RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 LRRC9Q6ZRR7 1453 aa6.82□□□□□ -1.32
VPS72-203ENST00000463470 KANK4Q5T7N3 995 aaPredicted RBP6.82□□□□□ -1.32
VPS72-203ENST00000463470 SAMD9Q5K651 1589 aa6.81□□□□□ -1.32
VPS72-203ENST00000463470 ARAP3Q8WWN8 1544 aa6.81□□□□□ -1.32
VPS72-203ENST00000463470 CD109Q6YHK3 1445 aa6.8□□□□□ -1.32
VPS72-203ENST00000463470 ADGRL1O94910 1474 aa6.79□□□□□ -1.32
VPS72-203ENST00000463470 SETD5Q9C0A6 1442 aa6.79□□□□□ -1.32
VPS72-203ENST00000463470 CFAP43Q8NDM7 1665 aa6.79□□□□□ -1.32
VPS72-203ENST00000463470 CTTNBP2Q8WZ74 1663 aa6.79□□□□□ -1.32
VPS72-203ENST00000463470 PHLDB1Q86UU1 1377 aa6.78□□□□□ -1.32
VPS72-203ENST00000463470 NUP153P49790 1475 aaKnown RBP6.78□□□□□ -1.32
VPS72-203ENST00000463470 FKBP8Q14318 412 aa6.77□□□□□ -1.33
VPS72-203ENST00000463470 ABCA9Q8IUA7 1624 aa6.76□□□□□ -1.33
VPS72-203ENST00000463470 MAPK8IP2Q13387 824 aaPredicted RBP6.76□□□□□ -1.33
VPS72-203ENST00000463470 TSPOAP1O95153 1857 aa6.76□□□□□ -1.33
VPS72-203ENST00000463470 CCDC18Q5T9S5 1454 aa6.75□□□□□ -1.33
VPS72-203ENST00000463470 RAB3GAP2Q9H2M9 1393 aa6.75□□□□□ -1.33
VPS72-203ENST00000463470 KCNH8Q96L42 1107 aa6.75□□□□□ -1.33
VPS72-203ENST00000463470 NEO1Q92859 1461 aa6.74□□□□□ -1.33
VPS72-203ENST00000463470 MTUS2Q5JR59 1369 aa6.74□□□□□ -1.33
VPS72-203ENST00000463470 PCF11O94913 1555 aaKnown RBP6.74□□□□□ -1.33
VPS72-203ENST00000463470 P3H3Q8IVL6 736 aa6.73□□□□□ -1.33
VPS72-203ENST00000463470 FHOD3Q2V2M9 1422 aa6.73□□□□□ -1.33
VPS72-203ENST00000463470 RAPGEF6Q8TEU7 1601 aa6.72□□□□□ -1.33
VPS72-203ENST00000463470 EHBP1L1Q8N3D4 1523 aa6.72□□□□□ -1.33
VPS72-203ENST00000463470 NEUROD1Q13562 356 aa6.72□□□□□ -1.33
VPS72-203ENST00000463470 FAM50AQ14320 339 aaKnown RBP6.72□□□□□ -1.33
VPS72-203ENST00000463470 FGD6Q6ZV73 1430 aa6.72□□□□□ -1.33
VPS72-203ENST00000463470 FRMPD1Q5SYB0 1578 aa6.72□□□□□ -1.33
VPS72-203ENST00000463470 ATP1B4Q9UN42 357 aaPredicted RBP6.71□□□□□ -1.34
VPS72-203ENST00000463470 HFM1A2PYH4 1435 aa6.7□□□□□ -1.34
VPS72-203ENST00000463470 MYOM3Q5VTT5 1437 aa6.7□□□□□ -1.34
VPS72-203ENST00000463470 AKNAQ7Z591 1439 aa6.7□□□□□ -1.34
VPS72-203ENST00000463470 RAPGEF3O95398 923 aa6.7□□□□□ -1.34
VPS72-203ENST00000463470 MIER1Q8N108 512 aa6.7□□□□□ -1.34
VPS72-203ENST00000463470 RNF216Q9NWF9 866 aaPredicted RBP6.7□□□□□ -1.34
VPS72-203ENST00000463470 SUPT6HQ7KZ85 1726 aaKnown RBP6.7□□□□□ -1.34
VPS72-203ENST00000463470 HECW2Q9P2P5 1572 aa6.69□□□□□ -1.34
VPS72-203ENST00000463470 MIA2Q96PC5 1412 aa6.69□□□□□ -1.34
VPS72-203ENST00000463470 ARID3CA6NKF2 412 aa6.69□□□□□ -1.34
VPS72-203ENST00000463470 ITGAEP38570 1179 aa6.69□□□□□ -1.34
VPS72-203ENST00000463470 CDK11AQ9UQ88 783 aaPredicted RBP6.69□□□□□ -1.34
VPS72-203ENST00000463470 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
VPS72-203ENST00000463470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS72-203ENST00000463470 HECW1Q76N89 1606 aa6.68□□□□□ -1.34
VPS72-203ENST00000463470 ADAMTSL3P82987 1691 aa6.68□□□□□ -1.34
VPS72-203ENST00000463470 PLCH2O75038 1416 aa6.67□□□□□ -1.34
VPS72-203ENST00000463470 PTPRMP28827 1452 aa6.67□□□□□ -1.34
VPS72-203ENST00000463470 NCOA2Q15596 1464 aa6.67□□□□□ -1.34
VPS72-203ENST00000463470 ZMYM4Q5VZL5 1548 aa6.67□□□□□ -1.34
VPS72-203ENST00000463470 PLEKHD1A6NEE1 506 aa6.67□□□□□ -1.34
VPS72-203ENST00000463470 FANCAO15360 1455 aa6.66□□□□□ -1.34
VPS72-203ENST00000463470 DENND4BO75064 1496 aaPredicted RBP6.66□□□□□ -1.34
VPS72-203ENST00000463470 TCOF1Q13428 1488 aaKnown RBP6.66□□□□□ -1.34
VPS72-203ENST00000463470 PPP1R15AO75807 674 aaPredicted RBP6.66□□□□□ -1.34
VPS72-203ENST00000463470 ILDR1Q86SU0 546 aaPredicted RBP6.66□□□□□ -1.34
VPS72-203ENST00000463470 TONSLQ96HA7 1378 aa6.66□□□□□ -1.34
VPS72-203ENST00000463470 MAGI2Q86UL8 1455 aa6.66□□□□□ -1.34
VPS72-203ENST00000463470 ARHGEF40Q8TER5 1519 aa6.66□□□□□ -1.34
VPS72-203ENST00000463470 TTC37Q6PGP7 1564 aa6.65□□□□□ -1.34
VPS72-203ENST00000463470 YEATS2Q9ULM3 1422 aa6.65□□□□□ -1.35
VPS72-203ENST00000463470 CDK13Q14004 1512 aaKnown RBP6.65□□□□□ -1.35
VPS72-203ENST00000463470 CCER2I3L3R5 266 aa6.64□□□□□ -1.35
VPS72-203ENST00000463470 MYT1Q01538 1121 aa6.64□□□□□ -1.35
VPS72-203ENST00000463470 ROCK1Q13464 1354 aa6.64□□□□□ -1.35
VPS72-203ENST00000463470 POGZQ7Z3K3 1410 aa6.64□□□□□ -1.35
VPS72-203ENST00000463470 RICTORQ6R327 1708 aa6.64□□□□□ -1.35
VPS72-203ENST00000463470 LMTK3Q96Q04 1460 aa6.63□□□□□ -1.35
VPS72-203ENST00000463470 BCORL1Q5H9F3 1711 aa6.62□□□□□ -1.35
VPS72-203ENST00000463470 SIGLEC1Q9BZZ2 1709 aa6.62□□□□□ -1.35
VPS72-203ENST00000463470 PTPN23Q9H3S7 1636 aa6.62□□□□□ -1.35
VPS72-203ENST00000463470 TROQ12816 1431 aaPredicted RBP6.62□□□□□ -1.35
VPS72-203ENST00000463470 NAIPQ13075 1403 aa6.62□□□□□ -1.35
VPS72-203ENST00000463470 SCAPERQ9BY12 1400 aa6.62□□□□□ -1.35
VPS72-203ENST00000463470 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
VPS72-203ENST00000463470 MSH5O43196 834 aa6.61□□□□□ -1.35
VPS72-203ENST00000463470 SLC4A2P04920 1241 aa6.61□□□□□ -1.35
VPS72-203ENST00000463470 MADDQ8WXG6 1647 aa6.61□□□□□ -1.35
VPS72-203ENST00000463470 KDM5CP41229 1560 aa6.61□□□□□ -1.35
VPS72-203ENST00000463470 CFAP74Q9C0B2 1584 aa6.61□□□□□ -1.35
VPS72-203ENST00000463470 ZFYVE16Q7Z3T8 1539 aa6.6□□□□□ -1.35
VPS72-203ENST00000463470 ARHGEF12Q9NZN5 1544 aa6.6□□□□□ -1.35
VPS72-203ENST00000463470 ATP10AO60312 1499 aa6.6□□□□□ -1.35
VPS72-203ENST00000463470 ANP32CO43423 234 aa6.6□□□□□ -1.35
VPS72-203ENST00000463470 EFCAB2Q5VUJ9 269 aa6.6□□□□□ -1.35
VPS72-203ENST00000463470 KIF14Q15058 1648 aa6.59□□□□□ -1.35
VPS72-203ENST00000463470 ATXN8OSP0DMR3 200 aa6.59□□□□□ -1.35
VPS72-203ENST00000463470 ZNF518AQ6AHZ1 1483 aa6.59□□□□□ -1.36
VPS72-203ENST00000463470 MLH3Q9UHC1 1453 aa6.59□□□□□ -1.36
VPS72-203ENST00000463470 GCC2Q8IWJ2 1684 aa6.58□□□□□ -1.36
VPS72-203ENST00000463470 REREQ9P2R6 1566 aa6.58□□□□□ -1.36
VPS72-203ENST00000463470 AFAP1Q8N556 730 aa6.58□□□□□ -1.36
VPS72-203ENST00000463470 SIN3AQ96ST3 1273 aa6.58□□□□□ -1.36
VPS72-203ENST00000463470 C9orf84Q5VXU9 1444 aa6.58□□□□□ -1.36
VPS72-203ENST00000463470 MYCNP04198 464 aaPredicted RBP6.57□□□□□ -1.36
VPS72-203ENST00000463470 PTPRKQ15262 1439 aa6.57□□□□□ -1.36
VPS72-203ENST00000463470 AGLP35573 1532 aa6.56□□□□□ -1.36
VPS72-203ENST00000463470 ARID4BQ4LE39 1312 aaPredicted RBP6.56□□□□□ -1.36
VPS72-203ENST00000463470 RSPH4AQ5TD94 716 aa6.56□□□□□ -1.36
VPS72-203ENST00000463470 FBXO41Q8TF61 875 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms