RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
XRN1-205ENST00000465507 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
XRN1-205ENST00000465507 TMEM92Q6UXU6 159 aa9.14□□□□□ -0.95
XRN1-205ENST00000465507 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
XRN1-205ENST00000465507 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
XRN1-205ENST00000465507 POTEB3A0JP26 581 aa9.1□□□□□ -0.95
XRN1-205ENST00000465507 FAM205CA6NFA0 338 aa9.1□□□□□ -0.95
XRN1-205ENST00000465507 NLRP6P59044 892 aa9.1□□□□□ -0.95
XRN1-205ENST00000465507 POTEBQ6S5H4 581 aa9.1□□□□□ -0.95
XRN1-205ENST00000465507 SPRYD3Q8NCJ5 442 aa9.09□□□□□ -0.95
XRN1-205ENST00000465507 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
XRN1-205ENST00000465507 DOK7Q18PE1 504 aa9.08□□□□□ -0.96
XRN1-205ENST00000465507 ZNF710Q8N1W2 664 aa9.08□□□□□ -0.96
XRN1-205ENST00000465507 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
XRN1-205ENST00000465507 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
XRN1-205ENST00000465507 PPP1R37O75864 691 aa9.05□□□□□ -0.96
XRN1-205ENST00000465507 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
XRN1-205ENST00000465507 SPNS2Q8IVW8 549 aa9.03□□□□□ -0.96
XRN1-205ENST00000465507 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
XRN1-205ENST00000465507 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
XRN1-205ENST00000465507 PLCB2Q00722 1185 aa9.02□□□□□ -0.97
XRN1-205ENST00000465507 RIMBP2O15034 1052 aa9.01□□□□□ -0.97
XRN1-205ENST00000465507 MMRN1Q13201 1228 aa9□□□□□ -0.97
XRN1-205ENST00000465507 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
XRN1-205ENST00000465507 RYDENQ9NUL5 291 aaKnown RBP9□□□□□ -0.97
XRN1-205ENST00000465507 ERBB3P21860 1342 aa8.99□□□□□ -0.97
XRN1-205ENST00000465507 ZSWIM6Q9HCJ5 1215 aa8.97□□□□□ -0.97
XRN1-205ENST00000465507 VARS2Q5ST30 1063 aaKnown RBP8.96□□□□□ -0.98
XRN1-205ENST00000465507 GPR153Q6NV75 609 aa8.96□□□□□ -0.98
XRN1-205ENST00000465507 C2orf72A6NCS6 295 aa8.95□□□□□ -0.98
XRN1-205ENST00000465507 TSHZ2Q9NRE2 1034 aa8.95□□□□□ -0.98
XRN1-205ENST00000465507 KIF3CO14782 793 aa8.94□□□□□ -0.98
XRN1-205ENST00000465507 ARSIQ5FYB1 569 aa8.94□□□□□ -0.98
XRN1-205ENST00000465507 KHSRPQ92945 711 aaKnown RBP eCLIP8.93□□□□□ -0.98
XRN1-205ENST00000465507 CADPS2Q86UW7 1296 aa8.89□□□□□ -0.99
XRN1-205ENST00000465507 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
XRN1-205ENST00000465507 ZNF687Q8N1G0 1237 aa8.86□□□□□ -0.99
XRN1-205ENST00000465507 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
XRN1-205ENST00000465507 NUDT7P0C024 238 aa8.85□□□□□ -0.99
XRN1-205ENST00000465507 LARP6Q9BRS8 491 aaKnown RBP8.83□□□□□ -1
XRN1-205ENST00000465507 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
XRN1-205ENST00000465507 SLC34A2O95436 690 aa8.81□□□□□ -1
XRN1-205ENST00000465507 WDR70Q9NW82 654 aa8.81□□□□□ -1
XRN1-205ENST00000465507 SLC24A1O60721 1099 aa8.8□□□□□ -1
XRN1-205ENST00000465507 PDE4AP27815 886 aa8.79□□□□□ -1
XRN1-205ENST00000465507 LHX6Q9UPM6 363 aa8.79□□□□□ -1
XRN1-205ENST00000465507 NCKAP5LQ9HCH0 1330 aa8.79□□□□□ -1
XRN1-205ENST00000465507 FOXK1P85037 733 aa8.76□□□□□ -1.01
XRN1-205ENST00000465507 DSG2Q14126 1118 aa8.76□□□□□ -1.01
XRN1-205ENST00000465507 PLPP6Q8IY26 295 aa8.76□□□□□ -1.01
XRN1-205ENST00000465507 RNF166Q96A37 237 aaPredicted RBP8.76□□□□□ -1.01
XRN1-205ENST00000465507 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
XRN1-205ENST00000465507 GPHNQ9NQX3 736 aaPredicted RBP8.76□□□□□ -1.01
XRN1-205ENST00000465507 ANKRD13DQ6ZTN6 518 aa8.75□□□□□ -1.01
XRN1-205ENST00000465507 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
XRN1-205ENST00000465507 LSM11P83369 360 aaKnown RBP eCLIP8.74□□□□□ -1.01
XRN1-205ENST00000465507 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
XRN1-205ENST00000465507 POTEEQ6S8J3 1075 aa8.74□□□□□ -1.01
XRN1-205ENST00000465507 KDM2AQ9Y2K7 1162 aa8.74□□□□□ -1.01
XRN1-205ENST00000465507 PTCD2Q8WV60 388 aaKnown RBP8.73□□□□□ -1.01
XRN1-205ENST00000465507 UPF1Q92900 1129 aaKnown RBP eCLIP8.73□□□□□ -1.01
XRN1-205ENST00000465507 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
XRN1-205ENST00000465507 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
XRN1-205ENST00000465507 KDM4FA0A1W2PPD8 638 aa8.72□□□□□ -1.01
XRN1-205ENST00000465507 PBX2P40425 430 aa8.7□□□□□ -1.02
XRN1-205ENST00000465507 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
XRN1-205ENST00000465507 PTGER2P43116 358 aa8.68□□□□□ -1.02
XRN1-205ENST00000465507 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.02
XRN1-205ENST00000465507 MFSD10Q14728 455 aa8.65□□□□□ -1.02
XRN1-205ENST00000465507 E2F4Q16254 413 aa8.65□□□□□ -1.02
XRN1-205ENST00000465507 OXER1Q8TDS5 423 aa8.64□□□□□ -1.03
XRN1-205ENST00000465507 ARHGAP33O14559 1287 aa8.63□□□□□ -1.03
XRN1-205ENST00000465507 TBC1D12O60347 775 aa8.63□□□□□ -1.03
XRN1-205ENST00000465507 DPYSL4O14531 572 aa8.62□□□□□ -1.03
XRN1-205ENST00000465507 PSEN2P49810 448 aa8.62□□□□□ -1.03
XRN1-205ENST00000465507 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
XRN1-205ENST00000465507 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
XRN1-205ENST00000465507 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
XRN1-205ENST00000465507 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
XRN1-205ENST00000465507 ADGRD1Q6QNK2 874 aa8.61□□□□□ -1.03
XRN1-205ENST00000465507 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
XRN1-205ENST00000465507 KCNK17Q96T54 332 aa8.58□□□□□ -1.04
XRN1-205ENST00000465507 ZNF454Q8N9F8 522 aa8.56□□□□□ -1.04
XRN1-205ENST00000465507 P3H3Q8IVL6 736 aa8.55□□□□□ -1.04
XRN1-205ENST00000465507 TK2O00142 265 aa8.54□□□□□ -1.04
XRN1-205ENST00000465507 HRO43593 1189 aa8.54□□□□□ -1.04
XRN1-205ENST00000465507 EVI5O60447 810 aa8.53□□□□□ -1.04
XRN1-205ENST00000465507 CAMK2BQ13554 666 aa8.53□□□□□ -1.04
XRN1-205ENST00000465507 FOSBP53539 338 aa8.52□□□□□ -1.05
XRN1-205ENST00000465507 KCNH8Q96L42 1107 aa8.52□□□□□ -1.05
XRN1-205ENST00000465507 GRXCR2A6NFK2 248 aa8.51□□□□□ -1.05
XRN1-205ENST00000465507 NBR1Q14596 966 aa8.51□□□□□ -1.05
XRN1-205ENST00000465507 DDX12PQ92771 950 aa8.51□□□□□ -1.05
XRN1-205ENST00000465507 BCL2L12Q9HB09 334 aa8.51□□□□□ -1.05
XRN1-205ENST00000465507 JPH4Q96JJ6 628 aa8.5□□□□□ -1.05
XRN1-205ENST00000465507 ANO8Q9HCE9 1232 aaPredicted RBP8.49□□□□□ -1.05
XRN1-205ENST00000465507 VPS9D1Q9Y2B5 631 aa8.49□□□□□ -1.05
XRN1-205ENST00000465507 SEMA3EO15041 775 aa8.48□□□□□ -1.05
XRN1-205ENST00000465507 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
XRN1-205ENST00000465507 HCSTQ9UBK5 93 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms