RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-208ENST00000462970 CDC42BPAQ5VT25 1732 aa15.15■□□□□ 0.02
PSMD4-208ENST00000462970 CDC42BPBQ9Y5S2 1711 aa15.15■□□□□ 0.02
PSMD4-208ENST00000462970 APLP2Q06481 763 aa15.15■□□□□ 0.02
PSMD4-208ENST00000462970 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
PSMD4-208ENST00000462970 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
PSMD4-208ENST00000462970 ADGRL1O94910 1474 aa15.14■□□□□ 0.01
PSMD4-208ENST00000462970 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
PSMD4-208ENST00000462970 DENND4BO75064 1496 aaPredicted RBP15.13■□□□□ 0.01
PSMD4-208ENST00000462970 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
PSMD4-208ENST00000462970 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
PSMD4-208ENST00000462970 SCAPERQ9BY12 1400 aa15.11■□□□□ 0.01
PSMD4-208ENST00000462970 RICTORQ6R327 1708 aa15.11■□□□□ 0.01
PSMD4-208ENST00000462970 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
PSMD4-208ENST00000462970 MYT1LQ9UL68 1186 aa15.08■□□□□ 0
PSMD4-208ENST00000462970 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
PSMD4-208ENST00000462970 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
PSMD4-208ENST00000462970 CFDP1Q9UEE9 299 aaPredicted RBP15.07■□□□□ 0
PSMD4-208ENST00000462970 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
PSMD4-208ENST00000462970 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
PSMD4-208ENST00000462970 NCOA2Q15596 1464 aa15.06■□□□□ 0
PSMD4-208ENST00000462970 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
PSMD4-208ENST00000462970 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
PSMD4-208ENST00000462970 MAP3K1Q13233 1512 aa15.04■□□□□ -0
PSMD4-208ENST00000462970 ABCC1P33527 1531 aa15.03■□□□□ -0
PSMD4-208ENST00000462970 ZFYVE16Q7Z3T8 1539 aa15.02■□□□□ -0
PSMD4-208ENST00000462970 ARID4BQ4LE39 1312 aaPredicted RBP15.02■□□□□ -0
PSMD4-208ENST00000462970 AFAP1Q8N556 730 aa15.02■□□□□ -0
PSMD4-208ENST00000462970 ARHGEF40Q8TER5 1519 aa15.02□□□□□ -0.01
PSMD4-208ENST00000462970 SYCP2Q9BX26 1530 aa15.02□□□□□ -0.01
PSMD4-208ENST00000462970 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
PSMD4-208ENST00000462970 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
PSMD4-208ENST00000462970 ZMYM4Q5VZL5 1548 aa15.01□□□□□ -0.01
PSMD4-208ENST00000462970 ARHGEF12Q9NZN5 1544 aa15□□□□□ -0.01
PSMD4-208ENST00000462970 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
PSMD4-208ENST00000462970 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
PSMD4-208ENST00000462970 YEATS2Q9ULM3 1422 aa14.99□□□□□ -0.01
PSMD4-208ENST00000462970 PLEKHH2Q8IVE3 1493 aa14.98□□□□□ -0.01
PSMD4-208ENST00000462970 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
PSMD4-208ENST00000462970 KDM5CP41229 1560 aa14.96□□□□□ -0.01
PSMD4-208ENST00000462970 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
PSMD4-208ENST00000462970 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
PSMD4-208ENST00000462970 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
PSMD4-208ENST00000462970 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
PSMD4-208ENST00000462970 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
PSMD4-208ENST00000462970 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
PSMD4-208ENST00000462970 ABCA6Q8N139 1617 aa14.93□□□□□ -0.02
PSMD4-208ENST00000462970 MLECQ14165 292 aa14.93□□□□□ -0.02
PSMD4-208ENST00000462970 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
PSMD4-208ENST00000462970 ATP10AO60312 1499 aa14.92□□□□□ -0.02
PSMD4-208ENST00000462970 KIDINS220Q9ULH0 1771 aa14.92□□□□□ -0.02
PSMD4-208ENST00000462970 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
PSMD4-208ENST00000462970 SIGLEC1Q9BZZ2 1709 aa14.91□□□□□ -0.02
PSMD4-208ENST00000462970 C9orf84Q5VXU9 1444 aa14.91□□□□□ -0.02
PSMD4-208ENST00000462970 MLH3Q9UHC1 1453 aa14.9□□□□□ -0.02
PSMD4-208ENST00000462970 BCORL1Q5H9F3 1711 aa14.9□□□□□ -0.02
PSMD4-208ENST00000462970 ATP7AQ04656 1500 aa14.9□□□□□ -0.02
PSMD4-208ENST00000462970 CCDC141Q6ZP82 1450 aa14.88□□□□□ -0.03
PSMD4-208ENST00000462970 PTPN23Q9H3S7 1636 aa14.88□□□□□ -0.03
PSMD4-208ENST00000462970 INO80Q9ULG1 1556 aaPredicted RBP14.87□□□□□ -0.03
PSMD4-208ENST00000462970 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
PSMD4-208ENST00000462970 MIA2Q96PC5 1412 aa14.86□□□□□ -0.03
PSMD4-208ENST00000462970 MADDQ8WXG6 1647 aa14.86□□□□□ -0.03
PSMD4-208ENST00000462970 ADAMTSL3P82987 1691 aa14.86□□□□□ -0.03
PSMD4-208ENST00000462970 RIMS1Q86UR5 1692 aaKnown RBP14.86□□□□□ -0.03
PSMD4-208ENST00000462970 ARHGEF5Q12774 1597 aa14.85□□□□□ -0.03
PSMD4-208ENST00000462970 FGD6Q6ZV73 1430 aa14.84□□□□□ -0.03
PSMD4-208ENST00000462970 FER1L4A9Z1Z3 1794 aa14.84□□□□□ -0.03
PSMD4-208ENST00000462970 TSPY4P0CV99 314 aa14.84□□□□□ -0.03
PSMD4-208ENST00000462970 TSPY10P0CW01 314 aa14.84□□□□□ -0.03
PSMD4-208ENST00000462970 FAM50AQ14320 339 aaKnown RBP14.84□□□□□ -0.03
PSMD4-208ENST00000462970 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
PSMD4-208ENST00000462970 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
PSMD4-208ENST00000462970 A2MP01023 1474 aa14.81□□□□□ -0.04
PSMD4-208ENST00000462970 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
PSMD4-208ENST00000462970 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
PSMD4-208ENST00000462970 RTEL1-TNFRSF6BF6WH68 1400 aa14.79□□□□□ -0.04
PSMD4-208ENST00000462970 CROCC2H7BZ55 1655 aa14.79□□□□□ -0.04
PSMD4-208ENST00000462970 PTPRMP28827 1452 aa14.79□□□□□ -0.04
PSMD4-208ENST00000462970 ESF1Q9H501 851 aaKnown RBP14.79□□□□□ -0.04
PSMD4-208ENST00000462970 DNMT1P26358 1616 aaKnown RBP14.77□□□□□ -0.04
PSMD4-208ENST00000462970 AGLP35573 1532 aa14.77□□□□□ -0.04
PSMD4-208ENST00000462970 TCOF1Q13428 1488 aaKnown RBP14.77□□□□□ -0.04
PSMD4-208ENST00000462970 CHIC2Q9UKJ5 165 aa14.77□□□□□ -0.05
PSMD4-208ENST00000462970 GGT6Q6P531 493 aa14.76□□□□□ -0.05
PSMD4-208ENST00000462970 MAST1Q9Y2H9 1570 aa14.76□□□□□ -0.05
PSMD4-208ENST00000462970 ABCC5O15440 1437 aa14.75□□□□□ -0.05
PSMD4-208ENST00000462970 DAPK1P53355 1430 aa14.75□□□□□ -0.05
PSMD4-208ENST00000462970 PLXNC1O60486 1568 aa14.75□□□□□ -0.05
PSMD4-208ENST00000462970 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
PSMD4-208ENST00000462970 KIF3BO15066 747 aa14.73□□□□□ -0.05
PSMD4-208ENST00000462970 ITGAEP38570 1179 aa14.73□□□□□ -0.05
PSMD4-208ENST00000462970 RRP7BPQ9NSQ0 103 aa14.73□□□□□ -0.05
PSMD4-208ENST00000462970 CEBPAP49715 358 aaPredicted RBP14.72□□□□□ -0.05
PSMD4-208ENST00000462970 CLTCQ00610 1675 aaKnown RBP14.71□□□□□ -0.05
PSMD4-208ENST00000462970 SHANK2Q9UPX8 1470 aa14.71□□□□□ -0.05
PSMD4-208ENST00000462970 KIF15Q9NS87 1388 aa14.7□□□□□ -0.06
PSMD4-208ENST00000462970 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
PSMD4-208ENST00000462970 C3P01024 1663 aa14.68□□□□□ -0.06
PSMD4-208ENST00000462970 DUOX2Q9NRD8 1548 aa14.68□□□□□ -0.06
PSMD4-208ENST00000462970 HSPA2P54652 639 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms