RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 CDC42BPBQ9Y5S2 1711 aa31.54■■■□□ 2.64
CDK11A-211ENST00000464748 LRRC9Q6ZRR7 1453 aa31.53■■■□□ 2.64
CDK11A-211ENST00000464748 SUPT6HQ7KZ85 1726 aaKnown RBP31.52■■■□□ 2.64
CDK11A-211ENST00000464748 CCNB3Q8WWL7 1395 aa31.49■■■□□ 2.63
CDK11A-211ENST00000464748 ADGRL1O94910 1474 aa31.48■■■□□ 2.63
CDK11A-211ENST00000464748 GPATCH8Q9UKJ3 1502 aaKnown RBP31.48■■■□□ 2.63
CDK11A-211ENST00000464748 DENND4BO75064 1496 aaPredicted RBP31.47■■■□□ 2.63
CDK11A-211ENST00000464748 ITSN2Q9NZM3 1697 aa31.45■■■□□ 2.63
CDK11A-211ENST00000464748 NCOA2Q15596 1464 aa31.44■■■□□ 2.62
CDK11A-211ENST00000464748 RICTORQ6R327 1708 aa31.43■■■□□ 2.62
CDK11A-211ENST00000464748 FRMPD1Q5SYB0 1578 aa31.42■■■□□ 2.62
CDK11A-211ENST00000464748 SCAPERQ9BY12 1400 aa31.41■■■□□ 2.62
CDK11A-211ENST00000464748 RAPGEF3O95398 923 aa31.38■■■□□ 2.61
CDK11A-211ENST00000464748 KANK4Q5T7N3 995 aaPredicted RBP31.38■■■□□ 2.61
CDK11A-211ENST00000464748 POGZQ7Z3K3 1410 aa31.38■■■□□ 2.61
CDK11A-211ENST00000464748 CFDP1Q9UEE9 299 aaPredicted RBP31.37■■■□□ 2.61
CDK11A-211ENST00000464748 ABCC1P33527 1531 aa31.37■■■□□ 2.61
CDK11A-211ENST00000464748 ZMYM4Q5VZL5 1548 aa31.35■■■□□ 2.61
CDK11A-211ENST00000464748 PLEKHH2Q8IVE3 1493 aa31.34■■■□□ 2.61
CDK11A-211ENST00000464748 SAMD9LQ8IVG5 1584 aa31.33■■■□□ 2.61
CDK11A-211ENST00000464748 ZNF518AQ6AHZ1 1483 aa31.33■■■□□ 2.61
CDK11A-211ENST00000464748 MAGI2Q86UL8 1455 aa31.3■■■□□ 2.6
CDK11A-211ENST00000464748 KIAA1107Q9UPP5 1409 aa31.29■■■□□ 2.6
CDK11A-211ENST00000464748 ZNF777Q9ULD5 760 aaPredicted RBP31.28■■■□□ 2.6
CDK11A-211ENST00000464748 KDM5CP41229 1560 aa31.26■■■□□ 2.6
CDK11A-211ENST00000464748 ARHGEF40Q8TER5 1519 aa31.24■■■□□ 2.59
CDK11A-211ENST00000464748 ARHGEF12Q9NZN5 1544 aa31.24■■■□□ 2.59
CDK11A-211ENST00000464748 SYCP2Q9BX26 1530 aa31.24■■■□□ 2.59
CDK11A-211ENST00000464748 MYOM3Q5VTT5 1437 aa31.22■■■□□ 2.59
CDK11A-211ENST00000464748 ZFYVE16Q7Z3T8 1539 aa31.21■■■□□ 2.59
CDK11A-211ENST00000464748 MIA2Q96PC5 1412 aa31.2■■■□□ 2.59
CDK11A-211ENST00000464748 TRAPPC8Q9Y2L5 1435 aa31.2■■■□□ 2.59
CDK11A-211ENST00000464748 HECW2Q9P2P5 1572 aa31.18■■■□□ 2.58
CDK11A-211ENST00000464748 AFAP1Q8N556 730 aa31.17■■■□□ 2.58
CDK11A-211ENST00000464748 CAMSAP2Q08AD1 1489 aa31.16■■■□□ 2.58
CDK11A-211ENST00000464748 MLH3Q9UHC1 1453 aa31.16■■■□□ 2.58
CDK11A-211ENST00000464748 HNRNPMP52272 730 aaKnown RBP eCLIP31.13■■■□□ 2.57
CDK11A-211ENST00000464748 ZNF644Q9H582 1327 aaPredicted RBP31.13■■■□□ 2.57
CDK11A-211ENST00000464748 YEATS2Q9ULM3 1422 aa31.12■■■□□ 2.57
CDK11A-211ENST00000464748 MBD5Q9P267 1494 aa31.11■■■□□ 2.57
CDK11A-211ENST00000464748 RSPH4AQ5TD94 716 aa31.1■■■□□ 2.57
CDK11A-211ENST00000464748 ARHGEF5Q12774 1597 aa31.08■■■□□ 2.57
CDK11A-211ENST00000464748 ATP10AO60312 1499 aa31.07■■■□□ 2.56
CDK11A-211ENST00000464748 MYT1LQ9UL68 1186 aa31.06■■■□□ 2.56
CDK11A-211ENST00000464748 CCDC141Q6ZP82 1450 aa31.06■■■□□ 2.56
CDK11A-211ENST00000464748 KIDINS220Q9ULH0 1771 aa31.05■■■□□ 2.56
CDK11A-211ENST00000464748 SPAG9O60271 1321 aaKnown RBP31.05■■■□□ 2.56
CDK11A-211ENST00000464748 C9orf84Q5VXU9 1444 aa31.05■■■□□ 2.56
CDK11A-211ENST00000464748 FGD6Q6ZV73 1430 aa31.05■■■□□ 2.56
CDK11A-211ENST00000464748 PTPN23Q9H3S7 1636 aa31.03■■■□□ 2.56
CDK11A-211ENST00000464748 INO80Q9ULG1 1556 aaPredicted RBP31.03■■■□□ 2.56
CDK11A-211ENST00000464748 DIP2CQ9Y2E4 1556 aa31.03■■■□□ 2.56
CDK11A-211ENST00000464748 REREQ9P2R6 1566 aa31.02■■■□□ 2.56
CDK11A-211ENST00000464748 ATP7AQ04656 1500 aa31.02■■■□□ 2.56
CDK11A-211ENST00000464748 ABCA6Q8N139 1617 aa31.02■■■□□ 2.56
CDK11A-211ENST00000464748 RTEL1-TNFRSF6BF6WH68 1400 aa30.99■■■□□ 2.55
CDK11A-211ENST00000464748 TCOF1Q13428 1488 aaKnown RBP30.99■■■□□ 2.55
CDK11A-211ENST00000464748 ARID4BQ4LE39 1312 aaPredicted RBP30.96■■■□□ 2.55
CDK11A-211ENST00000464748 KDM4FA0A1W2PPD8 638 aa30.94■■■□□ 2.54
CDK11A-211ENST00000464748 BCORL1Q5H9F3 1711 aa30.93■■■□□ 2.54
CDK11A-211ENST00000464748 TSPY4P0CV99 314 aa30.92■■■□□ 2.54
CDK11A-211ENST00000464748 TSPY10P0CW01 314 aa30.92■■■□□ 2.54
CDK11A-211ENST00000464748 MAST1Q9Y2H9 1570 aa30.91■■■□□ 2.54
CDK11A-211ENST00000464748 ADGBQ8N7X0 1667 aa30.9■■■□□ 2.54
CDK11A-211ENST00000464748 SIGLEC1Q9BZZ2 1709 aa30.9■■■□□ 2.54
CDK11A-211ENST00000464748 AGLP35573 1532 aa30.89■■■□□ 2.54
CDK11A-211ENST00000464748 ADAMTSL3P82987 1691 aa30.87■■■□□ 2.53
CDK11A-211ENST00000464748 DNMT1P26358 1616 aaKnown RBP30.87■■■□□ 2.53
CDK11A-211ENST00000464748 SHANK2Q9UPX8 1470 aa30.86■■■□□ 2.53
CDK11A-211ENST00000464748 CROCC2H7BZ55 1655 aa30.86■■■□□ 2.53
CDK11A-211ENST00000464748 A2MP01023 1474 aa30.84■■■□□ 2.53
CDK11A-211ENST00000464748 PPARGC1BQ86YN6 1023 aaKnown RBP30.84■■■□□ 2.53
CDK11A-211ENST00000464748 PLXNC1O60486 1568 aa30.83■■■□□ 2.53
CDK11A-211ENST00000464748 ABCC5O15440 1437 aa30.81■■■□□ 2.52
CDK11A-211ENST00000464748 DAPK1P53355 1430 aa30.81■■■□□ 2.52
CDK11A-211ENST00000464748 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
CDK11A-211ENST00000464748 FAM50AQ14320 339 aaKnown RBP30.78■■■□□ 2.52
CDK11A-211ENST00000464748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.77■■■□□ 2.52
CDK11A-211ENST00000464748 MADDQ8WXG6 1647 aa30.76■■■□□ 2.52
CDK11A-211ENST00000464748 DHX29Q7Z478 1369 aaKnown RBP30.76■■■□□ 2.51
CDK11A-211ENST00000464748 FER1L4A9Z1Z3 1794 aa30.73■■■□□ 2.51
CDK11A-211ENST00000464748 MLECQ14165 292 aa30.72■■■□□ 2.51
CDK11A-211ENST00000464748 RRBP1Q9P2E9 1410 aaKnown RBP30.71■■■□□ 2.51
CDK11A-211ENST00000464748 RIMS1Q86UR5 1692 aaKnown RBP30.68■■■□□ 2.5
CDK11A-211ENST00000464748 PTPRMP28827 1452 aa30.67■■■□□ 2.5
CDK11A-211ENST00000464748 DUOX2Q9NRD8 1548 aa30.67■■■□□ 2.5
CDK11A-211ENST00000464748 ANKRD30AQ9BXX3 1397 aa30.66■■■□□ 2.5
CDK11A-211ENST00000464748 ADGRL2O95490 1459 aa30.65■■■□□ 2.5
CDK11A-211ENST00000464748 EIF2AK4Q9P2K8 1649 aaKnown RBP30.64■■■□□ 2.5
CDK11A-211ENST00000464748 KIF15Q9NS87 1388 aa30.64■■■□□ 2.5
CDK11A-211ENST00000464748 PPP6R1Q9UPN7 881 aa30.63■■■□□ 2.49
CDK11A-211ENST00000464748 CNTLNQ9NXG0 1405 aa30.62■■■□□ 2.49
CDK11A-211ENST00000464748 NCOA1Q15788 1441 aa30.6■■■□□ 2.49
CDK11A-211ENST00000464748 ESF1Q9H501 851 aaKnown RBP30.6■■■□□ 2.49
CDK11A-211ENST00000464748 ERBINQ96RT1 1412 aa30.59■■■□□ 2.49
CDK11A-211ENST00000464748 FAM135AQ9P2D6 1515 aa30.58■■■□□ 2.49
CDK11A-211ENST00000464748 KIF3BO15066 747 aa30.58■■■□□ 2.49
CDK11A-211ENST00000464748 CHIC2Q9UKJ5 165 aa30.58■■■□□ 2.49
CDK11A-211ENST00000464748 RRP7BPQ9NSQ0 103 aa30.57■■■□□ 2.48
CDK11A-211ENST00000464748 ROCK1Q13464 1354 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms