RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
USP25-207ENST00000464435 MFRPQ9BY79 579 aa12.2□□□□□ -0.46
USP25-207ENST00000464435 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
USP25-207ENST00000464435 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
USP25-207ENST00000464435 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
USP25-207ENST00000464435 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
USP25-207ENST00000464435 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
USP25-207ENST00000464435 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
USP25-207ENST00000464435 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
USP25-207ENST00000464435 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
USP25-207ENST00000464435 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
USP25-207ENST00000464435 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
USP25-207ENST00000464435 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
USP25-207ENST00000464435 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
USP25-207ENST00000464435 DOK7Q18PE1 504 aa12□□□□□ -0.49
USP25-207ENST00000464435 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
USP25-207ENST00000464435 ERBB3P21860 1342 aa11.98□□□□□ -0.49
USP25-207ENST00000464435 PPP1R37O75864 691 aa11.97□□□□□ -0.49
USP25-207ENST00000464435 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
USP25-207ENST00000464435 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
USP25-207ENST00000464435 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
USP25-207ENST00000464435 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
USP25-207ENST00000464435 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
USP25-207ENST00000464435 KIF3CO14782 793 aa11.88□□□□□ -0.51
USP25-207ENST00000464435 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
USP25-207ENST00000464435 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
USP25-207ENST00000464435 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
USP25-207ENST00000464435 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
USP25-207ENST00000464435 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
USP25-207ENST00000464435 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
USP25-207ENST00000464435 ZNF687Q8N1G0 1237 aa11.82□□□□□ -0.52
USP25-207ENST00000464435 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
USP25-207ENST00000464435 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
USP25-207ENST00000464435 PDE4AP27815 886 aa11.78□□□□□ -0.52
USP25-207ENST00000464435 FOXK1P85037 733 aa11.78□□□□□ -0.52
USP25-207ENST00000464435 CRISPLD2Q9H0B8 497 aa11.77□□□□□ -0.53
USP25-207ENST00000464435 SLC34A2O95436 690 aa11.76□□□□□ -0.53
USP25-207ENST00000464435 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
USP25-207ENST00000464435 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
USP25-207ENST00000464435 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
USP25-207ENST00000464435 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
USP25-207ENST00000464435 PLPP6Q8IY26 295 aa11.7□□□□□ -0.54
USP25-207ENST00000464435 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
USP25-207ENST00000464435 DSG2Q14126 1118 aa11.69□□□□□ -0.54
USP25-207ENST00000464435 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
USP25-207ENST00000464435 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
USP25-207ENST00000464435 PTGER2P43116 358 aa11.67□□□□□ -0.54
USP25-207ENST00000464435 MFSD10Q14728 455 aa11.67□□□□□ -0.54
USP25-207ENST00000464435 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
USP25-207ENST00000464435 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
USP25-207ENST00000464435 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
USP25-207ENST00000464435 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
USP25-207ENST00000464435 TBC1D12O60347 775 aa11.63□□□□□ -0.55
USP25-207ENST00000464435 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
USP25-207ENST00000464435 LSM11P83369 360 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP25-207ENST00000464435 PCDHGA4Q9Y5G9 962 aa11.62□□□□□ -0.55
USP25-207ENST00000464435 NUDT7P0C024 238 aa11.59□□□□□ -0.55
USP25-207ENST00000464435 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
USP25-207ENST00000464435 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
USP25-207ENST00000464435 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
USP25-207ENST00000464435 LHX6Q9UPM6 363 aa11.54□□□□□ -0.56
USP25-207ENST00000464435 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
USP25-207ENST00000464435 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.57
USP25-207ENST00000464435 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
USP25-207ENST00000464435 PBX2P40425 430 aa11.52□□□□□ -0.57
USP25-207ENST00000464435 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
USP25-207ENST00000464435 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
USP25-207ENST00000464435 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP25-207ENST00000464435 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
USP25-207ENST00000464435 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
USP25-207ENST00000464435 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
USP25-207ENST00000464435 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
USP25-207ENST00000464435 E2F4Q16254 413 aa11.43□□□□□ -0.58
USP25-207ENST00000464435 EVI5O60447 810 aa11.41□□□□□ -0.58
USP25-207ENST00000464435 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
USP25-207ENST00000464435 ARIH1Q9Y4X5 557 aaPredicted RBP11.41□□□□□ -0.58
USP25-207ENST00000464435 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
USP25-207ENST00000464435 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
USP25-207ENST00000464435 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
USP25-207ENST00000464435 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
USP25-207ENST00000464435 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
USP25-207ENST00000464435 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
USP25-207ENST00000464435 DPYSL4O14531 572 aa11.34□□□□□ -0.59
USP25-207ENST00000464435 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
USP25-207ENST00000464435 PSEN2P49810 448 aa11.33□□□□□ -0.6
USP25-207ENST00000464435 FOSBP53539 338 aa11.33□□□□□ -0.6
USP25-207ENST00000464435 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
USP25-207ENST00000464435 PDIA6Q15084 440 aa11.32□□□□□ -0.6
USP25-207ENST00000464435 HRO43593 1189 aa11.31□□□□□ -0.6
USP25-207ENST00000464435 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
USP25-207ENST00000464435 TK2O00142 265 aa11.3□□□□□ -0.6
USP25-207ENST00000464435 PHF14O94880 888 aa11.29□□□□□ -0.6
USP25-207ENST00000464435 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
USP25-207ENST00000464435 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
USP25-207ENST00000464435 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
USP25-207ENST00000464435 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
USP25-207ENST00000464435 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
USP25-207ENST00000464435 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
USP25-207ENST00000464435 EPAS1Q99814 870 aa11.27□□□□□ -0.61
USP25-207ENST00000464435 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms