RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 TAF3Q5VWG9 929 aa9.31□□□□□ -0.92
PBX1-204ENST00000465089 HOOK1Q9UJC3 728 aaKnown RBP9.31□□□□□ -0.92
PBX1-204ENST00000465089 POLR3GO15318 223 aaPredicted RBP9.31□□□□□ -0.92
PBX1-204ENST00000465089 DNTTIP2Q5QJE6 756 aaKnown RBP9.31□□□□□ -0.92
PBX1-204ENST00000465089 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
PBX1-204ENST00000465089 TNNT3P45378 269 aaPredicted RBP9.3□□□□□ -0.92
PBX1-204ENST00000465089 FAM114A2Q9NRY5 505 aa9.3□□□□□ -0.92
PBX1-204ENST00000465089 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
PBX1-204ENST00000465089 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
PBX1-204ENST00000465089 HOXA7P31268 230 aaPredicted RBP9.29□□□□□ -0.92
PBX1-204ENST00000465089 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
PBX1-204ENST00000465089 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
PBX1-204ENST00000465089 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
PBX1-204ENST00000465089 TPM1P09493 284 aa9.28□□□□□ -0.92
PBX1-204ENST00000465089 SMC4Q9NTJ3 1288 aa9.28□□□□□ -0.92
PBX1-204ENST00000465089 IPO7O95373 1038 aaKnown RBP9.28□□□□□ -0.92
PBX1-204ENST00000465089 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.92
PBX1-204ENST00000465089 TEX35Q5T0J7 233 aa9.27□□□□□ -0.93
PBX1-204ENST00000465089 WASHC2CQ9Y4E1 1318 aa9.27□□□□□ -0.93
PBX1-204ENST00000465089 NUDCQ9Y266 331 aa9.27□□□□□ -0.93
PBX1-204ENST00000465089 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
PBX1-204ENST00000465089 NACADO15069 1562 aa9.27□□□□□ -0.93
PBX1-204ENST00000465089 RRP12Q5JTH9 1297 aaKnown RBP9.27□□□□□ -0.93
PBX1-204ENST00000465089 KIF3BO15066 747 aa9.27□□□□□ -0.93
PBX1-204ENST00000465089 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
PBX1-204ENST00000465089 USP8P40818 1118 aa9.26□□□□□ -0.93
PBX1-204ENST00000465089 PTMAP06454 111 aaKnown RBP9.26□□□□□ -0.93
PBX1-204ENST00000465089 SH3BGRP55822 239 aaPredicted RBP9.26□□□□□ -0.93
PBX1-204ENST00000465089 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
PBX1-204ENST00000465089 VIMP08670 466 aaKnown RBP9.26□□□□□ -0.93
PBX1-204ENST00000465089 DESP17661 470 aa9.26□□□□□ -0.93
PBX1-204ENST00000465089 USH1CQ9Y6N9 552 aa9.25□□□□□ -0.93
PBX1-204ENST00000465089 NEFHP12036 1026 aa9.25□□□□□ -0.93
PBX1-204ENST00000465089 MAPK8IP3Q9UPT6 1336 aa9.25□□□□□ -0.93
PBX1-204ENST00000465089 ANKRD20A12PQ8NF67 263 aa9.25□□□□□ -0.93
PBX1-204ENST00000465089 STK11IPQ8N1F8 1099 aa9.25□□□□□ -0.93
PBX1-204ENST00000465089 GBP2P32456 591 aaPredicted RBP9.25□□□□□ -0.93
PBX1-204ENST00000465089 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
PBX1-204ENST00000465089 CCP110O43303 1012 aa9.24□□□□□ -0.93
PBX1-204ENST00000465089 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
PBX1-204ENST00000465089 ROCK2O75116 1388 aaKnown RBP9.24□□□□□ -0.93
PBX1-204ENST00000465089 CNGA1P29973 690 aa9.24□□□□□ -0.93
PBX1-204ENST00000465089 UACAQ9BZF9 1416 aa9.24□□□□□ -0.93
PBX1-204ENST00000465089 ARGLU1Q9NWB6 273 aaPredicted RBP9.24□□□□□ -0.93
PBX1-204ENST00000465089 LUC7LQ9NQ29 371 aaKnown RBP9.23□□□□□ -0.93
PBX1-204ENST00000465089 KANK1Q14678 1352 aa9.23□□□□□ -0.93
PBX1-204ENST00000465089 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
PBX1-204ENST00000465089 SEPT11Q9NVA2 429 aaKnown RBP9.23□□□□□ -0.93
PBX1-204ENST00000465089 CCDC191Q8NCU4 936 aa9.23□□□□□ -0.93
PBX1-204ENST00000465089 PPM1EQ8WY54 764 aa9.23□□□□□ -0.93
PBX1-204ENST00000465089 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
PBX1-204ENST00000465089 MNS1Q8NEH6 495 aa9.23□□□□□ -0.93
PBX1-204ENST00000465089 TSPYL1Q9H0U9 437 aa9.22□□□□□ -0.93
PBX1-204ENST00000465089 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
PBX1-204ENST00000465089 DCAF1Q9Y4B6 1507 aa9.21□□□□□ -0.93
PBX1-204ENST00000465089 ERCC4Q92889 916 aaPredicted RBP9.21□□□□□ -0.94
PBX1-204ENST00000465089 DDX12PQ92771 950 aa9.21□□□□□ -0.94
PBX1-204ENST00000465089 STAC3Q96MF2 364 aa9.21□□□□□ -0.94
PBX1-204ENST00000465089 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
PBX1-204ENST00000465089 ZNF710Q8N1W2 664 aa9.21□□□□□ -0.94
PBX1-204ENST00000465089 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.94
PBX1-204ENST00000465089 GBP4Q96PP9 640 aa9.21□□□□□ -0.94
PBX1-204ENST00000465089 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
PBX1-204ENST00000465089 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
PBX1-204ENST00000465089 PPP4R2Q9NY27 417 aa9.2□□□□□ -0.94
PBX1-204ENST00000465089 APPP05067 770 aa9.2□□□□□ -0.94
PBX1-204ENST00000465089 RABEP1Q15276 862 aa9.2□□□□□ -0.94
PBX1-204ENST00000465089 SKOR2Q2VWA4 1001 aaPredicted RBP9.2□□□□□ -0.94
PBX1-204ENST00000465089 STAG3Q9UJ98 1225 aa9.19□□□□□ -0.94
PBX1-204ENST00000465089 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.19□□□□□ -0.94
PBX1-204ENST00000465089 V9GYY5 206 aaPredicted RBP9.19□□□□□ -0.94
PBX1-204ENST00000465089 RTF1Q92541 710 aaKnown RBP9.18□□□□□ -0.94
PBX1-204ENST00000465089 AMOTL1Q8IY63 956 aa9.18□□□□□ -0.94
PBX1-204ENST00000465089 IQCEQ6IPM2 695 aa9.17□□□□□ -0.94
PBX1-204ENST00000465089 CNPY4Q8N129 248 aa9.17□□□□□ -0.94
PBX1-204ENST00000465089 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
PBX1-204ENST00000465089 ZNF526Q8TF50 670 aaPredicted RBP9.17□□□□□ -0.94
PBX1-204ENST00000465089 SEC63Q9UGP8 760 aaKnown RBP9.17□□□□□ -0.94
PBX1-204ENST00000465089 ZBTB7CA1YPR0 619 aa9.17□□□□□ -0.94
PBX1-204ENST00000465089 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
PBX1-204ENST00000465089 CCDC47Q96A33 483 aaKnown RBP9.16□□□□□ -0.94
PBX1-204ENST00000465089 GOLGA6L10A0A0M3HER8 536 aa9.16□□□□□ -0.94
PBX1-204ENST00000465089 GNL2Q13823 731 aaKnown RBP9.16□□□□□ -0.94
PBX1-204ENST00000465089 MAPK8IP2Q13387 824 aaPredicted RBP9.16□□□□□ -0.94
PBX1-204ENST00000465089 KTN1Q86UP2 1357 aaKnown RBP9.15□□□□□ -0.94
PBX1-204ENST00000465089 CCDC66A2RUB6 948 aa9.15□□□□□ -0.94
PBX1-204ENST00000465089 TSPY4P0CV99 314 aa9.15□□□□□ -0.94
PBX1-204ENST00000465089 TSPY10P0CW01 314 aa9.15□□□□□ -0.94
PBX1-204ENST00000465089 FAM193AP78312 1265 aa9.15□□□□□ -0.94
PBX1-204ENST00000465089 ISY1Q9ULR0 285 aaKnown RBP9.15□□□□□ -0.94
PBX1-204ENST00000465089 GOLGA3Q08378 1498 aa9.15□□□□□ -0.94
PBX1-204ENST00000465089 TUBB4BP68371 445 aa9.15□□□□□ -0.94
PBX1-204ENST00000465089 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
PBX1-204ENST00000465089 EZRP15311 586 aaKnown RBP9.14□□□□□ -0.95
PBX1-204ENST00000465089 VGFO15240 615 aaPredicted RBP9.14□□□□□ -0.95
PBX1-204ENST00000465089 TRIM52Q96A61 297 aa9.14□□□□□ -0.95
PBX1-204ENST00000465089 AK7Q96M32 723 aa9.13□□□□□ -0.95
PBX1-204ENST00000465089 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
PBX1-204ENST00000465089 SSFA2P28290 1259 aa9.13□□□□□ -0.95
PBX1-204ENST00000465089 FTSJ3Q8IY81 847 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms