RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 FYCO1Q9BQS8 1478 aa32.35■■■□□ 2.77
SHISA4-202ENST00000464117 ARID4BQ4LE39 1312 aaPredicted RBP32.34■■■□□ 2.77
SHISA4-202ENST00000464117 POGZQ7Z3K3 1410 aa32.34■■■□□ 2.77
SHISA4-202ENST00000464117 BCORL1Q5H9F3 1711 aa32.31■■■□□ 2.76
SHISA4-202ENST00000464117 ZFYVE16Q7Z3T8 1539 aa32.31■■■□□ 2.76
SHISA4-202ENST00000464117 HECW2Q9P2P5 1572 aa32.28■■■□□ 2.76
SHISA4-202ENST00000464117 ARHGAP5Q13017 1502 aa32.28■■■□□ 2.76
SHISA4-202ENST00000464117 YEATS2Q9ULM3 1422 aa32.26■■■□□ 2.76
SHISA4-202ENST00000464117 PTPRMP28827 1452 aa32.26■■■□□ 2.75
SHISA4-202ENST00000464117 ZNF518AQ6AHZ1 1483 aa32.21■■■□□ 2.75
SHISA4-202ENST00000464117 MADDQ8WXG6 1647 aa32.2■■■□□ 2.75
SHISA4-202ENST00000464117 CDC42BPBQ9Y5S2 1711 aa32.19■■■□□ 2.74
SHISA4-202ENST00000464117 PREX2Q70Z35 1606 aa32.18■■■□□ 2.74
SHISA4-202ENST00000464117 ATP10AO60312 1499 aa32.14■■■□□ 2.74
SHISA4-202ENST00000464117 KDM5CP41229 1560 aa32.14■■■□□ 2.74
SHISA4-202ENST00000464117 SIGLEC1Q9BZZ2 1709 aa32.12■■■□□ 2.73
SHISA4-202ENST00000464117 C9orf84Q5VXU9 1444 aa32.11■■■□□ 2.73
SHISA4-202ENST00000464117 AFAP1Q8N556 730 aa32.11■■■□□ 2.73
SHISA4-202ENST00000464117 CDC42BPAQ5VT25 1732 aa32.09■■■□□ 2.73
SHISA4-202ENST00000464117 RIMS1Q86UR5 1692 aaKnown RBP32.08■■■□□ 2.73
SHISA4-202ENST00000464117 ABCC1P33527 1531 aa32.08■■■□□ 2.73
SHISA4-202ENST00000464117 CEP162Q5TB80 1403 aa32.08■■■□□ 2.73
SHISA4-202ENST00000464117 MLH3Q9UHC1 1453 aa32.03■■■□□ 2.72
SHISA4-202ENST00000464117 ARHGEF12Q9NZN5 1544 aa32.03■■■□□ 2.72
SHISA4-202ENST00000464117 ITSN2Q9NZM3 1697 aa32.02■■■□□ 2.72
SHISA4-202ENST00000464117 TRAPPC8Q9Y2L5 1435 aa32.01■■■□□ 2.72
SHISA4-202ENST00000464117 GPATCH8Q9UKJ3 1502 aaKnown RBP32.01■■■□□ 2.72
SHISA4-202ENST00000464117 MLECQ14165 292 aa32.01■■■□□ 2.71
SHISA4-202ENST00000464117 MYT1LQ9UL68 1186 aa32.01■■■□□ 2.71
SHISA4-202ENST00000464117 MTUS2Q5JR59 1369 aa32■■■□□ 2.71
SHISA4-202ENST00000464117 DIP2CQ9Y2E4 1556 aa31.98■■■□□ 2.71
SHISA4-202ENST00000464117 FER1L4A9Z1Z3 1794 aa31.97■■■□□ 2.71
SHISA4-202ENST00000464117 REREQ9P2R6 1566 aa31.97■■■□□ 2.71
SHISA4-202ENST00000464117 CCNB3Q8WWL7 1395 aa31.94■■■□□ 2.7
SHISA4-202ENST00000464117 ZNF777Q9ULD5 760 aaPredicted RBP31.94■■■□□ 2.7
SHISA4-202ENST00000464117 SAMD9LQ8IVG5 1584 aa31.94■■■□□ 2.7
SHISA4-202ENST00000464117 ABCA6Q8N139 1617 aa31.93■■■□□ 2.7
SHISA4-202ENST00000464117 LMTK3Q96Q04 1460 aa31.91■■■□□ 2.7
SHISA4-202ENST00000464117 EHBP1L1Q8N3D4 1523 aa31.91■■■□□ 2.7
SHISA4-202ENST00000464117 CFDP1Q9UEE9 299 aaPredicted RBP31.91■■■□□ 2.7
SHISA4-202ENST00000464117 PLEKHH2Q8IVE3 1493 aa31.9■■■□□ 2.7
SHISA4-202ENST00000464117 KIAA1107Q9UPP5 1409 aa31.89■■■□□ 2.7
SHISA4-202ENST00000464117 SYCP2Q9BX26 1530 aa31.89■■■□□ 2.7
SHISA4-202ENST00000464117 KIDINS220Q9ULH0 1771 aa31.87■■■□□ 2.69
SHISA4-202ENST00000464117 AGLP35573 1532 aa31.86■■■□□ 2.69
SHISA4-202ENST00000464117 PLPPR3Q6T4P5 718 aa31.86■■■□□ 2.69
SHISA4-202ENST00000464117 HNRNPMP52272 730 aaKnown RBP eCLIP31.83■■■□□ 2.69
SHISA4-202ENST00000464117 LOC105371045A0A1W2PR82 267 aa31.82■■■□□ 2.68
SHISA4-202ENST00000464117 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
SHISA4-202ENST00000464117 SPAG9O60271 1321 aaKnown RBP31.81■■■□□ 2.68
SHISA4-202ENST00000464117 VPS8Q8N3P4 1428 aa31.75■■■□□ 2.67
SHISA4-202ENST00000464117 ATP7AQ04656 1500 aa31.74■■■□□ 2.67
SHISA4-202ENST00000464117 ILDR1Q86SU0 546 aaPredicted RBP31.73■■■□□ 2.67
SHISA4-202ENST00000464117 CEBPAP49715 358 aaPredicted RBP31.72■■■□□ 2.67
SHISA4-202ENST00000464117 INO80Q9ULG1 1556 aaPredicted RBP31.72■■■□□ 2.67
SHISA4-202ENST00000464117 ESF1Q9H501 851 aaKnown RBP31.71■■■□□ 2.67
SHISA4-202ENST00000464117 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
SHISA4-202ENST00000464117 HSPA2P54652 639 aa31.7■■■□□ 2.67
SHISA4-202ENST00000464117 NCOA2Q15596 1464 aa31.7■■■□□ 2.66
SHISA4-202ENST00000464117 ZNF644Q9H582 1327 aaPredicted RBP31.69■■■□□ 2.66
SHISA4-202ENST00000464117 PREX1Q8TCU6 1659 aa31.68■■■□□ 2.66
SHISA4-202ENST00000464117 MBD5Q9P267 1494 aa31.67■■■□□ 2.66
SHISA4-202ENST00000464117 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
SHISA4-202ENST00000464117 SETD1BQ9UPS6 1966 aaKnown RBP31.65■■■□□ 2.66
SHISA4-202ENST00000464117 A2MP01023 1474 aa31.64■■■□□ 2.66
SHISA4-202ENST00000464117 PLXNC1O60486 1568 aa31.64■■■□□ 2.65
SHISA4-202ENST00000464117 C3P01024 1663 aa31.62■■■□□ 2.65
SHISA4-202ENST00000464117 LRRC9Q6ZRR7 1453 aa31.61■■■□□ 2.65
SHISA4-202ENST00000464117 RTEL1-TNFRSF6BF6WH68 1400 aa31.6■■■□□ 2.65
SHISA4-202ENST00000464117 MAP3K1Q13233 1512 aa31.59■■■□□ 2.65
SHISA4-202ENST00000464117 UHRF1BP1Q6BDS2 1440 aa31.59■■■□□ 2.65
SHISA4-202ENST00000464117 ADGBQ8N7X0 1667 aa31.57■■■□□ 2.65
SHISA4-202ENST00000464117 RSPH4AQ5TD94 716 aa31.57■■■□□ 2.64
SHISA4-202ENST00000464117 CAMSAP2Q08AD1 1489 aa31.57■■■□□ 2.64
SHISA4-202ENST00000464117 CCDC141Q6ZP82 1450 aa31.55■■■□□ 2.64
SHISA4-202ENST00000464117 MROH2AA6NES4 1674 aa31.54■■■□□ 2.64
SHISA4-202ENST00000464117 ZMYM3Q14202 1370 aa31.49■■■□□ 2.63
SHISA4-202ENST00000464117 PPP6R1Q9UPN7 881 aa31.49■■■□□ 2.63
SHISA4-202ENST00000464117 DHX29Q7Z478 1369 aaKnown RBP31.48■■■□□ 2.63
SHISA4-202ENST00000464117 NPATQ14207 1427 aa31.48■■■□□ 2.63
SHISA4-202ENST00000464117 KANK4Q5T7N3 995 aaPredicted RBP31.47■■■□□ 2.63
SHISA4-202ENST00000464117 GGT6Q6P531 493 aa31.47■■■□□ 2.63
SHISA4-202ENST00000464117 ARHGEF5Q12774 1597 aa31.47■■■□□ 2.63
SHISA4-202ENST00000464117 FBXO41Q8TF61 875 aa31.44■■■□□ 2.62
SHISA4-202ENST00000464117 CLTCQ00610 1675 aaKnown RBP31.44■■■□□ 2.62
SHISA4-202ENST00000464117 DMRT2Q9Y5R5 561 aa31.42■■■□□ 2.62
SHISA4-202ENST00000464117 TSPY4P0CV99 314 aa31.41■■■□□ 2.62
SHISA4-202ENST00000464117 TSPY10P0CW01 314 aa31.41■■■□□ 2.62
SHISA4-202ENST00000464117 MIA2Q96PC5 1412 aa31.4■■■□□ 2.62
SHISA4-202ENST00000464117 STRCQ7RTU9 1775 aa31.39■■■□□ 2.62
SHISA4-202ENST00000464117 MYOM3Q5VTT5 1437 aa31.39■■■□□ 2.62
SHISA4-202ENST00000464117 APLP2Q06481 763 aa31.37■■■□□ 2.61
SHISA4-202ENST00000464117 KIF3BO15066 747 aa31.34■■■□□ 2.61
SHISA4-202ENST00000464117 PTPRKQ15262 1439 aa31.33■■■□□ 2.61
SHISA4-202ENST00000464117 FAM135AQ9P2D6 1515 aa31.32■■■□□ 2.6
SHISA4-202ENST00000464117 MAST1Q9Y2H9 1570 aa31.31■■■□□ 2.6
SHISA4-202ENST00000464117 PTPRTO14522 1441 aa31.29■■■□□ 2.6
SHISA4-202ENST00000464117 NCOA1Q15788 1441 aa31.27■■■□□ 2.6
SHISA4-202ENST00000464117 CERKQ8TCT0 537 aa31.26■■■□□ 2.59
SHISA4-202ENST00000464117 KDM5DQ9BY66 1539 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms