RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 ST18O60284 1047 aa12.88□□□□□ -0.35
NUP188-202ENST00000464729 KIF3CO14782 793 aa12.86□□□□□ -0.35
NUP188-202ENST00000464729 HOXB3P14651 431 aaPredicted RBP12.86□□□□□ -0.35
NUP188-202ENST00000464729 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
NUP188-202ENST00000464729 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
NUP188-202ENST00000464729 POTEMA6NI47 508 aa12.83□□□□□ -0.36
NUP188-202ENST00000464729 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
NUP188-202ENST00000464729 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
NUP188-202ENST00000464729 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
NUP188-202ENST00000464729 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
NUP188-202ENST00000464729 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
NUP188-202ENST00000464729 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
NUP188-202ENST00000464729 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
NUP188-202ENST00000464729 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
NUP188-202ENST00000464729 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
NUP188-202ENST00000464729 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
NUP188-202ENST00000464729 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
NUP188-202ENST00000464729 FOXK1P85037 733 aa12.7□□□□□ -0.38
NUP188-202ENST00000464729 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
NUP188-202ENST00000464729 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
NUP188-202ENST00000464729 SLC34A2O95436 690 aa12.66□□□□□ -0.38
NUP188-202ENST00000464729 EMP3P54852 163 aa12.66□□□□□ -0.38
NUP188-202ENST00000464729 DSG2Q14126 1118 aa12.66□□□□□ -0.38
NUP188-202ENST00000464729 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
NUP188-202ENST00000464729 PLPP6Q8IY26 295 aa12.64□□□□□ -0.39
NUP188-202ENST00000464729 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
NUP188-202ENST00000464729 PDE4AP27815 886 aa12.62□□□□□ -0.39
NUP188-202ENST00000464729 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
NUP188-202ENST00000464729 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
NUP188-202ENST00000464729 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
NUP188-202ENST00000464729 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
NUP188-202ENST00000464729 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
NUP188-202ENST00000464729 PPP1R15BQ5SWA1 713 aa12.59□□□□□ -0.39
NUP188-202ENST00000464729 MFSD10Q14728 455 aa12.58□□□□□ -0.4
NUP188-202ENST00000464729 PCDHGA4Q9Y5G9 962 aa12.58□□□□□ -0.4
NUP188-202ENST00000464729 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
NUP188-202ENST00000464729 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
NUP188-202ENST00000464729 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
NUP188-202ENST00000464729 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.4
NUP188-202ENST00000464729 LARP6Q9BRS8 491 aaKnown RBP12.57□□□□□ -0.4
NUP188-202ENST00000464729 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
NUP188-202ENST00000464729 PTCD2Q8WV60 388 aaKnown RBP12.56□□□□□ -0.4
NUP188-202ENST00000464729 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
NUP188-202ENST00000464729 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
NUP188-202ENST00000464729 ERBB3P21860 1342 aa12.53□□□□□ -0.4
NUP188-202ENST00000464729 NUDT7P0C024 238 aa12.51□□□□□ -0.41
NUP188-202ENST00000464729 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
NUP188-202ENST00000464729 KDM4FA0A1W2PPD8 638 aa12.49□□□□□ -0.41
NUP188-202ENST00000464729 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
NUP188-202ENST00000464729 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
NUP188-202ENST00000464729 NACADO15069 1562 aa12.45□□□□□ -0.42
NUP188-202ENST00000464729 TBC1D12O60347 775 aa12.45□□□□□ -0.42
NUP188-202ENST00000464729 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
NUP188-202ENST00000464729 LHX6Q9UPM6 363 aa12.43□□□□□ -0.42
NUP188-202ENST00000464729 EMILIN3Q9NT22 766 aa12.42□□□□□ -0.42
NUP188-202ENST00000464729 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
NUP188-202ENST00000464729 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
NUP188-202ENST00000464729 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
NUP188-202ENST00000464729 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
NUP188-202ENST00000464729 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
NUP188-202ENST00000464729 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
NUP188-202ENST00000464729 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
NUP188-202ENST00000464729 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
NUP188-202ENST00000464729 EVI5O60447 810 aa12.32□□□□□ -0.44
NUP188-202ENST00000464729 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
NUP188-202ENST00000464729 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
NUP188-202ENST00000464729 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
NUP188-202ENST00000464729 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
NUP188-202ENST00000464729 DPYSL4O14531 572 aa12.27□□□□□ -0.45
NUP188-202ENST00000464729 PBX2P40425 430 aa12.27□□□□□ -0.45
NUP188-202ENST00000464729 E2F4Q16254 413 aa12.27□□□□□ -0.45
NUP188-202ENST00000464729 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
NUP188-202ENST00000464729 SPNS2Q8IVW8 549 aa12.26□□□□□ -0.45
NUP188-202ENST00000464729 FOSBP53539 338 aa12.25□□□□□ -0.45
NUP188-202ENST00000464729 ZNF454Q8N9F8 522 aa12.24□□□□□ -0.45
NUP188-202ENST00000464729 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
NUP188-202ENST00000464729 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
NUP188-202ENST00000464729 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
NUP188-202ENST00000464729 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
NUP188-202ENST00000464729 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.45
NUP188-202ENST00000464729 ARHGAP33O14559 1287 aa12.2□□□□□ -0.46
NUP188-202ENST00000464729 PDIA6Q15084 440 aa12.19□□□□□ -0.46
NUP188-202ENST00000464729 MYO15BQ96JP2 1530 aa12.18□□□□□ -0.46
NUP188-202ENST00000464729 UNC13AQ9UPW8 1703 aa12.18□□□□□ -0.46
NUP188-202ENST00000464729 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
NUP188-202ENST00000464729 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
NUP188-202ENST00000464729 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
NUP188-202ENST00000464729 PTGER2P43116 358 aa12.16□□□□□ -0.46
NUP188-202ENST00000464729 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
NUP188-202ENST00000464729 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
NUP188-202ENST00000464729 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
NUP188-202ENST00000464729 PHF14O94880 888 aa12.15□□□□□ -0.46
NUP188-202ENST00000464729 PSEN2P49810 448 aa12.15□□□□□ -0.46
NUP188-202ENST00000464729 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
NUP188-202ENST00000464729 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
NUP188-202ENST00000464729 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
NUP188-202ENST00000464729 KCNK17Q96T54 332 aa12.13□□□□□ -0.47
NUP188-202ENST00000464729 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
NUP188-202ENST00000464729 KCNV2Q8TDN2 545 aa12.12□□□□□ -0.47
NUP188-202ENST00000464729 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms