RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 AKNAQ7Z591 1439 aa29.63■■■□□ 2.33
LMNB1-204ENST00000463908 NCOA2Q15596 1464 aa29.63■■■□□ 2.33
LMNB1-204ENST00000463908 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
LMNB1-204ENST00000463908 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
LMNB1-204ENST00000463908 ARHGAP5Q13017 1502 aa29.59■■■□□ 2.33
LMNB1-204ENST00000463908 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
LMNB1-204ENST00000463908 SUPT6HQ7KZ85 1726 aaKnown RBP29.58■■■□□ 2.33
LMNB1-204ENST00000463908 PREX2Q70Z35 1606 aa29.56■■■□□ 2.32
LMNB1-204ENST00000463908 RAPGEF3O95398 923 aa29.56■■■□□ 2.32
LMNB1-204ENST00000463908 CFDP1Q9UEE9 299 aaPredicted RBP29.56■■■□□ 2.32
LMNB1-204ENST00000463908 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
LMNB1-204ENST00000463908 ZNF777Q9ULD5 760 aaPredicted RBP29.52■■■□□ 2.32
LMNB1-204ENST00000463908 SCAPERQ9BY12 1400 aa29.52■■■□□ 2.32
LMNB1-204ENST00000463908 ADGRL1O94910 1474 aa29.5■■■□□ 2.31
LMNB1-204ENST00000463908 PPARGC1BQ86YN6 1023 aaKnown RBP29.5■■■□□ 2.31
LMNB1-204ENST00000463908 ZNF644Q9H582 1327 aaPredicted RBP29.48■■■□□ 2.31
LMNB1-204ENST00000463908 DENND4BO75064 1496 aaPredicted RBP29.48■■■□□ 2.31
LMNB1-204ENST00000463908 ARHGEF12Q9NZN5 1544 aa29.45■■■□□ 2.31
LMNB1-204ENST00000463908 SAMD9LQ8IVG5 1584 aa29.43■■■□□ 2.3
LMNB1-204ENST00000463908 HNRNPMP52272 730 aaKnown RBP eCLIP29.42■■■□□ 2.3
LMNB1-204ENST00000463908 AFAP1Q8N556 730 aa29.42■■■□□ 2.3
LMNB1-204ENST00000463908 FRMPD1Q5SYB0 1578 aa29.42■■■□□ 2.3
LMNB1-204ENST00000463908 MYOM3Q5VTT5 1437 aa29.41■■■□□ 2.3
LMNB1-204ENST00000463908 ITSN2Q9NZM3 1697 aa29.4■■■□□ 2.3
LMNB1-204ENST00000463908 ABCC1P33527 1531 aa29.4■■■□□ 2.3
LMNB1-204ENST00000463908 POGZQ7Z3K3 1410 aa29.39■■■□□ 2.3
LMNB1-204ENST00000463908 TRAPPC8Q9Y2L5 1435 aa29.38■■■□□ 2.29
LMNB1-204ENST00000463908 KIAA1107Q9UPP5 1409 aa29.37■■■□□ 2.29
LMNB1-204ENST00000463908 RICTORQ6R327 1708 aa29.37■■■□□ 2.29
LMNB1-204ENST00000463908 MIA2Q96PC5 1412 aa29.36■■■□□ 2.29
LMNB1-204ENST00000463908 PLEKHH2Q8IVE3 1493 aa29.34■■■□□ 2.29
LMNB1-204ENST00000463908 SYCP2Q9BX26 1530 aa29.32■■■□□ 2.28
LMNB1-204ENST00000463908 MBD5Q9P267 1494 aa29.32■■■□□ 2.28
LMNB1-204ENST00000463908 CAMSAP2Q08AD1 1489 aa29.3■■■□□ 2.28
LMNB1-204ENST00000463908 ZNF518AQ6AHZ1 1483 aa29.3■■■□□ 2.28
LMNB1-204ENST00000463908 ZMYM4Q5VZL5 1548 aa29.28■■■□□ 2.28
LMNB1-204ENST00000463908 FGD6Q6ZV73 1430 aa29.28■■■□□ 2.28
LMNB1-204ENST00000463908 KDM5CP41229 1560 aa29.26■■■□□ 2.27
LMNB1-204ENST00000463908 YEATS2Q9ULM3 1422 aa29.24■■■□□ 2.27
LMNB1-204ENST00000463908 MAGI2Q86UL8 1455 aa29.23■■■□□ 2.27
LMNB1-204ENST00000463908 HECW2Q9P2P5 1572 aa29.23■■■□□ 2.27
LMNB1-204ENST00000463908 RSPH4AQ5TD94 716 aa29.22■■■□□ 2.27
LMNB1-204ENST00000463908 MLH3Q9UHC1 1453 aa29.22■■■□□ 2.27
LMNB1-204ENST00000463908 PTPN23Q9H3S7 1636 aa29.2■■■□□ 2.27
LMNB1-204ENST00000463908 SPAG9O60271 1321 aaKnown RBP29.2■■■□□ 2.26
LMNB1-204ENST00000463908 TCOF1Q13428 1488 aaKnown RBP29.19■■■□□ 2.26
LMNB1-204ENST00000463908 ILDR1Q86SU0 546 aaPredicted RBP29.19■■■□□ 2.26
LMNB1-204ENST00000463908 MYT1LQ9UL68 1186 aa29.18■■■□□ 2.26
LMNB1-204ENST00000463908 ZFYVE16Q7Z3T8 1539 aa29.17■■■□□ 2.26
LMNB1-204ENST00000463908 ARHGEF5Q12774 1597 aa29.15■■■□□ 2.26
LMNB1-204ENST00000463908 CCDC141Q6ZP82 1450 aa29.15■■■□□ 2.26
LMNB1-204ENST00000463908 FAM50AQ14320 339 aaKnown RBP29.13■■■□□ 2.25
LMNB1-204ENST00000463908 ARHGEF40Q8TER5 1519 aa29.13■■■□□ 2.25
LMNB1-204ENST00000463908 KIDINS220Q9ULH0 1771 aa29.12■■■□□ 2.25
LMNB1-204ENST00000463908 ATP10AO60312 1499 aa29.11■■■□□ 2.25
LMNB1-204ENST00000463908 TSPY4P0CV99 314 aa29.11■■■□□ 2.25
LMNB1-204ENST00000463908 TSPY10P0CW01 314 aa29.11■■■□□ 2.25
LMNB1-204ENST00000463908 ABCC5O15440 1437 aa29.11■■■□□ 2.25
LMNB1-204ENST00000463908 RTEL1-TNFRSF6BF6WH68 1400 aa29.09■■■□□ 2.25
LMNB1-204ENST00000463908 ATP7AQ04656 1500 aa29.07■■■□□ 2.24
LMNB1-204ENST00000463908 INO80Q9ULG1 1556 aaPredicted RBP29.07■■■□□ 2.24
LMNB1-204ENST00000463908 DIP2CQ9Y2E4 1556 aa29.07■■■□□ 2.24
LMNB1-204ENST00000463908 ABCA6Q8N139 1617 aa29.06■■■□□ 2.24
LMNB1-204ENST00000463908 DAPK1P53355 1430 aa29.04■■■□□ 2.24
LMNB1-204ENST00000463908 C9orf84Q5VXU9 1444 aa29.03■■■□□ 2.24
LMNB1-204ENST00000463908 SIGLEC1Q9BZZ2 1709 aa29.03■■■□□ 2.24
LMNB1-204ENST00000463908 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
LMNB1-204ENST00000463908 ARID4BQ4LE39 1312 aaPredicted RBP29.01■■■□□ 2.23
LMNB1-204ENST00000463908 DNMT1P26358 1616 aaKnown RBP29.01■■■□□ 2.23
LMNB1-204ENST00000463908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.01■■■□□ 2.23
LMNB1-204ENST00000463908 MAST1Q9Y2H9 1570 aa28.99■■■□□ 2.23
LMNB1-204ENST00000463908 CHIC2Q9UKJ5 165 aa28.97■■■□□ 2.23
LMNB1-204ENST00000463908 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
LMNB1-204ENST00000463908 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
LMNB1-204ENST00000463908 SHANK2Q9UPX8 1470 aa28.95■■■□□ 2.22
LMNB1-204ENST00000463908 A2MP01023 1474 aa28.94■■■□□ 2.22
LMNB1-204ENST00000463908 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
LMNB1-204ENST00000463908 CROCC2H7BZ55 1655 aa28.92■■■□□ 2.22
LMNB1-204ENST00000463908 ITGAEP38570 1179 aa28.91■■■□□ 2.22
LMNB1-204ENST00000463908 MLECQ14165 292 aa28.91■■■□□ 2.22
LMNB1-204ENST00000463908 RRP7BPQ9NSQ0 103 aa28.9■■■□□ 2.22
LMNB1-204ENST00000463908 AGLP35573 1532 aa28.89■■■□□ 2.22
LMNB1-204ENST00000463908 ADGBQ8N7X0 1667 aa28.88■■■□□ 2.21
LMNB1-204ENST00000463908 PLXNC1O60486 1568 aa28.88■■■□□ 2.21
LMNB1-204ENST00000463908 NCOA1Q15788 1441 aa28.87■■■□□ 2.21
LMNB1-204ENST00000463908 BCORL1Q5H9F3 1711 aa28.86■■■□□ 2.21
LMNB1-204ENST00000463908 ANKRD30AQ9BXX3 1397 aa28.85■■■□□ 2.21
LMNB1-204ENST00000463908 ADGRL2O95490 1459 aa28.84■■■□□ 2.21
LMNB1-204ENST00000463908 ADAMTSL3P82987 1691 aa28.83■■■□□ 2.21
LMNB1-204ENST00000463908 KIF15Q9NS87 1388 aa28.83■■■□□ 2.21
LMNB1-204ENST00000463908 KIF3BO15066 747 aa28.8■■■□□ 2.2
LMNB1-204ENST00000463908 DUOX2Q9NRD8 1548 aa28.78■■■□□ 2.2
LMNB1-204ENST00000463908 ROCK1Q13464 1354 aa28.77■■■□□ 2.2
LMNB1-204ENST00000463908 GGT6Q6P531 493 aa28.77■■■□□ 2.2
LMNB1-204ENST00000463908 MADDQ8WXG6 1647 aa28.72■■■□□ 2.19
LMNB1-204ENST00000463908 PTPRMP28827 1452 aa28.72■■■□□ 2.19
LMNB1-204ENST00000463908 ERBINQ96RT1 1412 aa28.69■■■□□ 2.18
LMNB1-204ENST00000463908 PPP6R1Q9UPN7 881 aa28.68■■■□□ 2.18
LMNB1-204ENST00000463908 ANKRD50Q9ULJ7 1429 aa28.66■■■□□ 2.18
LMNB1-204ENST00000463908 EIF2AK4Q9P2K8 1649 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms