RNA–Protein interactions for RNA: ENST00000463584.1

PFDN6-206, Transcript of prefoldin subunit 6, humanhuman

TSL 3 BASIC

Gene PFDN6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-206ENST00000463584 SCAPERQ9BY12 1400 aa30.15■■■□□ 2.42
PFDN6-206ENST00000463584 CLIP1P30622 1438 aa30.14■■■□□ 2.42
PFDN6-206ENST00000463584 MAGI2Q86UL8 1455 aa30.14■■■□□ 2.42
PFDN6-206ENST00000463584 YEATS2Q9ULM3 1422 aa30.12■■■□□ 2.41
PFDN6-206ENST00000463584 PCF11O94913 1555 aaKnown RBP30.11■■■□□ 2.41
PFDN6-206ENST00000463584 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
PFDN6-206ENST00000463584 RIMS1Q86UR5 1692 aaKnown RBP30.09■■■□□ 2.41
PFDN6-206ENST00000463584 ARHGAP5Q13017 1502 aa30.07■■■□□ 2.4
PFDN6-206ENST00000463584 CCDC18Q5T9S5 1454 aa30.07■■■□□ 2.4
PFDN6-206ENST00000463584 CASKIN1Q8WXD9 1431 aa30.06■■■□□ 2.4
PFDN6-206ENST00000463584 SIGLEC1Q9BZZ2 1709 aa30.06■■■□□ 2.4
PFDN6-206ENST00000463584 ILDR1Q86SU0 546 aaPredicted RBP30■■■□□ 2.39
PFDN6-206ENST00000463584 ZNF518AQ6AHZ1 1483 aa30■■■□□ 2.39
PFDN6-206ENST00000463584 FYCO1Q9BQS8 1478 aa29.98■■■□□ 2.39
PFDN6-206ENST00000463584 CDC42BPBQ9Y5S2 1711 aa29.97■■■□□ 2.39
PFDN6-206ENST00000463584 PREX2Q70Z35 1606 aa29.96■■■□□ 2.39
PFDN6-206ENST00000463584 ATP10AO60312 1499 aa29.96■■■□□ 2.39
PFDN6-206ENST00000463584 FER1L4A9Z1Z3 1794 aa29.96■■■□□ 2.39
PFDN6-206ENST00000463584 C9orf84Q5VXU9 1444 aa29.96■■■□□ 2.39
PFDN6-206ENST00000463584 KDM5CP41229 1560 aa29.95■■■□□ 2.38
PFDN6-206ENST00000463584 MLECQ14165 292 aa29.94■■■□□ 2.38
PFDN6-206ENST00000463584 LMTK3Q96Q04 1460 aa29.93■■■□□ 2.38
PFDN6-206ENST00000463584 PLPPR3Q6T4P5 718 aa29.9■■■□□ 2.38
PFDN6-206ENST00000463584 AFAP1Q8N556 730 aa29.88■■■□□ 2.37
PFDN6-206ENST00000463584 ABCC1P33527 1531 aa29.88■■■□□ 2.37
PFDN6-206ENST00000463584 MYT1LQ9UL68 1186 aa29.86■■■□□ 2.37
PFDN6-206ENST00000463584 ARHGEF12Q9NZN5 1544 aa29.86■■■□□ 2.37
PFDN6-206ENST00000463584 CDC42BPAQ5VT25 1732 aa29.86■■■□□ 2.37
PFDN6-206ENST00000463584 ITSN2Q9NZM3 1697 aa29.85■■■□□ 2.37
PFDN6-206ENST00000463584 DIP2CQ9Y2E4 1556 aa29.84■■■□□ 2.37
PFDN6-206ENST00000463584 ABCA6Q8N139 1617 aa29.81■■■□□ 2.36
PFDN6-206ENST00000463584 MLH3Q9UHC1 1453 aa29.8■■■□□ 2.36
PFDN6-206ENST00000463584 TRAPPC8Q9Y2L5 1435 aa29.79■■■□□ 2.36
PFDN6-206ENST00000463584 REREQ9P2R6 1566 aa29.78■■■□□ 2.36
PFDN6-206ENST00000463584 HSPA2P54652 639 aa29.73■■■□□ 2.35
PFDN6-206ENST00000463584 SAMD9LQ8IVG5 1584 aa29.72■■■□□ 2.35
PFDN6-206ENST00000463584 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
PFDN6-206ENST00000463584 GPATCH8Q9UKJ3 1502 aaKnown RBP29.7■■■□□ 2.35
PFDN6-206ENST00000463584 KIDINS220Q9ULH0 1771 aa29.7■■■□□ 2.35
PFDN6-206ENST00000463584 PREX1Q8TCU6 1659 aa29.7■■■□□ 2.35
PFDN6-206ENST00000463584 SYCP2Q9BX26 1530 aa29.69■■■□□ 2.34
PFDN6-206ENST00000463584 AGLP35573 1532 aa29.68■■■□□ 2.34
PFDN6-206ENST00000463584 MTUS2Q5JR59 1369 aa29.67■■■□□ 2.34
PFDN6-206ENST00000463584 CEBPAP49715 358 aaPredicted RBP29.65■■■□□ 2.34
PFDN6-206ENST00000463584 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.34
PFDN6-206ENST00000463584 CEP162Q5TB80 1403 aa29.63■■■□□ 2.33
PFDN6-206ENST00000463584 CFDP1Q9UEE9 299 aaPredicted RBP29.61■■■□□ 2.33
PFDN6-206ENST00000463584 PLEKHH2Q8IVE3 1493 aa29.61■■■□□ 2.33
PFDN6-206ENST00000463584 FBXO41Q8TF61 875 aa29.61■■■□□ 2.33
PFDN6-206ENST00000463584 ESF1Q9H501 851 aaKnown RBP29.59■■■□□ 2.33
PFDN6-206ENST00000463584 EHBP1L1Q8N3D4 1523 aa29.59■■■□□ 2.33
PFDN6-206ENST00000463584 C3P01024 1663 aa29.58■■■□□ 2.33
PFDN6-206ENST00000463584 SPAG9O60271 1321 aaKnown RBP29.58■■■□□ 2.33
PFDN6-206ENST00000463584 KIAA1107Q9UPP5 1409 aa29.58■■■□□ 2.33
PFDN6-206ENST00000463584 HNRNPMP52272 730 aaKnown RBP eCLIP29.57■■■□□ 2.32
PFDN6-206ENST00000463584 UHRF1BP1Q6BDS2 1440 aa29.56■■■□□ 2.32
PFDN6-206ENST00000463584 ATP7AQ04656 1500 aa29.56■■■□□ 2.32
PFDN6-206ENST00000463584 TIAM1Q13009 1591 aa29.55■■■□□ 2.32
PFDN6-206ENST00000463584 PELP1Q8IZL8 1130 aaKnown RBP29.55■■■□□ 2.32
PFDN6-206ENST00000463584 INO80Q9ULG1 1556 aaPredicted RBP29.54■■■□□ 2.32
PFDN6-206ENST00000463584 SETD1BQ9UPS6 1966 aaKnown RBP29.53■■■□□ 2.32
PFDN6-206ENST00000463584 CNTLNQ9NXG0 1405 aa29.52■■■□□ 2.32
PFDN6-206ENST00000463584 SUPT6HQ7KZ85 1726 aaKnown RBP29.52■■■□□ 2.32
PFDN6-206ENST00000463584 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
PFDN6-206ENST00000463584 MROH2AA6NES4 1674 aa29.45■■■□□ 2.31
PFDN6-206ENST00000463584 A2MP01023 1474 aa29.45■■■□□ 2.3
PFDN6-206ENST00000463584 STRCQ7RTU9 1775 aa29.43■■■□□ 2.3
PFDN6-206ENST00000463584 ADGBQ8N7X0 1667 aa29.42■■■□□ 2.3
PFDN6-206ENST00000463584 ZNF644Q9H582 1327 aaPredicted RBP29.42■■■□□ 2.3
PFDN6-206ENST00000463584 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
PFDN6-206ENST00000463584 MBD5Q9P267 1494 aa29.38■■■□□ 2.29
PFDN6-206ENST00000463584 CLTCQ00610 1675 aaKnown RBP29.38■■■□□ 2.29
PFDN6-206ENST00000463584 DMRT2Q9Y5R5 561 aa29.37■■■□□ 2.29
PFDN6-206ENST00000463584 NPATQ14207 1427 aa29.36■■■□□ 2.29
PFDN6-206ENST00000463584 CERKQ8TCT0 537 aa29.34■■■□□ 2.29
PFDN6-206ENST00000463584 ZMYM3Q14202 1370 aa29.34■■■□□ 2.29
PFDN6-206ENST00000463584 CAMSAP2Q08AD1 1489 aa29.32■■■□□ 2.28
PFDN6-206ENST00000463584 RTEL1-TNFRSF6BF6WH68 1400 aa29.32■■■□□ 2.28
PFDN6-206ENST00000463584 VPS8Q8N3P4 1428 aa29.32■■■□□ 2.28
PFDN6-206ENST00000463584 GGT6Q6P531 493 aa29.31■■■□□ 2.28
PFDN6-206ENST00000463584 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
PFDN6-206ENST00000463584 LOC105371045A0A1W2PR82 267 aa29.28■■■□□ 2.28
PFDN6-206ENST00000463584 PTPRTO14522 1441 aa29.26■■■□□ 2.27
PFDN6-206ENST00000463584 NCOA1Q15788 1441 aa29.25■■■□□ 2.27
PFDN6-206ENST00000463584 MYO3AQ8NEV4 1616 aa29.25■■■□□ 2.27
PFDN6-206ENST00000463584 LRRC9Q6ZRR7 1453 aa29.24■■■□□ 2.27
PFDN6-206ENST00000463584 PPP6R1Q9UPN7 881 aa29.23■■■□□ 2.27
PFDN6-206ENST00000463584 CAMSAP1Q5T5Y3 1602 aa29.23■■■□□ 2.27
PFDN6-206ENST00000463584 DHX29Q7Z478 1369 aaKnown RBP29.22■■■□□ 2.27
PFDN6-206ENST00000463584 ZNF142P52746 1687 aaPredicted RBP29.22■■■□□ 2.27
PFDN6-206ENST00000463584 PTPRKQ15262 1439 aa29.21■■■□□ 2.27
PFDN6-206ENST00000463584 ARHGEF5Q12774 1597 aa29.21■■■□□ 2.27
PFDN6-206ENST00000463584 RSPH4AQ5TD94 716 aa29.2■■■□□ 2.27
PFDN6-206ENST00000463584 CEP170BQ9Y4F5 1589 aaPredicted RBP29.18■■■□□ 2.26
PFDN6-206ENST00000463584 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
PFDN6-206ENST00000463584 KIF3BO15066 747 aa29.14■■■□□ 2.26
PFDN6-206ENST00000463584 KDM5DQ9BY66 1539 aa29.13■■■□□ 2.25
PFDN6-206ENST00000463584 FAM135AQ9P2D6 1515 aa29.13■■■□□ 2.25
PFDN6-206ENST00000463584 TSPY4P0CV99 314 aa29.12■■■□□ 2.25
PFDN6-206ENST00000463584 TSPY10P0CW01 314 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms