RNA–Protein interactions for RNA: ENST00000463963.1

HS6ST1-202, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

TSL 2

Gene HS6ST1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-202ENST00000463963 CLIP1P30622 1438 aa23.81■■□□□ 1.4
HS6ST1-202ENST00000463963 TROQ12816 1431 aaPredicted RBP23.8■■□□□ 1.4
HS6ST1-202ENST00000463963 MAGI2Q86UL8 1455 aa23.8■■□□□ 1.4
HS6ST1-202ENST00000463963 POGZQ7Z3K3 1410 aa23.79■■□□□ 1.4
HS6ST1-202ENST00000463963 YEATS2Q9ULM3 1422 aa23.78■■□□□ 1.4
HS6ST1-202ENST00000463963 EFCAB2Q5VUJ9 269 aa23.78■■□□□ 1.4
HS6ST1-202ENST00000463963 RIMS1Q86UR5 1692 aaKnown RBP23.78■■□□□ 1.4
HS6ST1-202ENST00000463963 ILDR1Q86SU0 546 aaPredicted RBP23.76■■□□□ 1.39
HS6ST1-202ENST00000463963 PCF11O94913 1555 aaKnown RBP23.76■■□□□ 1.39
HS6ST1-202ENST00000463963 ARHGAP5Q13017 1502 aa23.75■■□□□ 1.39
HS6ST1-202ENST00000463963 CASKIN1Q8WXD9 1431 aa23.72■■□□□ 1.39
HS6ST1-202ENST00000463963 CCDC18Q5T9S5 1454 aa23.72■■□□□ 1.39
HS6ST1-202ENST00000463963 MLECQ14165 292 aa23.69■■□□□ 1.38
HS6ST1-202ENST00000463963 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
HS6ST1-202ENST00000463963 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
HS6ST1-202ENST00000463963 ATP10AO60312 1499 aa23.67■■□□□ 1.38
HS6ST1-202ENST00000463963 FER1L4A9Z1Z3 1794 aa23.66■■□□□ 1.38
HS6ST1-202ENST00000463963 CDC42BPBQ9Y5S2 1711 aa23.66■■□□□ 1.38
HS6ST1-202ENST00000463963 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
HS6ST1-202ENST00000463963 FYCO1Q9BQS8 1478 aa23.65■■□□□ 1.38
HS6ST1-202ENST00000463963 MYT1LQ9UL68 1186 aa23.65■■□□□ 1.38
HS6ST1-202ENST00000463963 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
HS6ST1-202ENST00000463963 PREX2Q70Z35 1606 aa23.64■■□□□ 1.38
HS6ST1-202ENST00000463963 KDM5CP41229 1560 aa23.62■■□□□ 1.37
HS6ST1-202ENST00000463963 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
HS6ST1-202ENST00000463963 ABCC1P33527 1531 aa23.58■■□□□ 1.36
HS6ST1-202ENST00000463963 ARHGEF12Q9NZN5 1544 aa23.58■■□□□ 1.36
HS6ST1-202ENST00000463963 CDC42BPAQ5VT25 1732 aa23.57■■□□□ 1.36
HS6ST1-202ENST00000463963 ITSN2Q9NZM3 1697 aa23.56■■□□□ 1.36
HS6ST1-202ENST00000463963 DIP2CQ9Y2E4 1556 aa23.55■■□□□ 1.36
HS6ST1-202ENST00000463963 ABCA6Q8N139 1617 aa23.53■■□□□ 1.36
HS6ST1-202ENST00000463963 TRAPPC8Q9Y2L5 1435 aa23.52■■□□□ 1.36
HS6ST1-202ENST00000463963 MLH3Q9UHC1 1453 aa23.52■■□□□ 1.36
HS6ST1-202ENST00000463963 HSPA2P54652 639 aa23.52■■□□□ 1.36
HS6ST1-202ENST00000463963 REREQ9P2R6 1566 aa23.51■■□□□ 1.35
HS6ST1-202ENST00000463963 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
HS6ST1-202ENST00000463963 PREX1Q8TCU6 1659 aa23.45■■□□□ 1.34
HS6ST1-202ENST00000463963 SAMD9LQ8IVG5 1584 aa23.45■■□□□ 1.34
HS6ST1-202ENST00000463963 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
HS6ST1-202ENST00000463963 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
HS6ST1-202ENST00000463963 GPATCH8Q9UKJ3 1502 aaKnown RBP23.44■■□□□ 1.34
HS6ST1-202ENST00000463963 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
HS6ST1-202ENST00000463963 MTUS2Q5JR59 1369 aa23.43■■□□□ 1.34
HS6ST1-202ENST00000463963 FBXO41Q8TF61 875 aa23.43■■□□□ 1.34
HS6ST1-202ENST00000463963 AGLP35573 1532 aa23.43■■□□□ 1.34
HS6ST1-202ENST00000463963 CCNB3Q8WWL7 1395 aa23.41■■□□□ 1.34
HS6ST1-202ENST00000463963 ESF1Q9H501 851 aaKnown RBP23.41■■□□□ 1.34
HS6ST1-202ENST00000463963 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.33
HS6ST1-202ENST00000463963 HNRNPMP52272 730 aaKnown RBP eCLIP23.38■■□□□ 1.335e-7■□□□□ 8
HS6ST1-202ENST00000463963 PLEKHH2Q8IVE3 1493 aa23.37■■□□□ 1.33
HS6ST1-202ENST00000463963 SPAG9O60271 1321 aaKnown RBP23.37■■□□□ 1.33
HS6ST1-202ENST00000463963 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
HS6ST1-202ENST00000463963 C3P01024 1663 aa23.37■■□□□ 1.33
HS6ST1-202ENST00000463963 UHRF1BP1Q6BDS2 1440 aa23.36■■□□□ 1.33
HS6ST1-202ENST00000463963 EHBP1L1Q8N3D4 1523 aa23.35■■□□□ 1.33
HS6ST1-202ENST00000463963 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
HS6ST1-202ENST00000463963 SETD1BQ9UPS6 1966 aaKnown RBP23.33■■□□□ 1.33
HS6ST1-202ENST00000463963 ATP7AQ04656 1500 aa23.33■■□□□ 1.32
HS6ST1-202ENST00000463963 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
HS6ST1-202ENST00000463963 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
HS6ST1-202ENST00000463963 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
HS6ST1-202ENST00000463963 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
HS6ST1-202ENST00000463963 STRCQ7RTU9 1775 aa23.28■■□□□ 1.32
HS6ST1-202ENST00000463963 A2MP01023 1474 aa23.26■■□□□ 1.31
HS6ST1-202ENST00000463963 MROH2AA6NES4 1674 aa23.25■■□□□ 1.31
HS6ST1-202ENST00000463963 PLXNC1O60486 1568 aa23.24■■□□□ 1.31
HS6ST1-202ENST00000463963 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
HS6ST1-202ENST00000463963 ZNF644Q9H582 1327 aaPredicted RBP23.24■■□□□ 1.31
HS6ST1-202ENST00000463963 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
HS6ST1-202ENST00000463963 CERKQ8TCT0 537 aa23.22■■□□□ 1.31
HS6ST1-202ENST00000463963 CLTCQ00610 1675 aaKnown RBP23.21■■□□□ 1.31
HS6ST1-202ENST00000463963 NCOA2Q15596 1464 aa23.18■■□□□ 1.3
HS6ST1-202ENST00000463963 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
HS6ST1-202ENST00000463963 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
HS6ST1-202ENST00000463963 GGT6Q6P531 493 aa23.18■■□□□ 1.3
HS6ST1-202ENST00000463963 NPATQ14207 1427 aa23.17■■□□□ 1.3
HS6ST1-202ENST00000463963 RTEL1-TNFRSF6BF6WH68 1400 aa23.15■■□□□ 1.3
HS6ST1-202ENST00000463963 CAMSAP2Q08AD1 1489 aa23.14■■□□□ 1.29
HS6ST1-202ENST00000463963 CCDC141Q6ZP82 1450 aa23.13■■□□□ 1.29
HS6ST1-202ENST00000463963 VPS8Q8N3P4 1428 aa23.13■■□□□ 1.29
HS6ST1-202ENST00000463963 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
HS6ST1-202ENST00000463963 PTPRTO14522 1441 aa23.12■■□□□ 1.29
HS6ST1-202ENST00000463963 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
HS6ST1-202ENST00000463963 CAMSAP1Q5T5Y3 1602 aa23.09■■□□□ 1.29
HS6ST1-202ENST00000463963 MYO3AQ8NEV4 1616 aa23.09■■□□□ 1.29
HS6ST1-202ENST00000463963 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
HS6ST1-202ENST00000463963 DHX29Q7Z478 1369 aaKnown RBP23.08■■□□□ 1.29
HS6ST1-202ENST00000463963 LRRC9Q6ZRR7 1453 aa23.07■■□□□ 1.28
HS6ST1-202ENST00000463963 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
HS6ST1-202ENST00000463963 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
HS6ST1-202ENST00000463963 ZNF142P52746 1687 aaPredicted RBP23.06■■□□□ 1.28
HS6ST1-202ENST00000463963 KIF3BO15066 747 aa23.04■■□□□ 1.28
HS6ST1-202ENST00000463963 ARHGEF5Q12774 1597 aa23.04■■□□□ 1.28
HS6ST1-202ENST00000463963 CEP170BQ9Y4F5 1589 aaPredicted RBP23.04■■□□□ 1.28
HS6ST1-202ENST00000463963 TSPY4P0CV99 314 aa23.02■■□□□ 1.28
HS6ST1-202ENST00000463963 TSPY10P0CW01 314 aa23.02■■□□□ 1.28
HS6ST1-202ENST00000463963 LTBP4Q8N2S1 1624 aa23.01■■□□□ 1.27
HS6ST1-202ENST00000463963 NCKAP5LQ9HCH0 1330 aa23■■□□□ 1.27
HS6ST1-202ENST00000463963 KDM5DQ9BY66 1539 aa22.99■■□□□ 1.27
HS6ST1-202ENST00000463963 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms