RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
NDUFA4-202ENST00000463308 KHSRPQ92945 711 aaKnown RBP eCLIP9.93□□□□□ -0.82
NDUFA4-202ENST00000463308 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
NDUFA4-202ENST00000463308 FKBP8Q14318 412 aa9.91□□□□□ -0.82
NDUFA4-202ENST00000463308 SOX12O15370 315 aa9.9□□□□□ -0.82
NDUFA4-202ENST00000463308 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
NDUFA4-202ENST00000463308 AXIN2Q9Y2T1 843 aa9.9□□□□□ -0.82
NDUFA4-202ENST00000463308 VASPP50552 380 aaPredicted RBP9.89□□□□□ -0.83
NDUFA4-202ENST00000463308 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
NDUFA4-202ENST00000463308 TK2O00142 265 aa9.86□□□□□ -0.83
NDUFA4-202ENST00000463308 ARHGAP33O14559 1287 aa9.86□□□□□ -0.83
NDUFA4-202ENST00000463308 NUDT7P0C024 238 aa9.86□□□□□ -0.83
NDUFA4-202ENST00000463308 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
NDUFA4-202ENST00000463308 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
NDUFA4-202ENST00000463308 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
NDUFA4-202ENST00000463308 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
NDUFA4-202ENST00000463308 HRO43593 1189 aa9.81□□□□□ -0.84
NDUFA4-202ENST00000463308 KCTD12Q96CX2 325 aaKnown RBP9.8□□□□□ -0.84
NDUFA4-202ENST00000463308 TRIM41Q8WV44 630 aa9.79□□□□□ -0.84
NDUFA4-202ENST00000463308 SLC34A2O95436 690 aa9.78□□□□□ -0.84
NDUFA4-202ENST00000463308 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
NDUFA4-202ENST00000463308 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
NDUFA4-202ENST00000463308 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
NDUFA4-202ENST00000463308 A0A0G2JS52 829 aa9.75□□□□□ -0.85
NDUFA4-202ENST00000463308 PHF8Q9UPP1 1060 aa9.75□□□□□ -0.85
NDUFA4-202ENST00000463308 KIF3CO14782 793 aa9.73□□□□□ -0.85
NDUFA4-202ENST00000463308 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
NDUFA4-202ENST00000463308 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
NDUFA4-202ENST00000463308 NLRP6P59044 892 aa9.68□□□□□ -0.86
NDUFA4-202ENST00000463308 Q6ZNB5 142 aa9.68□□□□□ -0.86
NDUFA4-202ENST00000463308 PTPN5P54829 565 aa9.67□□□□□ -0.86
NDUFA4-202ENST00000463308 PSEN2P49810 448 aa9.65□□□□□ -0.86
NDUFA4-202ENST00000463308 KCNH8Q96L42 1107 aa9.64□□□□□ -0.87
NDUFA4-202ENST00000463308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
NDUFA4-202ENST00000463308 RIOK3O14730 519 aaKnown RBP9.62□□□□□ -0.87
NDUFA4-202ENST00000463308 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
NDUFA4-202ENST00000463308 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
NDUFA4-202ENST00000463308 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
NDUFA4-202ENST00000463308 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
NDUFA4-202ENST00000463308 FBXO22Q8NEZ5 403 aa9.6□□□□□ -0.87
NDUFA4-202ENST00000463308 KDM4FA0A1W2PPD8 638 aa9.59□□□□□ -0.87
NDUFA4-202ENST00000463308 THSD4Q6ZMP0 1018 aa9.58□□□□□ -0.88
NDUFA4-202ENST00000463308 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
NDUFA4-202ENST00000463308 LAPTM4AQ15012 233 aa9.57□□□□□ -0.88
NDUFA4-202ENST00000463308 VPS9D1Q9Y2B5 631 aa9.56□□□□□ -0.88
NDUFA4-202ENST00000463308 PTCD2Q8WV60 388 aaKnown RBP9.54□□□□□ -0.88
NDUFA4-202ENST00000463308 KCNK17Q96T54 332 aa9.53□□□□□ -0.88
NDUFA4-202ENST00000463308 SLC4A5Q9BY07 1137 aa9.53□□□□□ -0.88
NDUFA4-202ENST00000463308 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
NDUFA4-202ENST00000463308 WNT2BQ93097 391 aa9.49□□□□□ -0.89
NDUFA4-202ENST00000463308 RNF25Q96BH1 459 aaPredicted RBP9.49□□□□□ -0.89
NDUFA4-202ENST00000463308 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
NDUFA4-202ENST00000463308 TAOK2Q9UL54 1235 aa9.48□□□□□ -0.89
NDUFA4-202ENST00000463308 BHMG1C9JSJ3 638 aaPredicted RBP9.47□□□□□ -0.89
NDUFA4-202ENST00000463308 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
NDUFA4-202ENST00000463308 TBC1D12O60347 775 aa9.46□□□□□ -0.9
NDUFA4-202ENST00000463308 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
NDUFA4-202ENST00000463308 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
NDUFA4-202ENST00000463308 BCL11BQ9C0K0 894 aaPredicted RBP9.43□□□□□ -0.9
NDUFA4-202ENST00000463308 LCE2BO14633 110 aa9.4□□□□□ -0.9
NDUFA4-202ENST00000463308 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
NDUFA4-202ENST00000463308 BCL2L12Q9HB09 334 aa9.39□□□□□ -0.91
NDUFA4-202ENST00000463308 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
NDUFA4-202ENST00000463308 GFRA3O60609 400 aa9.36□□□□□ -0.91
NDUFA4-202ENST00000463308 PTPREP23469 700 aa9.36□□□□□ -0.91
NDUFA4-202ENST00000463308 FOXK1P85037 733 aa9.36□□□□□ -0.91
NDUFA4-202ENST00000463308 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
NDUFA4-202ENST00000463308 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
NDUFA4-202ENST00000463308 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
NDUFA4-202ENST00000463308 KCNC4Q03721 635 aa9.32□□□□□ -0.92
NDUFA4-202ENST00000463308 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
NDUFA4-202ENST00000463308 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
NDUFA4-202ENST00000463308 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
NDUFA4-202ENST00000463308 ZNF787Q6DD87 383 aa9.29□□□□□ -0.92
NDUFA4-202ENST00000463308 STK25O00506 426 aa9.28□□□□□ -0.92
NDUFA4-202ENST00000463308 GPHNQ9NQX3 736 aaPredicted RBP9.28□□□□□ -0.92
NDUFA4-202ENST00000463308 FOSBP53539 338 aa9.25□□□□□ -0.93
NDUFA4-202ENST00000463308 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
NDUFA4-202ENST00000463308 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
NDUFA4-202ENST00000463308 DSG2Q14126 1118 aa9.22□□□□□ -0.93
NDUFA4-202ENST00000463308 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
NDUFA4-202ENST00000463308 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
NDUFA4-202ENST00000463308 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
NDUFA4-202ENST00000463308 PPP1R37O75864 691 aa9.2□□□□□ -0.94
NDUFA4-202ENST00000463308 BCAMP50895 628 aa9.2□□□□□ -0.94
NDUFA4-202ENST00000463308 JPH4Q96JJ6 628 aa9.2□□□□□ -0.94
NDUFA4-202ENST00000463308 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
NDUFA4-202ENST00000463308 PPP1R3GB7ZBB8 358 aa9.15□□□□□ -0.94
NDUFA4-202ENST00000463308 PRKD2Q9BZL6 878 aa9.15□□□□□ -0.94
NDUFA4-202ENST00000463308 WBP1LQ9NX94 342 aa9.15□□□□□ -0.94
NDUFA4-202ENST00000463308 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
NDUFA4-202ENST00000463308 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
NDUFA4-202ENST00000463308 UPF1Q92900 1129 aaKnown RBP eCLIP9.13□□□□□ -0.95
NDUFA4-202ENST00000463308 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
NDUFA4-202ENST00000463308 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
NDUFA4-202ENST00000463308 TSR3Q9UJK0 312 aaKnown RBP9.09□□□□□ -0.95
NDUFA4-202ENST00000463308 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
NDUFA4-202ENST00000463308 ONECUT3O60422 494 aaPredicted RBP9.07□□□□□ -0.96
NDUFA4-202ENST00000463308 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
NDUFA4-202ENST00000463308 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms