RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
NCBP2-209ENST00000463783 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.44
NCBP2-209ENST00000463783 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
NCBP2-209ENST00000463783 CCDC18Q5T9S5 1454 aa12.26□□□□□ -0.45
NCBP2-209ENST00000463783 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
NCBP2-209ENST00000463783 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
NCBP2-209ENST00000463783 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
NCBP2-209ENST00000463783 TCOF1Q13428 1488 aaKnown RBP12.22□□□□□ -0.45
NCBP2-209ENST00000463783 CLSPNQ9HAW4 1339 aa12.22□□□□□ -0.45
NCBP2-209ENST00000463783 KDM5CP41229 1560 aa12.21□□□□□ -0.45
NCBP2-209ENST00000463783 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.45
NCBP2-209ENST00000463783 INO80Q9ULG1 1556 aaPredicted RBP12.21□□□□□ -0.45
NCBP2-209ENST00000463783 HIRIP3Q9BW71 556 aaPredicted RBP12.21□□□□□ -0.46
NCBP2-209ENST00000463783 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
NCBP2-209ENST00000463783 KIDINS220Q9ULH0 1771 aa12.19□□□□□ -0.46
NCBP2-209ENST00000463783 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
NCBP2-209ENST00000463783 MAST1Q9Y2H9 1570 aa12.19□□□□□ -0.46
NCBP2-209ENST00000463783 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
NCBP2-209ENST00000463783 ABCC1P33527 1531 aa12.18□□□□□ -0.46
NCBP2-209ENST00000463783 DNMT1P26358 1616 aaKnown RBP12.18□□□□□ -0.46
NCBP2-209ENST00000463783 PTPRGP23470 1445 aa12.17□□□□□ -0.46
NCBP2-209ENST00000463783 GCC2Q8IWJ2 1684 aa12.17□□□□□ -0.46
NCBP2-209ENST00000463783 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
NCBP2-209ENST00000463783 ARHGEF5Q12774 1597 aa12.16□□□□□ -0.46
NCBP2-209ENST00000463783 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
NCBP2-209ENST00000463783 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
NCBP2-209ENST00000463783 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
NCBP2-209ENST00000463783 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
NCBP2-209ENST00000463783 KDM6BO15054 1643 aa12.15□□□□□ -0.46
NCBP2-209ENST00000463783 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
NCBP2-209ENST00000463783 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
NCBP2-209ENST00000463783 PTPN23Q9H3S7 1636 aa12.15□□□□□ -0.46
NCBP2-209ENST00000463783 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.47
NCBP2-209ENST00000463783 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
NCBP2-209ENST00000463783 TSPOAP1O95153 1857 aa12.13□□□□□ -0.47
NCBP2-209ENST00000463783 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
NCBP2-209ENST00000463783 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
NCBP2-209ENST00000463783 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
NCBP2-209ENST00000463783 ABCA6Q8N139 1617 aa12.11□□□□□ -0.47
NCBP2-209ENST00000463783 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
NCBP2-209ENST00000463783 CFAP74Q9C0B2 1584 aa12.11□□□□□ -0.47
NCBP2-209ENST00000463783 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
NCBP2-209ENST00000463783 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
NCBP2-209ENST00000463783 REREQ9P2R6 1566 aa12.09□□□□□ -0.47
NCBP2-209ENST00000463783 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
NCBP2-209ENST00000463783 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
NCBP2-209ENST00000463783 ZFYVE16Q7Z3T8 1539 aa12.07□□□□□ -0.48
NCBP2-209ENST00000463783 FBLN2P98095 1184 aa12.07□□□□□ -0.48
NCBP2-209ENST00000463783 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
NCBP2-209ENST00000463783 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
NCBP2-209ENST00000463783 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
NCBP2-209ENST00000463783 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
NCBP2-209ENST00000463783 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
NCBP2-209ENST00000463783 PLCH2O75038 1416 aa12.02□□□□□ -0.48
NCBP2-209ENST00000463783 FGD6Q6ZV73 1430 aa12.02□□□□□ -0.49
NCBP2-209ENST00000463783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.49
NCBP2-209ENST00000463783 ADGRL2O95490 1459 aa12.01□□□□□ -0.49
NCBP2-209ENST00000463783 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
NCBP2-209ENST00000463783 UNC13BO14795 1591 aa12.01□□□□□ -0.49
NCBP2-209ENST00000463783 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
NCBP2-209ENST00000463783 BCANQ96GW7 911 aa12.01□□□□□ -0.49
NCBP2-209ENST00000463783 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
NCBP2-209ENST00000463783 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
NCBP2-209ENST00000463783 MYOM3Q5VTT5 1437 aa11.99□□□□□ -0.49
NCBP2-209ENST00000463783 HECW2Q9P2P5 1572 aa11.98□□□□□ -0.49
NCBP2-209ENST00000463783 NAIPQ13075 1403 aa11.97□□□□□ -0.49
NCBP2-209ENST00000463783 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
NCBP2-209ENST00000463783 ARHGEF40Q8TER5 1519 aa11.97□□□□□ -0.49
NCBP2-209ENST00000463783 NEO1Q92859 1461 aa11.96□□□□□ -0.49
NCBP2-209ENST00000463783 TRIM52Q96A61 297 aa11.96□□□□□ -0.5
NCBP2-209ENST00000463783 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
NCBP2-209ENST00000463783 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
NCBP2-209ENST00000463783 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
NCBP2-209ENST00000463783 ADAMTSL3P82987 1691 aa11.93□□□□□ -0.5
NCBP2-209ENST00000463783 ABCC5O15440 1437 aa11.92□□□□□ -0.5
NCBP2-209ENST00000463783 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
NCBP2-209ENST00000463783 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
NCBP2-209ENST00000463783 ARID3CA6NKF2 412 aa11.91□□□□□ -0.5
NCBP2-209ENST00000463783 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
NCBP2-209ENST00000463783 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
NCBP2-209ENST00000463783 FKBP8Q14318 412 aa11.9□□□□□ -0.5
NCBP2-209ENST00000463783 FOXD1Q16676 465 aa11.9□□□□□ -0.5
NCBP2-209ENST00000463783 IFT172Q9UG01 1749 aa11.9□□□□□ -0.5
NCBP2-209ENST00000463783 MROH2AA6NES4 1674 aa11.9□□□□□ -0.5
NCBP2-209ENST00000463783 CHIC2Q9UKJ5 165 aa11.9□□□□□ -0.5
NCBP2-209ENST00000463783 TRAPPC8Q9Y2L5 1435 aa11.9□□□□□ -0.5
NCBP2-209ENST00000463783 FANCAO15360 1455 aa11.9□□□□□ -0.51
NCBP2-209ENST00000463783 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
NCBP2-209ENST00000463783 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
NCBP2-209ENST00000463783 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
NCBP2-209ENST00000463783 AKNAQ7Z591 1439 aa11.89□□□□□ -0.51
NCBP2-209ENST00000463783 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
NCBP2-209ENST00000463783 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
NCBP2-209ENST00000463783 CEP152O94986 1710 aa11.89□□□□□ -0.51
NCBP2-209ENST00000463783 ATP7AQ04656 1500 aa11.88□□□□□ -0.51
NCBP2-209ENST00000463783 E9PCH4 1651 aa11.88□□□□□ -0.51
NCBP2-209ENST00000463783 DAPK1P53355 1430 aa11.88□□□□□ -0.51
NCBP2-209ENST00000463783 ZC3H13Q5T200 1668 aaKnown RBP11.87□□□□□ -0.51
NCBP2-209ENST00000463783 CYB5RLQ6IPT4 315 aa11.86□□□□□ -0.51
NCBP2-209ENST00000463783 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms