RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
CDC42BPA-210ENST00000462553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPA-210ENST00000462553 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-210ENST00000462553 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
CDC42BPA-210ENST00000462553 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
CDC42BPA-210ENST00000462553 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
CDC42BPA-210ENST00000462553 KIF14Q15058 1648 aa13.28□□□□□ -0.28
CDC42BPA-210ENST00000462553 YEATS2Q9ULM3 1422 aa13.28□□□□□ -0.28
CDC42BPA-210ENST00000462553 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
CDC42BPA-210ENST00000462553 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
CDC42BPA-210ENST00000462553 POGZQ7Z3K3 1410 aa13.26□□□□□ -0.29
CDC42BPA-210ENST00000462553 MAGI2Q86UL8 1455 aa13.24□□□□□ -0.29
CDC42BPA-210ENST00000462553 PLCH2O75038 1416 aa13.23□□□□□ -0.29
CDC42BPA-210ENST00000462553 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-210ENST00000462553 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
CDC42BPA-210ENST00000462553 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
CDC42BPA-210ENST00000462553 KDM5CP41229 1560 aa13.21□□□□□ -0.29
CDC42BPA-210ENST00000462553 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.29
CDC42BPA-210ENST00000462553 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
CDC42BPA-210ENST00000462553 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-210ENST00000462553 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
CDC42BPA-210ENST00000462553 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
CDC42BPA-210ENST00000462553 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
CDC42BPA-210ENST00000462553 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
CDC42BPA-210ENST00000462553 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPA-210ENST00000462553 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
CDC42BPA-210ENST00000462553 ITSN2Q9NZM3 1697 aa13.16□□□□□ -0.3
CDC42BPA-210ENST00000462553 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
CDC42BPA-210ENST00000462553 CDC42BPAQ5VT25 1732 aa13.16□□□□□ -0.3
CDC42BPA-210ENST00000462553 ATP10AO60312 1499 aa13.16□□□□□ -0.3
CDC42BPA-210ENST00000462553 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
CDC42BPA-210ENST00000462553 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
CDC42BPA-210ENST00000462553 FBXO41Q8TF61 875 aa13.15□□□□□ -0.3
CDC42BPA-210ENST00000462553 ABCC1P33527 1531 aa13.14□□□□□ -0.31
CDC42BPA-210ENST00000462553 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-210ENST00000462553 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
CDC42BPA-210ENST00000462553 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
CDC42BPA-210ENST00000462553 HSPA2P54652 639 aa13.12□□□□□ -0.31
CDC42BPA-210ENST00000462553 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-210ENST00000462553 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
CDC42BPA-210ENST00000462553 CLIP1P30622 1438 aa13.11□□□□□ -0.31
CDC42BPA-210ENST00000462553 C3P01024 1663 aa13.11□□□□□ -0.31
CDC42BPA-210ENST00000462553 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
CDC42BPA-210ENST00000462553 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
CDC42BPA-210ENST00000462553 MLECQ14165 292 aa13.09□□□□□ -0.31
CDC42BPA-210ENST00000462553 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
CDC42BPA-210ENST00000462553 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
CDC42BPA-210ENST00000462553 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPA-210ENST00000462553 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPA-210ENST00000462553 AGLP35573 1532 aa13.07□□□□□ -0.32
CDC42BPA-210ENST00000462553 SAMD9LQ8IVG5 1584 aa13.07□□□□□ -0.32
CDC42BPA-210ENST00000462553 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
CDC42BPA-210ENST00000462553 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
CDC42BPA-210ENST00000462553 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
CDC42BPA-210ENST00000462553 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
CDC42BPA-210ENST00000462553 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
CDC42BPA-210ENST00000462553 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-210ENST00000462553 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-210ENST00000462553 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
CDC42BPA-210ENST00000462553 SUPT6HQ7KZ85 1726 aaKnown RBP13□□□□□ -0.33
CDC42BPA-210ENST00000462553 PLXNC1O60486 1568 aa13□□□□□ -0.33
CDC42BPA-210ENST00000462553 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
CDC42BPA-210ENST00000462553 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
CDC42BPA-210ENST00000462553 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
CDC42BPA-210ENST00000462553 ZNF142P52746 1687 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPA-210ENST00000462553 CLTCQ00610 1675 aaKnown RBP12.97□□□□□ -0.33
CDC42BPA-210ENST00000462553 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
CDC42BPA-210ENST00000462553 TIAM1Q13009 1591 aa12.95□□□□□ -0.34
CDC42BPA-210ENST00000462553 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
CDC42BPA-210ENST00000462553 CNTLNQ9NXG0 1405 aa12.95□□□□□ -0.34
CDC42BPA-210ENST00000462553 LTBP4Q8N2S1 1624 aa12.95□□□□□ -0.34
CDC42BPA-210ENST00000462553 MYO3AQ8NEV4 1616 aa12.95□□□□□ -0.34
CDC42BPA-210ENST00000462553 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
CDC42BPA-210ENST00000462553 PTPRTO14522 1441 aa12.93□□□□□ -0.34
CDC42BPA-210ENST00000462553 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
CDC42BPA-210ENST00000462553 KIAA1107Q9UPP5 1409 aa12.92□□□□□ -0.34
CDC42BPA-210ENST00000462553 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
CDC42BPA-210ENST00000462553 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
CDC42BPA-210ENST00000462553 NPATQ14207 1427 aa12.91□□□□□ -0.34
CDC42BPA-210ENST00000462553 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
CDC42BPA-210ENST00000462553 A2MP01023 1474 aa12.9□□□□□ -0.34
CDC42BPA-210ENST00000462553 CEP170BQ9Y4F5 1589 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-210ENST00000462553 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-210ENST00000462553 HNRNPMP52272 730 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDC42BPA-210ENST00000462553 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPA-210ENST00000462553 MBD5Q9P267 1494 aa12.87□□□□□ -0.35
CDC42BPA-210ENST00000462553 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
CDC42BPA-210ENST00000462553 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
CDC42BPA-210ENST00000462553 ZMYM3Q14202 1370 aa12.86□□□□□ -0.35
CDC42BPA-210ENST00000462553 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
CDC42BPA-210ENST00000462553 MTUS2Q5JR59 1369 aa12.85□□□□□ -0.35
CDC42BPA-210ENST00000462553 ESF1Q9H501 851 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-210ENST00000462553 CEP162Q5TB80 1403 aa12.85□□□□□ -0.35
CDC42BPA-210ENST00000462553 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
CDC42BPA-210ENST00000462553 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-210ENST00000462553 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-210ENST00000462553 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-210ENST00000462553 SPATA31D1Q6ZQQ2 1576 aa12.83□□□□□ -0.36
CDC42BPA-210ENST00000462553 ZNF644Q9H582 1327 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPA-210ENST00000462553 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms