RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
HOXB3-203ENST00000464266 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
HOXB3-203ENST00000464266 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
HOXB3-203ENST00000464266 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
HOXB3-203ENST00000464266 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
HOXB3-203ENST00000464266 FAM117AQ9C073 453 aa9.06□□□□□ -0.96
HOXB3-203ENST00000464266 APBB1O00213 710 aa9.05□□□□□ -0.96
HOXB3-203ENST00000464266 FLIIQ13045 1269 aa9.05□□□□□ -0.96
HOXB3-203ENST00000464266 ARID3CA6NKF2 412 aa9.04□□□□□ -0.96
HOXB3-203ENST00000464266 PAK3O75914 559 aaPredicted RBP9.04□□□□□ -0.96
HOXB3-203ENST00000464266 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
HOXB3-203ENST00000464266 MS4A4AQ96JQ5 239 aa9.04□□□□□ -0.96
HOXB3-203ENST00000464266 MAP3K13O43283 966 aa9.03□□□□□ -0.96
HOXB3-203ENST00000464266 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
HOXB3-203ENST00000464266 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
HOXB3-203ENST00000464266 ZBTB7CA1YPR0 619 aa9□□□□□ -0.97
HOXB3-203ENST00000464266 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
HOXB3-203ENST00000464266 GOLGA2Q08379 1002 aa9□□□□□ -0.97
HOXB3-203ENST00000464266 POTEDQ86YR6 584 aa9□□□□□ -0.97
HOXB3-203ENST00000464266 KIF12Q96FN5 646 aa9□□□□□ -0.97
HOXB3-203ENST00000464266 PLEKHG3A1L390 1219 aa8.99□□□□□ -0.97
HOXB3-203ENST00000464266 DPYSL4O14531 572 aa8.99□□□□□ -0.97
HOXB3-203ENST00000464266 MINK1Q8N4C8 1332 aaPredicted RBP8.99□□□□□ -0.97
HOXB3-203ENST00000464266 RB1CC1Q8TDY2 1594 aa8.99□□□□□ -0.97
HOXB3-203ENST00000464266 PDIA6Q15084 440 aa8.97□□□□□ -0.97
HOXB3-203ENST00000464266 GPR37O15354 613 aa8.96□□□□□ -0.98
HOXB3-203ENST00000464266 GPHNQ9NQX3 736 aaPredicted RBP8.96□□□□□ -0.98
HOXB3-203ENST00000464266 MAP2K5Q13163 448 aa8.95□□□□□ -0.98
HOXB3-203ENST00000464266 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
HOXB3-203ENST00000464266 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
HOXB3-203ENST00000464266 PRKAR2AP13861 404 aaKnown RBP8.93□□□□□ -0.98
HOXB3-203ENST00000464266 AMHR2Q16671 573 aa8.93□□□□□ -0.98
HOXB3-203ENST00000464266 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
HOXB3-203ENST00000464266 EMILIN3Q9NT22 766 aa8.93□□□□□ -0.98
HOXB3-203ENST00000464266 NUTM2FA1L443 756 aa8.92□□□□□ -0.98
HOXB3-203ENST00000464266 A6NJR5 290 aa8.92□□□□□ -0.98
HOXB3-203ENST00000464266 IRF6O14896 467 aa8.92□□□□□ -0.98
HOXB3-203ENST00000464266 GOPCQ9HD26 462 aa8.92□□□□□ -0.98
HOXB3-203ENST00000464266 CCDC82Q8N4S0 544 aa8.91□□□□□ -0.98
HOXB3-203ENST00000464266 TRAK2O60296 914 aa8.9□□□□□ -0.98
HOXB3-203ENST00000464266 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
HOXB3-203ENST00000464266 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
HOXB3-203ENST00000464266 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
HOXB3-203ENST00000464266 CLUAP1Q96AJ1 413 aa8.88□□□□□ -0.99
HOXB3-203ENST00000464266 PCMTD1Q96MG8 357 aaPredicted RBP8.88□□□□□ -0.99
HOXB3-203ENST00000464266 GNPATO15228 680 aa8.87□□□□□ -0.99
HOXB3-203ENST00000464266 DSG2Q14126 1118 aa8.87□□□□□ -0.99
HOXB3-203ENST00000464266 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
HOXB3-203ENST00000464266 HIC1Q14526 733 aa8.85□□□□□ -0.99
HOXB3-203ENST00000464266 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
HOXB3-203ENST00000464266 FCHSD2O94868 740 aa8.83□□□□□ -1
HOXB3-203ENST00000464266 TMC2Q8TDI7 906 aa8.83□□□□□ -1
HOXB3-203ENST00000464266 UNC13AQ9UPW8 1703 aa8.81□□□□□ -1
HOXB3-203ENST00000464266 FOXK1P85037 733 aa8.81□□□□□ -1
HOXB3-203ENST00000464266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.81□□□□□ -1
HOXB3-203ENST00000464266 ZRANB1Q9UGI0 708 aa8.81□□□□□ -1
HOXB3-203ENST00000464266 FECHP22830 423 aa8.8□□□□□ -1
HOXB3-203ENST00000464266 MAP3K9P80192 1104 aa8.8□□□□□ -1
HOXB3-203ENST00000464266 MCM6Q14566 821 aa8.8□□□□□ -1
HOXB3-203ENST00000464266 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
HOXB3-203ENST00000464266 PHF12Q96QT6 1004 aa8.79□□□□□ -1
HOXB3-203ENST00000464266 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
HOXB3-203ENST00000464266 CECR2Q9BXF3 1484 aa8.78□□□□□ -1
HOXB3-203ENST00000464266 MS4A1P11836 297 aa8.78□□□□□ -1
HOXB3-203ENST00000464266 OSBPP22059 807 aa8.78□□□□□ -1
HOXB3-203ENST00000464266 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
HOXB3-203ENST00000464266 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
HOXB3-203ENST00000464266 PLPP6Q8IY26 295 aa8.78□□□□□ -1
HOXB3-203ENST00000464266 CCDC97Q96F63 343 aaPredicted RBP8.78□□□□□ -1
HOXB3-203ENST00000464266 NACADO15069 1562 aa8.78□□□□□ -1
HOXB3-203ENST00000464266 RAD21O60216 631 aa8.77□□□□□ -1.01
HOXB3-203ENST00000464266 SH3D19Q5HYK7 790 aa8.77□□□□□ -1.01
HOXB3-203ENST00000464266 KCTD17Q8N5Z5 321 aa8.77□□□□□ -1.01
HOXB3-203ENST00000464266 TRAIPQ9BWF2 469 aa8.77□□□□□ -1.01
HOXB3-203ENST00000464266 SERPINA10Q9UK55 444 aa8.77□□□□□ -1.01
HOXB3-203ENST00000464266 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
HOXB3-203ENST00000464266 ILDR1Q86SU0 546 aaPredicted RBP8.76□□□□□ -1.01
HOXB3-203ENST00000464266 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
HOXB3-203ENST00000464266 MICALL2Q8IY33 904 aa8.74□□□□□ -1.01
HOXB3-203ENST00000464266 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
HOXB3-203ENST00000464266 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
HOXB3-203ENST00000464266 DDX12PQ92771 950 aa8.73□□□□□ -1.01
HOXB3-203ENST00000464266 CD44P16070 742 aaKnown RBP8.72□□□□□ -1.01
HOXB3-203ENST00000464266 PTGER2P43116 358 aa8.72□□□□□ -1.01
HOXB3-203ENST00000464266 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
HOXB3-203ENST00000464266 CLCN1P35523 988 aa8.71□□□□□ -1.02
HOXB3-203ENST00000464266 PTGDRQ13258 359 aa8.71□□□□□ -1.02
HOXB3-203ENST00000464266 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
HOXB3-203ENST00000464266 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.02
HOXB3-203ENST00000464266 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
HOXB3-203ENST00000464266 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
HOXB3-203ENST00000464266 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
HOXB3-203ENST00000464266 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
HOXB3-203ENST00000464266 MS4A3Q96HJ5 214 aa8.7□□□□□ -1.02
HOXB3-203ENST00000464266 C2orf72A6NCS6 295 aa8.69□□□□□ -1.02
HOXB3-203ENST00000464266 TIE1P35590 1138 aa8.69□□□□□ -1.02
HOXB3-203ENST00000464266 OXER1Q8TDS5 423 aa8.69□□□□□ -1.02
HOXB3-203ENST00000464266 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
HOXB3-203ENST00000464266 TBC1D12O60347 775 aa8.67□□□□□ -1.02
HOXB3-203ENST00000464266 GPCPD1Q9NPB8 672 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms