RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 RICTORQ6R327 1708 aa20.75■□□□□ 0.91
R3HDM1-213ENST00000463230 ARHGAP5Q13017 1502 aa20.75■□□□□ 0.91
R3HDM1-213ENST00000463230 CDC42BPBQ9Y5S2 1711 aa20.74■□□□□ 0.91
R3HDM1-213ENST00000463230 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
R3HDM1-213ENST00000463230 ADGRL1O94910 1474 aa20.74■□□□□ 0.91
R3HDM1-213ENST00000463230 CDC42BPAQ5VT25 1732 aa20.73■□□□□ 0.91
R3HDM1-213ENST00000463230 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
R3HDM1-213ENST00000463230 POGZQ7Z3K3 1410 aa20.69■□□□□ 0.9
R3HDM1-213ENST00000463230 MAGI2Q86UL8 1455 aa20.69■□□□□ 0.9
R3HDM1-213ENST00000463230 SCAPERQ9BY12 1400 aa20.69■□□□□ 0.9
R3HDM1-213ENST00000463230 RAPGEF3O95398 923 aa20.68■□□□□ 0.9
R3HDM1-213ENST00000463230 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
R3HDM1-213ENST00000463230 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
R3HDM1-213ENST00000463230 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
R3HDM1-213ENST00000463230 ITSN2Q9NZM3 1697 aa20.66■□□□□ 0.9
R3HDM1-213ENST00000463230 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
R3HDM1-213ENST00000463230 ABCC1P33527 1531 aa20.65■□□□□ 0.9
R3HDM1-213ENST00000463230 ZNF518AQ6AHZ1 1483 aa20.65■□□□□ 0.9
R3HDM1-213ENST00000463230 LRRC9Q6ZRR7 1453 aa20.64■□□□□ 0.89
R3HDM1-213ENST00000463230 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.89
R3HDM1-213ENST00000463230 KDM5CP41229 1560 aa20.62■□□□□ 0.89
R3HDM1-213ENST00000463230 ZFYVE16Q7Z3T8 1539 aa20.62■□□□□ 0.89
R3HDM1-213ENST00000463230 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
R3HDM1-213ENST00000463230 SAMD9LQ8IVG5 1584 aa20.6■□□□□ 0.89
R3HDM1-213ENST00000463230 KIAA1107Q9UPP5 1409 aa20.6■□□□□ 0.89
R3HDM1-213ENST00000463230 CFDP1Q9UEE9 299 aaPredicted RBP20.58■□□□□ 0.88
R3HDM1-213ENST00000463230 APLP2Q06481 763 aa20.56■□□□□ 0.88
R3HDM1-213ENST00000463230 HECW2Q9P2P5 1572 aa20.56■□□□□ 0.88
R3HDM1-213ENST00000463230 KDM4FA0A1W2PPD8 638 aa20.55■□□□□ 0.88
R3HDM1-213ENST00000463230 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
R3HDM1-213ENST00000463230 MLH3Q9UHC1 1453 aa20.55■□□□□ 0.88
R3HDM1-213ENST00000463230 SYCP2Q9BX26 1530 aa20.53■□□□□ 0.88
R3HDM1-213ENST00000463230 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.88
R3HDM1-213ENST00000463230 YEATS2Q9ULM3 1422 aa20.52■□□□□ 0.88
R3HDM1-213ENST00000463230 ATP10AO60312 1499 aa20.52■□□□□ 0.87
R3HDM1-213ENST00000463230 REREQ9P2R6 1566 aa20.51■□□□□ 0.87
R3HDM1-213ENST00000463230 C9orf84Q5VXU9 1444 aa20.5■□□□□ 0.87
R3HDM1-213ENST00000463230 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
R3HDM1-213ENST00000463230 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
R3HDM1-213ENST00000463230 BCORL1Q5H9F3 1711 aa20.49■□□□□ 0.87
R3HDM1-213ENST00000463230 KANK4Q5T7N3 995 aaPredicted RBP20.49■□□□□ 0.87
R3HDM1-213ENST00000463230 ADAMTSL3P82987 1691 aa20.47■□□□□ 0.87
R3HDM1-213ENST00000463230 DIP2CQ9Y2E4 1556 aa20.47■□□□□ 0.87
R3HDM1-213ENST00000463230 MIA2Q96PC5 1412 aa20.47■□□□□ 0.87
R3HDM1-213ENST00000463230 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
R3HDM1-213ENST00000463230 CAMSAP2Q08AD1 1489 aa20.45■□□□□ 0.86
R3HDM1-213ENST00000463230 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
R3HDM1-213ENST00000463230 ABCA6Q8N139 1617 aa20.45■□□□□ 0.86
R3HDM1-213ENST00000463230 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
R3HDM1-213ENST00000463230 INO80Q9ULG1 1556 aaPredicted RBP20.44■□□□□ 0.86
R3HDM1-213ENST00000463230 RSPH4AQ5TD94 716 aa20.44■□□□□ 0.86
R3HDM1-213ENST00000463230 ARHGEF5Q12774 1597 aa20.43■□□□□ 0.86
R3HDM1-213ENST00000463230 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
R3HDM1-213ENST00000463230 AGLP35573 1532 aa20.42■□□□□ 0.86
R3HDM1-213ENST00000463230 ATP7AQ04656 1500 aa20.42■□□□□ 0.86
R3HDM1-213ENST00000463230 SPAG9O60271 1321 aaKnown RBP20.42■□□□□ 0.86
R3HDM1-213ENST00000463230 ARID4BQ4LE39 1312 aaPredicted RBP20.42■□□□□ 0.86
R3HDM1-213ENST00000463230 SIGLEC1Q9BZZ2 1709 aa20.41■□□□□ 0.86
R3HDM1-213ENST00000463230 RTEL1-TNFRSF6BF6WH68 1400 aa20.41■□□□□ 0.86
R3HDM1-213ENST00000463230 CCDC141Q6ZP82 1450 aa20.4■□□□□ 0.86
R3HDM1-213ENST00000463230 MYT1LQ9UL68 1186 aa20.4■□□□□ 0.86
R3HDM1-213ENST00000463230 ZNF644Q9H582 1327 aaPredicted RBP20.4■□□□□ 0.86
R3HDM1-213ENST00000463230 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
R3HDM1-213ENST00000463230 ADGBQ8N7X0 1667 aa20.36■□□□□ 0.85
R3HDM1-213ENST00000463230 PLXNC1O60486 1568 aa20.33■□□□□ 0.85
R3HDM1-213ENST00000463230 MAST1Q9Y2H9 1570 aa20.33■□□□□ 0.85
R3HDM1-213ENST00000463230 PTPRMP28827 1452 aa20.32■□□□□ 0.84
R3HDM1-213ENST00000463230 TCOF1Q13428 1488 aaKnown RBP20.32■□□□□ 0.84
R3HDM1-213ENST00000463230 PTPN23Q9H3S7 1636 aa20.32■□□□□ 0.84
R3HDM1-213ENST00000463230 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
R3HDM1-213ENST00000463230 FER1L4A9Z1Z3 1794 aa20.32■□□□□ 0.84
R3HDM1-213ENST00000463230 A2MP01023 1474 aa20.31■□□□□ 0.84
R3HDM1-213ENST00000463230 RIMS1Q86UR5 1692 aaKnown RBP20.3■□□□□ 0.84
R3HDM1-213ENST00000463230 TSPY4P0CV99 314 aa20.28■□□□□ 0.84
R3HDM1-213ENST00000463230 TSPY10P0CW01 314 aa20.28■□□□□ 0.84
R3HDM1-213ENST00000463230 SHANK2Q9UPX8 1470 aa20.27■□□□□ 0.84
R3HDM1-213ENST00000463230 CROCC2H7BZ55 1655 aa20.25■□□□□ 0.83
R3HDM1-213ENST00000463230 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-213ENST00000463230 DHX29Q7Z478 1369 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-213ENST00000463230 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
R3HDM1-213ENST00000463230 MLECQ14165 292 aa20.23■□□□□ 0.83
R3HDM1-213ENST00000463230 PPP6R1Q9UPN7 881 aa20.21■□□□□ 0.83
R3HDM1-213ENST00000463230 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
R3HDM1-213ENST00000463230 ABCC5O15440 1437 aa20.2■□□□□ 0.82
R3HDM1-213ENST00000463230 MROH2AA6NES4 1674 aa20.2■□□□□ 0.82
R3HDM1-213ENST00000463230 DAPK1P53355 1430 aa20.19■□□□□ 0.82
R3HDM1-213ENST00000463230 EIF2AK4Q9P2K8 1649 aaKnown RBP20.17■□□□□ 0.82
R3HDM1-213ENST00000463230 ESF1Q9H501 851 aaKnown RBP20.17■□□□□ 0.82
R3HDM1-213ENST00000463230 DUOX2Q9NRD8 1548 aa20.16■□□□□ 0.82
R3HDM1-213ENST00000463230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.81
R3HDM1-213ENST00000463230 C3P01024 1663 aa20.13■□□□□ 0.81
R3HDM1-213ENST00000463230 RNF17Q9BXT8 1623 aaKnown RBP20.12■□□□□ 0.81
R3HDM1-213ENST00000463230 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
R3HDM1-213ENST00000463230 ADGRL2O95490 1459 aa20.12■□□□□ 0.81
R3HDM1-213ENST00000463230 ANKRD30AQ9BXX3 1397 aa20.11■□□□□ 0.81
R3HDM1-213ENST00000463230 ERBINQ96RT1 1412 aa20.1■□□□□ 0.81
R3HDM1-213ENST00000463230 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
R3HDM1-213ENST00000463230 SETD1BQ9UPS6 1966 aaKnown RBP20.09■□□□□ 0.81
R3HDM1-213ENST00000463230 CLTCQ00610 1675 aaKnown RBP20.09■□□□□ 0.81
R3HDM1-213ENST00000463230 KIF3BO15066 747 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms