RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 MIA2Q96PC5 1412 aa20.48■□□□□ 0.87
ATF3-208ENST00000465155 PTPN23Q9H3S7 1636 aa20.48■□□□□ 0.87
ATF3-208ENST00000465155 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
ATF3-208ENST00000465155 ARHGAP5Q13017 1502 aa20.46■□□□□ 0.87
ATF3-208ENST00000465155 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
ATF3-208ENST00000465155 FAM69CQ0P6D2 419 aa20.45■□□□□ 0.87
ATF3-208ENST00000465155 MAP3K4Q9Y6R4 1608 aa20.45■□□□□ 0.86
ATF3-208ENST00000465155 PLCH2O75038 1416 aa20.45■□□□□ 0.86
ATF3-208ENST00000465155 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
ATF3-208ENST00000465155 FAM50AQ14320 339 aaKnown RBP20.43■□□□□ 0.86
ATF3-208ENST00000465155 ZNF777Q9ULD5 760 aaPredicted RBP20.42■□□□□ 0.86
ATF3-208ENST00000465155 ARAP3Q8WWN8 1544 aa20.42■□□□□ 0.86
ATF3-208ENST00000465155 TCOF1Q13428 1488 aaKnown RBP20.41■□□□□ 0.86
ATF3-208ENST00000465155 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
ATF3-208ENST00000465155 ZNF644Q9H582 1327 aaPredicted RBP20.4■□□□□ 0.86
ATF3-208ENST00000465155 SAMD9LQ8IVG5 1584 aa20.4■□□□□ 0.86
ATF3-208ENST00000465155 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
ATF3-208ENST00000465155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.38■□□□□ 0.856e-7■□□□□ 11.3
ATF3-208ENST00000465155 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
ATF3-208ENST00000465155 FANCAO15360 1455 aa20.37■□□□□ 0.85
ATF3-208ENST00000465155 PCGF6Q9BYE7 350 aa20.35■□□□□ 0.85
ATF3-208ENST00000465155 CFAP74Q9C0B2 1584 aa20.35■□□□□ 0.85
ATF3-208ENST00000465155 PPRC1Q5VV67 1664 aaKnown RBP20.34■□□□□ 0.85
ATF3-208ENST00000465155 ITGAEP38570 1179 aa20.33■□□□□ 0.84
ATF3-208ENST00000465155 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
ATF3-208ENST00000465155 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
ATF3-208ENST00000465155 ABCC1P33527 1531 aa20.31■□□□□ 0.84
ATF3-208ENST00000465155 SYCP2Q9BX26 1530 aa20.31■□□□□ 0.84
ATF3-208ENST00000465155 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
ATF3-208ENST00000465155 AKNAQ7Z591 1439 aa20.3■□□□□ 0.84
ATF3-208ENST00000465155 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.84
ATF3-208ENST00000465155 KIAA1107Q9UPP5 1409 aa20.28■□□□□ 0.84
ATF3-208ENST00000465155 ADGRL1O94910 1474 aa20.28■□□□□ 0.84
ATF3-208ENST00000465155 TEX14Q8IWB6 1497 aa20.28■□□□□ 0.84
ATF3-208ENST00000465155 NEO1Q92859 1461 aa20.28■□□□□ 0.84
ATF3-208ENST00000465155 DAPK1P53355 1430 aa20.27■□□□□ 0.84
ATF3-208ENST00000465155 ARHGEF5Q12774 1597 aa20.27■□□□□ 0.84
ATF3-208ENST00000465155 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
ATF3-208ENST00000465155 MBD5Q9P267 1494 aa20.27■□□□□ 0.84
ATF3-208ENST00000465155 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
ATF3-208ENST00000465155 ADRA2BP18089 450 aa20.27■□□□□ 0.83
ATF3-208ENST00000465155 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
ATF3-208ENST00000465155 ABCC5O15440 1437 aa20.25■□□□□ 0.83
ATF3-208ENST00000465155 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
ATF3-208ENST00000465155 SCAPERQ9BY12 1400 aa20.24■□□□□ 0.83
ATF3-208ENST00000465155 CCDC141Q6ZP82 1450 aa20.23■□□□□ 0.83
ATF3-208ENST00000465155 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
ATF3-208ENST00000465155 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
ATF3-208ENST00000465155 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
ATF3-208ENST00000465155 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
ATF3-208ENST00000465155 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
ATF3-208ENST00000465155 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
ATF3-208ENST00000465155 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
ATF3-208ENST00000465155 AFAP1Q8N556 730 aa20.16■□□□□ 0.82
ATF3-208ENST00000465155 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
ATF3-208ENST00000465155 ZNF518AQ6AHZ1 1483 aa20.16■□□□□ 0.82
ATF3-208ENST00000465155 C9orf84Q5VXU9 1444 aa20.16■□□□□ 0.82
ATF3-208ENST00000465155 POGZQ7Z3K3 1410 aa20.16■□□□□ 0.82
ATF3-208ENST00000465155 RICTORQ6R327 1708 aa20.15■□□□□ 0.82
ATF3-208ENST00000465155 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
ATF3-208ENST00000465155 ADGRL2O95490 1459 aa20.12■□□□□ 0.81
ATF3-208ENST00000465155 KDM5CP41229 1560 aa20.12■□□□□ 0.81
ATF3-208ENST00000465155 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
ATF3-208ENST00000465155 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
ATF3-208ENST00000465155 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
ATF3-208ENST00000465155 RRP7BPQ9NSQ0 103 aa20.11■□□□□ 0.81
ATF3-208ENST00000465155 FRMPD1Q5SYB0 1578 aa20.11■□□□□ 0.81
ATF3-208ENST00000465155 INO80Q9ULG1 1556 aaPredicted RBP20.1■□□□□ 0.81
ATF3-208ENST00000465155 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
ATF3-208ENST00000465155 ZFYVE16Q7Z3T8 1539 aa20.1■□□□□ 0.81
ATF3-208ENST00000465155 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
ATF3-208ENST00000465155 GCC2Q8IWJ2 1684 aa20.09■□□□□ 0.81
ATF3-208ENST00000465155 ATP7AQ04656 1500 aa20.09■□□□□ 0.81
ATF3-208ENST00000465155 HFM1A2PYH4 1435 aa20.08■□□□□ 0.81
ATF3-208ENST00000465155 HECW2Q9P2P5 1572 aa20.08■□□□□ 0.81
ATF3-208ENST00000465155 MYT1LQ9UL68 1186 aa20.08■□□□□ 0.8
ATF3-208ENST00000465155 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
ATF3-208ENST00000465155 PLXNC1O60486 1568 aa20.08■□□□□ 0.8
ATF3-208ENST00000465155 COL17A1Q9UMD9 1497 aaPredicted RBP20.08■□□□□ 0.8
ATF3-208ENST00000465155 NAIPQ13075 1403 aa20.07■□□□□ 0.8
ATF3-208ENST00000465155 KIDINS220Q9ULH0 1771 aa20.07■□□□□ 0.8
ATF3-208ENST00000465155 SETD5Q9C0A6 1442 aa20.06■□□□□ 0.8
ATF3-208ENST00000465155 MLH3Q9UHC1 1453 aa20.05■□□□□ 0.8
ATF3-208ENST00000465155 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
ATF3-208ENST00000465155 ZMYM4Q5VZL5 1548 aa20.04■□□□□ 0.8
ATF3-208ENST00000465155 KDM6BO15054 1643 aa20.04■□□□□ 0.8
ATF3-208ENST00000465155 KIF15Q9NS87 1388 aa20.04■□□□□ 0.8
ATF3-208ENST00000465155 RAB3GAP2Q9H2M9 1393 aa20.02■□□□□ 0.79
ATF3-208ENST00000465155 ABCA6Q8N139 1617 aa20■□□□□ 0.79
ATF3-208ENST00000465155 DUOX2Q9NRD8 1548 aa19.99■□□□□ 0.79
ATF3-208ENST00000465155 MAGI2Q86UL8 1455 aa19.98■□□□□ 0.79
ATF3-208ENST00000465155 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
ATF3-208ENST00000465155 DIP2CQ9Y2E4 1556 aa19.97■□□□□ 0.79
ATF3-208ENST00000465155 YEATS2Q9ULM3 1422 aa19.97■□□□□ 0.79
ATF3-208ENST00000465155 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
ATF3-208ENST00000465155 A2MP01023 1474 aa19.93■□□□□ 0.78
ATF3-208ENST00000465155 DHX29Q7Z478 1369 aaKnown RBP19.92■□□□□ 0.78
ATF3-208ENST00000465155 ARHGEF40Q8TER5 1519 aa19.92■□□□□ 0.78
ATF3-208ENST00000465155 HRCP23327 699 aa19.91■□□□□ 0.78
ATF3-208ENST00000465155 EIF2AK4Q9P2K8 1649 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms