RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 ADAMTSL3P82987 1691 aa22.38■■□□□ 1.17
RPP40-203ENST00000464646 ARHGAP5Q13017 1502 aa22.37■■□□□ 1.17
RPP40-203ENST00000464646 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
RPP40-203ENST00000464646 PTPRMP28827 1452 aa22.37■■□□□ 1.17
RPP40-203ENST00000464646 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
RPP40-203ENST00000464646 PCF11O94913 1555 aaKnown RBP22.36■■□□□ 1.17
RPP40-203ENST00000464646 YEATS2Q9ULM3 1422 aa22.35■■□□□ 1.17
RPP40-203ENST00000464646 POGZQ7Z3K3 1410 aa22.34■■□□□ 1.17
RPP40-203ENST00000464646 RIMS1Q86UR5 1692 aaKnown RBP22.33■■□□□ 1.17
RPP40-203ENST00000464646 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
RPP40-203ENST00000464646 CCDC18Q5T9S5 1454 aa22.32■■□□□ 1.16
RPP40-203ENST00000464646 ZMYM4Q5VZL5 1548 aa22.31■■□□□ 1.16
RPP40-203ENST00000464646 MAGI2Q86UL8 1455 aa22.29■■□□□ 1.16
RPP40-203ENST00000464646 AFAP1Q8N556 730 aa22.27■■□□□ 1.16
RPP40-203ENST00000464646 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
RPP40-203ENST00000464646 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
RPP40-203ENST00000464646 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
RPP40-203ENST00000464646 CDC42BPBQ9Y5S2 1711 aa22.23■■□□□ 1.15
RPP40-203ENST00000464646 ATP10AO60312 1499 aa22.23■■□□□ 1.15
RPP40-203ENST00000464646 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
RPP40-203ENST00000464646 C9orf84Q5VXU9 1444 aa22.22■■□□□ 1.15
RPP40-203ENST00000464646 SIGLEC1Q9BZZ2 1709 aa22.21■■□□□ 1.15
RPP40-203ENST00000464646 FER1L4A9Z1Z3 1794 aa22.21■■□□□ 1.15
RPP40-203ENST00000464646 PREX2Q70Z35 1606 aa22.2■■□□□ 1.14
RPP40-203ENST00000464646 CDC42BPAQ5VT25 1732 aa22.16■■□□□ 1.14
RPP40-203ENST00000464646 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
RPP40-203ENST00000464646 HSPA2P54652 639 aa22.15■■□□□ 1.14
RPP40-203ENST00000464646 ESF1Q9H501 851 aaKnown RBP22.15■■□□□ 1.14
RPP40-203ENST00000464646 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.13
RPP40-203ENST00000464646 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
RPP40-203ENST00000464646 KDM5CP41229 1560 aa22.12■■□□□ 1.13
RPP40-203ENST00000464646 ABCC1P33527 1531 aa22.12■■□□□ 1.13
RPP40-203ENST00000464646 CEBPAP49715 358 aaPredicted RBP22.12■■□□□ 1.13
RPP40-203ENST00000464646 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
RPP40-203ENST00000464646 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
RPP40-203ENST00000464646 LMTK3Q96Q04 1460 aa22.1■■□□□ 1.13
RPP40-203ENST00000464646 HNRNPMP52272 730 aaKnown RBP eCLIP22.1■■□□□ 1.13
RPP40-203ENST00000464646 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
RPP40-203ENST00000464646 DIP2CQ9Y2E4 1556 aa22.09■■□□□ 1.13
RPP40-203ENST00000464646 CEP162Q5TB80 1403 aa22.08■■□□□ 1.13
RPP40-203ENST00000464646 ABCA6Q8N139 1617 aa22.08■■□□□ 1.13
RPP40-203ENST00000464646 MLH3Q9UHC1 1453 aa22.06■■□□□ 1.12
RPP40-203ENST00000464646 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
RPP40-203ENST00000464646 SPAG9O60271 1321 aaKnown RBP22.06■■□□□ 1.12
RPP40-203ENST00000464646 SYCP2Q9BX26 1530 aa22.05■■□□□ 1.12
RPP40-203ENST00000464646 SAMD9LQ8IVG5 1584 aa22.04■■□□□ 1.12
RPP40-203ENST00000464646 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
RPP40-203ENST00000464646 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.11
RPP40-203ENST00000464646 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
RPP40-203ENST00000464646 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
RPP40-203ENST00000464646 REREQ9P2R6 1566 aa21.97■■□□□ 1.11
RPP40-203ENST00000464646 PREX1Q8TCU6 1659 aa21.97■■□□□ 1.11
RPP40-203ENST00000464646 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
RPP40-203ENST00000464646 ZNF644Q9H582 1327 aaPredicted RBP21.95■■□□□ 1.1
RPP40-203ENST00000464646 UHRF1BP1Q6BDS2 1440 aa21.94■■□□□ 1.1
RPP40-203ENST00000464646 AGLP35573 1532 aa21.93■■□□□ 1.1
RPP40-203ENST00000464646 ATP7AQ04656 1500 aa21.93■■□□□ 1.1
RPP40-203ENST00000464646 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
RPP40-203ENST00000464646 TIAM1Q13009 1591 aa21.92■■□□□ 1.1
RPP40-203ENST00000464646 KIAA1107Q9UPP5 1409 aa21.92■■□□□ 1.1
RPP40-203ENST00000464646 GGT6Q6P531 493 aa21.92■■□□□ 1.1
RPP40-203ENST00000464646 SETD1BQ9UPS6 1966 aaKnown RBP21.92■■□□□ 1.1
RPP40-203ENST00000464646 C3P01024 1663 aa21.91■■□□□ 1.1
RPP40-203ENST00000464646 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
RPP40-203ENST00000464646 A2MP01023 1474 aa21.87■■□□□ 1.09
RPP40-203ENST00000464646 NCOA2Q15596 1464 aa21.86■■□□□ 1.09
RPP40-203ENST00000464646 INO80Q9ULG1 1556 aaPredicted RBP21.85■■□□□ 1.09
RPP40-203ENST00000464646 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
RPP40-203ENST00000464646 VPS8Q8N3P4 1428 aa21.82■■□□□ 1.08
RPP40-203ENST00000464646 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
RPP40-203ENST00000464646 CLTCQ00610 1675 aaKnown RBP21.82■■□□□ 1.08
RPP40-203ENST00000464646 ADGBQ8N7X0 1667 aa21.82■■□□□ 1.08
RPP40-203ENST00000464646 APLP2Q06481 763 aa21.8■■□□□ 1.08
RPP40-203ENST00000464646 CAMSAP2Q08AD1 1489 aa21.79■■□□□ 1.08
RPP40-203ENST00000464646 CERKQ8TCT0 537 aa21.79■■□□□ 1.08
RPP40-203ENST00000464646 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
RPP40-203ENST00000464646 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
RPP40-203ENST00000464646 MBD5Q9P267 1494 aa21.77■■□□□ 1.08
RPP40-203ENST00000464646 MROH2AA6NES4 1674 aa21.77■■□□□ 1.08
RPP40-203ENST00000464646 KIF3BO15066 747 aa21.77■■□□□ 1.08
RPP40-203ENST00000464646 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.07
RPP40-203ENST00000464646 RSPH4AQ5TD94 716 aa21.76■■□□□ 1.07
RPP40-203ENST00000464646 STRCQ7RTU9 1775 aa21.76■■□□□ 1.07
RPP40-203ENST00000464646 PLXNC1O60486 1568 aa21.75■■□□□ 1.07
RPP40-203ENST00000464646 LRRC9Q6ZRR7 1453 aa21.75■■□□□ 1.07
RPP40-203ENST00000464646 RTEL1-TNFRSF6BF6WH68 1400 aa21.74■■□□□ 1.07
RPP40-203ENST00000464646 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
RPP40-203ENST00000464646 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
RPP40-203ENST00000464646 NPATQ14207 1427 aa21.72■■□□□ 1.07
RPP40-203ENST00000464646 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
RPP40-203ENST00000464646 CAMSAP1Q5T5Y3 1602 aa21.68■■□□□ 1.06
RPP40-203ENST00000464646 NCKAP5LQ9HCH0 1330 aa21.67■■□□□ 1.06
RPP40-203ENST00000464646 WASHC2CQ9Y4E1 1318 aa21.67■■□□□ 1.06
RPP40-203ENST00000464646 PTPRTO14522 1441 aa21.64■■□□□ 1.06
RPP40-203ENST00000464646 PTPRKQ15262 1439 aa21.64■■□□□ 1.06
RPP40-203ENST00000464646 MYO3AQ8NEV4 1616 aa21.64■■□□□ 1.05
RPP40-203ENST00000464646 ARHGEF5Q12774 1597 aa21.64■■□□□ 1.05
RPP40-203ENST00000464646 NCOA1Q15788 1441 aa21.63■■□□□ 1.05
RPP40-203ENST00000464646 MYOM3Q5VTT5 1437 aa21.62■■□□□ 1.05
RPP40-203ENST00000464646 MAP3K1Q13233 1512 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms