RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 EFCAB2Q5VUJ9 269 aa41.82■■■■■ 4.29
U2AF1-206ENST00000464750 ADAMTSL3P82987 1691 aa41.81■■■■■ 4.28
U2AF1-206ENST00000464750 ZFYVE16Q7Z3T8 1539 aa41.81■■■■■ 4.28
U2AF1-206ENST00000464750 BCORL1Q5H9F3 1711 aa41.8■■■■■ 4.28
U2AF1-206ENST00000464750 CDC42BPBQ9Y5S2 1711 aa41.79■■■■■ 4.28
U2AF1-206ENST00000464750 PREX2Q70Z35 1606 aa41.78■■■■■ 4.28
U2AF1-206ENST00000464750 MAGI2Q86UL8 1455 aa41.76■■■■■ 4.28
U2AF1-206ENST00000464750 CEP162Q5TB80 1403 aa41.75■■■■■ 4.27
U2AF1-206ENST00000464750 YEATS2Q9ULM3 1422 aa41.73■■■■■ 4.27
U2AF1-206ENST00000464750 ARID4BQ4LE39 1312 aaPredicted RBP41.72■■■■■ 4.27
U2AF1-206ENST00000464750 CDC42BPAQ5VT25 1732 aa41.69■■■■■ 4.27
U2AF1-206ENST00000464750 MADDQ8WXG6 1647 aa41.67■■■■■ 4.26
U2AF1-206ENST00000464750 SIGLEC1Q9BZZ2 1709 aa41.66■■■■■ 4.26
U2AF1-206ENST00000464750 ZNF518AQ6AHZ1 1483 aa41.65■■■■■ 4.26
U2AF1-206ENST00000464750 HECW2Q9P2P5 1572 aa41.64■■■■■ 4.26
U2AF1-206ENST00000464750 KDM5CP41229 1560 aa41.62■■■■■ 4.25
U2AF1-206ENST00000464750 PTPRMP28827 1452 aa41.61■■■■■ 4.25
U2AF1-206ENST00000464750 ABCC1P33527 1531 aa41.61■■■■■ 4.25
U2AF1-206ENST00000464750 ITSN2Q9NZM3 1697 aa41.58■■■■■ 4.25
U2AF1-206ENST00000464750 RIMS1Q86UR5 1692 aaKnown RBP41.55■■■■■ 4.24
U2AF1-206ENST00000464750 ATP10AO60312 1499 aa41.52■■■■■ 4.24
U2AF1-206ENST00000464750 ARHGEF12Q9NZN5 1544 aa41.51■■■■■ 4.24
U2AF1-206ENST00000464750 C9orf84Q5VXU9 1444 aa41.51■■■■■ 4.24
U2AF1-206ENST00000464750 MTUS2Q5JR59 1369 aa41.5■■■■■ 4.23
U2AF1-206ENST00000464750 AFAP1Q8N556 730 aa41.5■■■■■ 4.23
U2AF1-206ENST00000464750 GPATCH8Q9UKJ3 1502 aaKnown RBP41.48■■■■■ 4.23
U2AF1-206ENST00000464750 EHBP1L1Q8N3D4 1523 aa41.46■■■■■ 4.23
U2AF1-206ENST00000464750 SAMD9LQ8IVG5 1584 aa41.46■■■■■ 4.23
U2AF1-206ENST00000464750 TRAPPC8Q9Y2L5 1435 aa41.45■■■■■ 4.23
U2AF1-206ENST00000464750 LOC105371045A0A1W2PR82 267 aa41.45■■■■■ 4.23
U2AF1-206ENST00000464750 DIP2CQ9Y2E4 1556 aa41.45■■■■■ 4.23
U2AF1-206ENST00000464750 FER1L4A9Z1Z3 1794 aa41.42■■■■■ 4.22
U2AF1-206ENST00000464750 ABCA6Q8N139 1617 aa41.42■■■■■ 4.22
U2AF1-206ENST00000464750 MLH3Q9UHC1 1453 aa41.41■■■■■ 4.22
U2AF1-206ENST00000464750 MYT1LQ9UL68 1186 aa41.4■■■■■ 4.22
U2AF1-206ENST00000464750 CCNB3Q8WWL7 1395 aa41.38■■■■■ 4.22
U2AF1-206ENST00000464750 SYCP2Q9BX26 1530 aa41.38■■■■■ 4.21
U2AF1-206ENST00000464750 MLECQ14165 292 aa41.37■■■■■ 4.21
U2AF1-206ENST00000464750 ZNF777Q9ULD5 760 aaPredicted RBP41.37■■■■■ 4.21
U2AF1-206ENST00000464750 TIAM1Q13009 1591 aa41.35■■■■■ 4.21
U2AF1-206ENST00000464750 REREQ9P2R6 1566 aa41.35■■■■■ 4.21
U2AF1-206ENST00000464750 KIDINS220Q9ULH0 1771 aa41.33■■■■■ 4.21
U2AF1-206ENST00000464750 CFDP1Q9UEE9 299 aaPredicted RBP41.29■■■■■ 4.2
U2AF1-206ENST00000464750 VPS8Q8N3P4 1428 aa41.28■■■■■ 4.2
U2AF1-206ENST00000464750 PLEKHH2Q8IVE3 1493 aa41.28■■■■■ 4.2
U2AF1-206ENST00000464750 KIAA1107Q9UPP5 1409 aa41.24■■■■■ 4.19
U2AF1-206ENST00000464750 SUPT6HQ7KZ85 1726 aaKnown RBP41.24■■■■■ 4.19
U2AF1-206ENST00000464750 HNRNPMP52272 730 aaKnown RBP eCLIP41.2■■■■■ 4.19
U2AF1-206ENST00000464750 PLPPR3Q6T4P5 718 aa41.2■■■■■ 4.19
U2AF1-206ENST00000464750 AGLP35573 1532 aa41.18■■■■■ 4.18
U2AF1-206ENST00000464750 LMTK3Q96Q04 1460 aa41.17■■■■■ 4.18
U2AF1-206ENST00000464750 NCOA2Q15596 1464 aa41.16■■■■■ 4.18
U2AF1-206ENST00000464750 INO80Q9ULG1 1556 aaPredicted RBP41.16■■■■■ 4.18
U2AF1-206ENST00000464750 ATP7AQ04656 1500 aa41.14■■■■■ 4.18
U2AF1-206ENST00000464750 SPAG9O60271 1321 aaKnown RBP41.14■■■■■ 4.18
U2AF1-206ENST00000464750 ZNF644Q9H582 1327 aaPredicted RBP41.08■■■■■ 4.17
U2AF1-206ENST00000464750 LRRC9Q6ZRR7 1453 aa41.06■■■■■ 4.16
U2AF1-206ENST00000464750 MBD5Q9P267 1494 aa41.02■■■■■ 4.16
U2AF1-206ENST00000464750 MAP3K1Q13233 1512 aa41.01■■■■■ 4.16
U2AF1-206ENST00000464750 PLXNC1O60486 1568 aa40.99■■■■■ 4.15
U2AF1-206ENST00000464750 CAMSAP2Q08AD1 1489 aa40.99■■■■■ 4.15
U2AF1-206ENST00000464750 PREX1Q8TCU6 1659 aa40.98■■■■■ 4.15
U2AF1-206ENST00000464750 CEBPAP49715 358 aaPredicted RBP40.96■■■■■ 4.15
U2AF1-206ENST00000464750 C3P01024 1663 aa40.96■■■■■ 4.15
U2AF1-206ENST00000464750 ADGBQ8N7X0 1667 aa40.96■■■■■ 4.15
U2AF1-206ENST00000464750 A2MP01023 1474 aa40.96■■■■■ 4.15
U2AF1-206ENST00000464750 CCDC141Q6ZP82 1450 aa40.9■■■■■ 4.14
U2AF1-206ENST00000464750 ESF1Q9H501 851 aaKnown RBP40.9■■■■■ 4.14
U2AF1-206ENST00000464750 HSPA2P54652 639 aa40.89■■■■■ 4.14
U2AF1-206ENST00000464750 CNTLNQ9NXG0 1405 aa40.87■■■■■ 4.13
U2AF1-206ENST00000464750 KANK4Q5T7N3 995 aaPredicted RBP40.87■■■■■ 4.13
U2AF1-206ENST00000464750 RTEL1-TNFRSF6BF6WH68 1400 aa40.86■■■■■ 4.13
U2AF1-206ENST00000464750 MROH2AA6NES4 1674 aa40.85■■■■■ 4.13
U2AF1-206ENST00000464750 SETD1BQ9UPS6 1966 aaKnown RBP40.83■■■■■ 4.13
U2AF1-206ENST00000464750 ARHGEF5Q12774 1597 aa40.82■■■■■ 4.13
U2AF1-206ENST00000464750 CLTCQ00610 1675 aaKnown RBP40.78■■■■■ 4.12
U2AF1-206ENST00000464750 UHRF1BP1Q6BDS2 1440 aa40.77■■■■■ 4.12
U2AF1-206ENST00000464750 RSPH4AQ5TD94 716 aa40.75■■■■■ 4.11
U2AF1-206ENST00000464750 MYOM3Q5VTT5 1437 aa40.74■■■■■ 4.11
U2AF1-206ENST00000464750 APLP2Q06481 763 aa40.7■■■■■ 4.11
U2AF1-206ENST00000464750 MIA2Q96PC5 1412 aa40.69■■■■■ 4.1
U2AF1-206ENST00000464750 DHX29Q7Z478 1369 aaKnown RBP40.69■■■■■ 4.1
U2AF1-206ENST00000464750 GGT6Q6P531 493 aa40.68■■■■■ 4.1
U2AF1-206ENST00000464750 ILDR1Q86SU0 546 aaPredicted RBP40.67■■■■■ 4.1
U2AF1-206ENST00000464750 ZMYM3Q14202 1370 aa40.65■■■■■ 4.1
U2AF1-206ENST00000464750 MAST1Q9Y2H9 1570 aa40.64■■■■■ 4.1
U2AF1-206ENST00000464750 NPATQ14207 1427 aa40.62■■■■■ 4.09
U2AF1-206ENST00000464750 TSPY4P0CV99 314 aa40.62■■■■■ 4.09
U2AF1-206ENST00000464750 TSPY10P0CW01 314 aa40.62■■■■■ 4.09
U2AF1-206ENST00000464750 STRCQ7RTU9 1775 aa40.58■■■■■ 4.09
U2AF1-206ENST00000464750 PPP6R1Q9UPN7 881 aa40.56■■■■■ 4.08
U2AF1-206ENST00000464750 PTPN23Q9H3S7 1636 aa40.53■■■■■ 4.08
U2AF1-206ENST00000464750 KIF3BO15066 747 aa40.53■■■■■ 4.08
U2AF1-206ENST00000464750 MYO3AQ8NEV4 1616 aa40.5■■■■■ 4.07
U2AF1-206ENST00000464750 FAM135AQ9P2D6 1515 aa40.5■■■■■ 4.07
U2AF1-206ENST00000464750 PTPRKQ15262 1439 aa40.5■■■■■ 4.07
U2AF1-206ENST00000464750 CROCC2H7BZ55 1655 aa40.49■■■■■ 4.07
U2AF1-206ENST00000464750 KDM5DQ9BY66 1539 aa40.48■■■■■ 4.07
U2AF1-206ENST00000464750 ZNF142P52746 1687 aaPredicted RBP40.46■■■■■ 4.07
U2AF1-206ENST00000464750 FGD6Q6ZV73 1430 aa40.43■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms