RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 PHF8Q9UPP1 1060 aa7.56□□□□□ -1.2
CNOT11-203ENST00000462489 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
CNOT11-203ENST00000462489 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
CNOT11-203ENST00000462489 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
CNOT11-203ENST00000462489 MS4A4AQ96JQ5 239 aa7.54□□□□□ -1.2
CNOT11-203ENST00000462489 GTPBP6O43824 516 aaPredicted RBP7.53□□□□□ -1.2
CNOT11-203ENST00000462489 EMP3P54852 163 aa7.52□□□□□ -1.21
CNOT11-203ENST00000462489 C3orf67Q6ZVT6 689 aa7.52□□□□□ -1.21
CNOT11-203ENST00000462489 SPRYD3Q8NCJ5 442 aa7.51□□□□□ -1.21
CNOT11-203ENST00000462489 HS3ST6Q96QI5 342 aa7.51□□□□□ -1.21
CNOT11-203ENST00000462489 FAM205CA6NFA0 338 aa7.5□□□□□ -1.21
CNOT11-203ENST00000462489 BOLA1Q9Y3E2 137 aa7.5□□□□□ -1.21
CNOT11-203ENST00000462489 HOXB3P14651 431 aaPredicted RBP7.48□□□□□ -1.21
CNOT11-203ENST00000462489 PPP1R37O75864 691 aa7.45□□□□□ -1.22
CNOT11-203ENST00000462489 PAXIP1Q6ZW49 1069 aaPredicted RBP7.45□□□□□ -1.22
CNOT11-203ENST00000462489 G3V3G9 751 aa7.44□□□□□ -1.22
CNOT11-203ENST00000462489 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
CNOT11-203ENST00000462489 MICALL2Q8IY33 904 aa7.44□□□□□ -1.22
CNOT11-203ENST00000462489 TMEM92Q6UXU6 159 aa7.42□□□□□ -1.22
CNOT11-203ENST00000462489 CFAP44Q96MT7 982 aa7.42□□□□□ -1.22
CNOT11-203ENST00000462489 HOXB1P14653 301 aaPredicted RBP7.39□□□□□ -1.23
CNOT11-203ENST00000462489 KIF3CO14782 793 aa7.34□□□□□ -1.23
CNOT11-203ENST00000462489 ERBB3P21860 1342 aa7.33□□□□□ -1.24
CNOT11-203ENST00000462489 ZNF710Q8N1W2 664 aa7.33□□□□□ -1.24
CNOT11-203ENST00000462489 CRISPLD2Q9H0B8 497 aa7.33□□□□□ -1.24
CNOT11-203ENST00000462489 GPHNQ9NQX3 736 aaPredicted RBP7.33□□□□□ -1.24
CNOT11-203ENST00000462489 PDE4AP27815 886 aa7.32□□□□□ -1.24
CNOT11-203ENST00000462489 DOK7Q18PE1 504 aa7.31□□□□□ -1.24
CNOT11-203ENST00000462489 VARS2Q5ST30 1063 aaKnown RBP7.31□□□□□ -1.24
CNOT11-203ENST00000462489 CADPS2Q86UW7 1296 aa7.31□□□□□ -1.24
CNOT11-203ENST00000462489 TMC2Q8TDI7 906 aa7.31□□□□□ -1.24
CNOT11-203ENST00000462489 TSHZ2Q9NRE2 1034 aa7.31□□□□□ -1.24
CNOT11-203ENST00000462489 NCKAP5LQ9HCH0 1330 aa7.3□□□□□ -1.24
CNOT11-203ENST00000462489 C2orf72A6NCS6 295 aa7.29□□□□□ -1.24
CNOT11-203ENST00000462489 FOXK1P85037 733 aa7.29□□□□□ -1.24
CNOT11-203ENST00000462489 MFSD10Q14728 455 aa7.29□□□□□ -1.24
CNOT11-203ENST00000462489 GPR153Q6NV75 609 aa7.29□□□□□ -1.24
CNOT11-203ENST00000462489 RNF166Q96A37 237 aaPredicted RBP7.27□□□□□ -1.25
CNOT11-203ENST00000462489 HAP1P54257 671 aaPredicted RBP7.26□□□□□ -1.25
CNOT11-203ENST00000462489 ZNF687Q8N1G0 1237 aa7.26□□□□□ -1.25
CNOT11-203ENST00000462489 LARP6Q9BRS8 491 aaKnown RBP7.26□□□□□ -1.25
CNOT11-203ENST00000462489 DDX27Q96GQ7 796 aaKnown RBP7.25□□□□□ -1.25
CNOT11-203ENST00000462489 DSG2Q14126 1118 aa7.24□□□□□ -1.25
CNOT11-203ENST00000462489 VSIG10Q8N0Z9 540 aa7.24□□□□□ -1.25
CNOT11-203ENST00000462489 KHSRPQ92945 711 aaKnown RBP eCLIP7.24□□□□□ -1.25
CNOT11-203ENST00000462489 ZSWIM6Q9HCJ5 1215 aa7.24□□□□□ -1.25
CNOT11-203ENST00000462489 MYT1LQ9UL68 1186 aa7.24□□□□□ -1.25
CNOT11-203ENST00000462489 RIMBP2O15034 1052 aa7.23□□□□□ -1.25
CNOT11-203ENST00000462489 SLC34A2O95436 690 aa7.23□□□□□ -1.25
CNOT11-203ENST00000462489 ARSIQ5FYB1 569 aa7.23□□□□□ -1.25
CNOT11-203ENST00000462489 PPP1R15BQ5SWA1 713 aa7.23□□□□□ -1.25
CNOT11-203ENST00000462489 PLPP6Q8IY26 295 aa7.22□□□□□ -1.25
CNOT11-203ENST00000462489 CAMK2BQ13554 666 aa7.21□□□□□ -1.26
CNOT11-203ENST00000462489 WDR70Q9NW82 654 aa7.21□□□□□ -1.26
CNOT11-203ENST00000462489 PTCD2Q8WV60 388 aaKnown RBP7.19□□□□□ -1.26
CNOT11-203ENST00000462489 KDM2AQ9Y2K7 1162 aa7.18□□□□□ -1.26
CNOT11-203ENST00000462489 E2F4Q16254 413 aa7.17□□□□□ -1.26
CNOT11-203ENST00000462489 ANKRD13DQ6ZTN6 518 aa7.17□□□□□ -1.26
CNOT11-203ENST00000462489 ARIH1Q9Y4X5 557 aaPredicted RBP7.17□□□□□ -1.26
CNOT11-203ENST00000462489 OXER1Q8TDS5 423 aa7.16□□□□□ -1.26
CNOT11-203ENST00000462489 ZNF316A6NFI3 1004 aaPredicted RBP7.15□□□□□ -1.26
CNOT11-203ENST00000462489 SLC24A1O60721 1099 aa7.15□□□□□ -1.26
CNOT11-203ENST00000462489 POTEEQ6S8J3 1075 aa7.15□□□□□ -1.26
CNOT11-203ENST00000462489 PCDHGA4Q9Y5G9 962 aa7.15□□□□□ -1.26
CNOT11-203ENST00000462489 TBC1D12O60347 775 aa7.14□□□□□ -1.27
CNOT11-203ENST00000462489 NUDT7P0C024 238 aa7.14□□□□□ -1.27
CNOT11-203ENST00000462489 EMILIN3Q9NT22 766 aa7.14□□□□□ -1.27
CNOT11-203ENST00000462489 P3H3Q8IVL6 736 aa7.13□□□□□ -1.27
CNOT11-203ENST00000462489 LSM11P83369 360 aaKnown RBP eCLIP7.12□□□□□ -1.27
CNOT11-203ENST00000462489 ARHGEF1Q92888 912 aaKnown RBP7.12□□□□□ -1.27
CNOT11-203ENST00000462489 KDM4FA0A1W2PPD8 638 aa7.11□□□□□ -1.27
CNOT11-203ENST00000462489 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
CNOT11-203ENST00000462489 AXIN2Q9Y2T1 843 aa7.11□□□□□ -1.27
CNOT11-203ENST00000462489 PTGER2P43116 358 aa7.1□□□□□ -1.27
CNOT11-203ENST00000462489 MAP3K9P80192 1104 aa7.09□□□□□ -1.27
CNOT11-203ENST00000462489 KCNV2Q8TDN2 545 aa7.09□□□□□ -1.27
CNOT11-203ENST00000462489 ANO8Q9HCE9 1232 aaPredicted RBP7.09□□□□□ -1.27
CNOT11-203ENST00000462489 SPDYE16A6NNV3 312 aaPredicted RBP7.08□□□□□ -1.28
CNOT11-203ENST00000462489 UPF1Q92900 1129 aaKnown RBP eCLIP7.08□□□□□ -1.28
CNOT11-203ENST00000462489 DPYSL4O14531 572 aa7.06□□□□□ -1.28
CNOT11-203ENST00000462489 PDIA6Q15084 440 aa7.06□□□□□ -1.28
CNOT11-203ENST00000462489 PSDA5PKW4 1024 aaPredicted RBP7.05□□□□□ -1.28
CNOT11-203ENST00000462489 EVI5O60447 810 aa7.05□□□□□ -1.28
CNOT11-203ENST00000462489 PBX2P40425 430 aa7.02□□□□□ -1.29
CNOT11-203ENST00000462489 PLA2G2EQ9NZK7 142 aa7.01□□□□□ -1.29
CNOT11-203ENST00000462489 JPH4Q96JJ6 628 aa7□□□□□ -1.29
CNOT11-203ENST00000462489 PHF14O94880 888 aa6.99□□□□□ -1.29
CNOT11-203ENST00000462489 FOSBP53539 338 aa6.99□□□□□ -1.29
CNOT11-203ENST00000462489 ADGRD1Q6QNK2 874 aa6.99□□□□□ -1.29
CNOT11-203ENST00000462489 DMRTA1Q5VZB9 504 aa6.98□□□□□ -1.29
CNOT11-203ENST00000462489 ARHGAP33O14559 1287 aa6.97□□□□□ -1.29
CNOT11-203ENST00000462489 EPAS1Q99814 870 aa6.97□□□□□ -1.29
CNOT11-203ENST00000462489 HCSTQ9UBK5 93 aa6.97□□□□□ -1.29
CNOT11-203ENST00000462489 HRO43593 1189 aa6.96□□□□□ -1.3
CNOT11-203ENST00000462489 PSEN2P49810 448 aa6.96□□□□□ -1.3
CNOT11-203ENST00000462489 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.3
CNOT11-203ENST00000462489 FBXW7Q969H0 707 aa6.96□□□□□ -1.3
CNOT11-203ENST00000462489 TESPA1A2RU30 521 aaPredicted RBP6.95□□□□□ -1.3
CNOT11-203ENST00000462489 TYW1BQ6NUM6 668 aa6.95□□□□□ -1.3
CNOT11-203ENST00000462489 ZNF454Q8N9F8 522 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms