596 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
THBS3-205ENST00000465596 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
THBS3-205ENST00000465596 BCORL1Q5H9F3 1711 aa12.34□□□□□ -0.43
THBS3-205ENST00000465596 SCAPERQ9BY12 1400 aa12.33□□□□□ -0.44
THBS3-205ENST00000465596 REREQ9P2R6 1566 aa12.33□□□□□ -0.44
THBS3-205ENST00000465596 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
THBS3-205ENST00000465596 ZFYVE16Q7Z3T8 1539 aa12.32□□□□□ -0.44
THBS3-205ENST00000465596 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
THBS3-205ENST00000465596 MAGI2Q86UL8 1455 aa12.32□□□□□ -0.44
THBS3-205ENST00000465596 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
THBS3-205ENST00000465596 ADGBQ8N7X0 1667 aa12.32□□□□□ -0.44
THBS3-205ENST00000465596 YEATS2Q9ULM3 1422 aa12.31□□□□□ -0.44
THBS3-205ENST00000465596 TRAPPC8Q9Y2L5 1435 aa12.31□□□□□ -0.44
THBS3-205ENST00000465596 MBD5Q9P267 1494 aa12.3□□□□□ -0.44
THBS3-205ENST00000465596 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
THBS3-205ENST00000465596 ARHGEF5Q12774 1597 aa12.3□□□□□ -0.44
THBS3-205ENST00000465596 MLH3Q9UHC1 1453 aa12.29□□□□□ -0.44
THBS3-205ENST00000465596 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
THBS3-205ENST00000465596 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
THBS3-205ENST00000465596 CAMSAP2Q08AD1 1489 aa12.28□□□□□ -0.44
THBS3-205ENST00000465596 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
THBS3-205ENST00000465596 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
THBS3-205ENST00000465596 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
THBS3-205ENST00000465596 ATP7AQ04656 1500 aa12.27□□□□□ -0.45
THBS3-205ENST00000465596 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
THBS3-205ENST00000465596 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
THBS3-205ENST00000465596 FER1L4A9Z1Z3 1794 aa12.25□□□□□ -0.45
THBS3-205ENST00000465596 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
THBS3-205ENST00000465596 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
THBS3-205ENST00000465596 MAST1Q9Y2H9 1570 aa12.25□□□□□ -0.45
THBS3-205ENST00000465596 TCOF1Q13428 1488 aaKnown RBP12.23□□□□□ -0.45
THBS3-205ENST00000465596 ZNF644Q9H582 1327 aaPredicted RBP12.23□□□□□ -0.45
THBS3-205ENST00000465596 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
THBS3-205ENST00000465596 ATP10AO60312 1499 aa12.22□□□□□ -0.45
THBS3-205ENST00000465596 C9orf84Q5VXU9 1444 aa12.22□□□□□ -0.45
THBS3-205ENST00000465596 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
THBS3-205ENST00000465596 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
THBS3-205ENST00000465596 AGLP35573 1532 aa12.21□□□□□ -0.45
THBS3-205ENST00000465596 AFAP1Q8N556 730 aa12.21□□□□□ -0.45
THBS3-205ENST00000465596 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
THBS3-205ENST00000465596 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
THBS3-205ENST00000465596 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
THBS3-205ENST00000465596 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
THBS3-205ENST00000465596 MROH2AA6NES4 1674 aa12.17□□□□□ -0.46
THBS3-205ENST00000465596 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
THBS3-205ENST00000465596 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
THBS3-205ENST00000465596 C3P01024 1663 aa12.16□□□□□ -0.46
THBS3-205ENST00000465596 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.46
THBS3-205ENST00000465596 EIF2AK4Q9P2K8 1649 aaKnown RBP12.15□□□□□ -0.46
THBS3-205ENST00000465596 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.47
THBS3-205ENST00000465596 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
THBS3-205ENST00000465596 DEPDC5O75140 1603 aa12.13□□□□□ -0.47
THBS3-205ENST00000465596 A2MP01023 1474 aa12.13□□□□□ -0.47
THBS3-205ENST00000465596 PTPRMP28827 1452 aa12.13□□□□□ -0.47
THBS3-205ENST00000465596 CLTCQ00610 1675 aaKnown RBP12.13□□□□□ -0.47
THBS3-205ENST00000465596 ABCC5O15440 1437 aa12.12□□□□□ -0.47
THBS3-205ENST00000465596 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
THBS3-205ENST00000465596 DAPK1P53355 1430 aa12.11□□□□□ -0.47
THBS3-205ENST00000465596 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
THBS3-205ENST00000465596 CEP152O94986 1710 aa12.08□□□□□ -0.47
THBS3-205ENST00000465596 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
THBS3-205ENST00000465596 PREX1Q8TCU6 1659 aa12.08□□□□□ -0.48
THBS3-205ENST00000465596 FAM135AQ9P2D6 1515 aa12.07□□□□□ -0.48
THBS3-205ENST00000465596 SETD1BQ9UPS6 1966 aaKnown RBP12.07□□□□□ -0.48
THBS3-205ENST00000465596 APLP2Q06481 763 aa12.07□□□□□ -0.48
THBS3-205ENST00000465596 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
THBS3-205ENST00000465596 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
THBS3-205ENST00000465596 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
THBS3-205ENST00000465596 RRBP1Q9P2E9 1410 aaKnown RBP12.06□□□□□ -0.48
THBS3-205ENST00000465596 RSPH4AQ5TD94 716 aa12.06□□□□□ -0.48
THBS3-205ENST00000465596 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
THBS3-205ENST00000465596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
THBS3-205ENST00000465596 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
THBS3-205ENST00000465596 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
THBS3-205ENST00000465596 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
THBS3-205ENST00000465596 KDM5DQ9BY66 1539 aa12.03□□□□□ -0.48
THBS3-205ENST00000465596 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
THBS3-205ENST00000465596 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
THBS3-205ENST00000465596 LMTK3Q96Q04 1460 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms