RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 PLEKHH2Q8IVE3 1493 aa11.15□□□□□ -0.62
EPHA4-210ENST00000463446 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
EPHA4-210ENST00000463446 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
EPHA4-210ENST00000463446 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
EPHA4-210ENST00000463446 ZNF777Q9ULD5 760 aaPredicted RBP11.13□□□□□ -0.63
EPHA4-210ENST00000463446 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
EPHA4-210ENST00000463446 GLI2P10070 1586 aa11.12□□□□□ -0.63
EPHA4-210ENST00000463446 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
EPHA4-210ENST00000463446 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
EPHA4-210ENST00000463446 RRBP1Q9P2E9 1410 aaKnown RBP11.11□□□□□ -0.63
EPHA4-210ENST00000463446 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
EPHA4-210ENST00000463446 KIAA1107Q9UPP5 1409 aa11.1□□□□□ -0.63
EPHA4-210ENST00000463446 LRRIQ1Q96JM4 1722 aa11.1□□□□□ -0.63
EPHA4-210ENST00000463446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.09□□□□□ -0.63
EPHA4-210ENST00000463446 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
EPHA4-210ENST00000463446 ABCA9Q8IUA7 1624 aa11.09□□□□□ -0.63
EPHA4-210ENST00000463446 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
EPHA4-210ENST00000463446 HRCP23327 699 aa11.08□□□□□ -0.64
EPHA4-210ENST00000463446 NEO1Q92859 1461 aa11.07□□□□□ -0.64
EPHA4-210ENST00000463446 ARHGAP5Q13017 1502 aa11.07□□□□□ -0.64
EPHA4-210ENST00000463446 FANCAO15360 1455 aa11.06□□□□□ -0.64
EPHA4-210ENST00000463446 AKNAQ7Z591 1439 aa11.05□□□□□ -0.64
EPHA4-210ENST00000463446 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
EPHA4-210ENST00000463446 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
EPHA4-210ENST00000463446 TCOF1Q13428 1488 aaKnown RBP11.05□□□□□ -0.64
EPHA4-210ENST00000463446 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
EPHA4-210ENST00000463446 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
EPHA4-210ENST00000463446 PCGF6Q9BYE7 350 aa11.04□□□□□ -0.64
EPHA4-210ENST00000463446 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
EPHA4-210ENST00000463446 ITGAEP38570 1179 aa11.02□□□□□ -0.65
EPHA4-210ENST00000463446 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
EPHA4-210ENST00000463446 PTPN23Q9H3S7 1636 aa11.02□□□□□ -0.65
EPHA4-210ENST00000463446 SCAPERQ9BY12 1400 aa11.01□□□□□ -0.65
EPHA4-210ENST00000463446 DIP2BQ9P265 1576 aa11.01□□□□□ -0.65
EPHA4-210ENST00000463446 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
EPHA4-210ENST00000463446 ZNF644Q9H582 1327 aaPredicted RBP11.01□□□□□ -0.65
EPHA4-210ENST00000463446 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
EPHA4-210ENST00000463446 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
EPHA4-210ENST00000463446 CDC42BPAQ5VT25 1732 aa11□□□□□ -0.65
EPHA4-210ENST00000463446 DENND4BO75064 1496 aaPredicted RBP11□□□□□ -0.65
EPHA4-210ENST00000463446 ADGRL1O94910 1474 aa11□□□□□ -0.65
EPHA4-210ENST00000463446 ZNF518AQ6AHZ1 1483 aa11□□□□□ -0.65
EPHA4-210ENST00000463446 MAP3K4Q9Y6R4 1608 aa10.99□□□□□ -0.65
EPHA4-210ENST00000463446 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
EPHA4-210ENST00000463446 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
EPHA4-210ENST00000463446 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
EPHA4-210ENST00000463446 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
EPHA4-210ENST00000463446 CDC42BPBQ9Y5S2 1711 aa10.98□□□□□ -0.65
EPHA4-210ENST00000463446 DAPK1P53355 1430 aa10.97□□□□□ -0.65
EPHA4-210ENST00000463446 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
EPHA4-210ENST00000463446 MAGI2Q86UL8 1455 aa10.96□□□□□ -0.65
EPHA4-210ENST00000463446 MBD5Q9P267 1494 aa10.96□□□□□ -0.65
EPHA4-210ENST00000463446 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
EPHA4-210ENST00000463446 CHIC2Q9UKJ5 165 aa10.96□□□□□ -0.65
EPHA4-210ENST00000463446 ABCC5O15440 1437 aa10.95□□□□□ -0.66
EPHA4-210ENST00000463446 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
EPHA4-210ENST00000463446 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
EPHA4-210ENST00000463446 NCOA1Q15788 1441 aa10.93□□□□□ -0.66
EPHA4-210ENST00000463446 RAPGEF3O95398 923 aa10.93□□□□□ -0.66
EPHA4-210ENST00000463446 DNMT1P26358 1616 aaKnown RBP10.93□□□□□ -0.66
EPHA4-210ENST00000463446 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
EPHA4-210ENST00000463446 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
EPHA4-210ENST00000463446 SAMD9LQ8IVG5 1584 aa10.92□□□□□ -0.66
EPHA4-210ENST00000463446 ABCC1P33527 1531 aa10.92□□□□□ -0.66
EPHA4-210ENST00000463446 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
EPHA4-210ENST00000463446 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
EPHA4-210ENST00000463446 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
EPHA4-210ENST00000463446 DHX29Q7Z478 1369 aaKnown RBP10.9□□□□□ -0.66
EPHA4-210ENST00000463446 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.66
EPHA4-210ENST00000463446 ADGRL2O95490 1459 aa10.9□□□□□ -0.66
EPHA4-210ENST00000463446 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
EPHA4-210ENST00000463446 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
EPHA4-210ENST00000463446 MAST1Q9Y2H9 1570 aa10.89□□□□□ -0.67
EPHA4-210ENST00000463446 KIF15Q9NS87 1388 aa10.89□□□□□ -0.67
EPHA4-210ENST00000463446 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
EPHA4-210ENST00000463446 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
EPHA4-210ENST00000463446 ANKRD50Q9ULJ7 1429 aa10.88□□□□□ -0.67
EPHA4-210ENST00000463446 DUOX2Q9NRD8 1548 aa10.88□□□□□ -0.67
EPHA4-210ENST00000463446 KANK1Q14678 1352 aa10.88□□□□□ -0.67
EPHA4-210ENST00000463446 CLSPNQ9HAW4 1339 aa10.87□□□□□ -0.67
EPHA4-210ENST00000463446 ARHGEF12Q9NZN5 1544 aa10.87□□□□□ -0.67
EPHA4-210ENST00000463446 ATP10AO60312 1499 aa10.87□□□□□ -0.67
EPHA4-210ENST00000463446 ERBINQ96RT1 1412 aa10.86□□□□□ -0.67
EPHA4-210ENST00000463446 NAIPQ13075 1403 aa10.85□□□□□ -0.67
EPHA4-210ENST00000463446 KIF3BO15066 747 aa10.85□□□□□ -0.67
EPHA4-210ENST00000463446 KDM5CP41229 1560 aa10.85□□□□□ -0.67
EPHA4-210ENST00000463446 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
EPHA4-210ENST00000463446 ATP7AQ04656 1500 aa10.84□□□□□ -0.67
EPHA4-210ENST00000463446 RAB3GAP2Q9H2M9 1393 aa10.84□□□□□ -0.67
EPHA4-210ENST00000463446 PLXNC1O60486 1568 aa10.83□□□□□ -0.68
EPHA4-210ENST00000463446 A2MP01023 1474 aa10.83□□□□□ -0.68
EPHA4-210ENST00000463446 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
EPHA4-210ENST00000463446 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
EPHA4-210ENST00000463446 ZMYM4Q5VZL5 1548 aa10.83□□□□□ -0.68
EPHA4-210ENST00000463446 HECW2Q9P2P5 1572 aa10.82□□□□□ -0.68
EPHA4-210ENST00000463446 ZEB1P37275 1124 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-210ENST00000463446 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
EPHA4-210ENST00000463446 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
EPHA4-210ENST00000463446 PPRC1Q5VV67 1664 aaKnown RBP10.82□□□□□ -0.68
EPHA4-210ENST00000463446 ADGBQ8N7X0 1667 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms