RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
PCOLCE-203ENST00000462260 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
PCOLCE-203ENST00000462260 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
PCOLCE-203ENST00000462260 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
PCOLCE-203ENST00000462260 ADAMTSL3P82987 1691 aa22.09■■□□□ 1.13
PCOLCE-203ENST00000462260 YEATS2Q9ULM3 1422 aa22.08■■□□□ 1.13
PCOLCE-203ENST00000462260 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.13
PCOLCE-203ENST00000462260 PREX2Q70Z35 1606 aa22.07■■□□□ 1.12
PCOLCE-203ENST00000462260 BCORL1Q5H9F3 1711 aa22.07■■□□□ 1.12
PCOLCE-203ENST00000462260 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
PCOLCE-203ENST00000462260 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
PCOLCE-203ENST00000462260 CDC42BPAQ5VT25 1732 aa22.03■■□□□ 1.12
PCOLCE-203ENST00000462260 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
PCOLCE-203ENST00000462260 SIGLEC1Q9BZZ2 1709 aa22.01■■□□□ 1.11
PCOLCE-203ENST00000462260 KDM5CP41229 1560 aa22.01■■□□□ 1.11
PCOLCE-203ENST00000462260 AFAP1Q8N556 730 aa22■■□□□ 1.11
PCOLCE-203ENST00000462260 PTPRMP28827 1452 aa22■■□□□ 1.11
PCOLCE-203ENST00000462260 ABCC1P33527 1531 aa22■■□□□ 1.11
PCOLCE-203ENST00000462260 ARHGEF12Q9NZN5 1544 aa21.99■■□□□ 1.11
PCOLCE-203ENST00000462260 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
PCOLCE-203ENST00000462260 ATP10AO60312 1499 aa21.98■■□□□ 1.11
PCOLCE-203ENST00000462260 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
PCOLCE-203ENST00000462260 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
PCOLCE-203ENST00000462260 HECW2Q9P2P5 1572 aa21.96■■□□□ 1.11
PCOLCE-203ENST00000462260 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
PCOLCE-203ENST00000462260 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
PCOLCE-203ENST00000462260 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
PCOLCE-203ENST00000462260 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
PCOLCE-203ENST00000462260 MLH3Q9UHC1 1453 aa21.93■■□□□ 1.1
PCOLCE-203ENST00000462260 SAMD9LQ8IVG5 1584 aa21.92■■□□□ 1.1
PCOLCE-203ENST00000462260 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
PCOLCE-203ENST00000462260 RIMS1Q86UR5 1692 aaKnown RBP21.9■■□□□ 1.1
PCOLCE-203ENST00000462260 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
PCOLCE-203ENST00000462260 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
PCOLCE-203ENST00000462260 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
PCOLCE-203ENST00000462260 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.09
PCOLCE-203ENST00000462260 ABCA6Q8N139 1617 aa21.88■■□□□ 1.09
PCOLCE-203ENST00000462260 REREQ9P2R6 1566 aa21.87■■□□□ 1.09
PCOLCE-203ENST00000462260 SYCP2Q9BX26 1530 aa21.87■■□□□ 1.09
PCOLCE-203ENST00000462260 MLECQ14165 292 aa21.87■■□□□ 1.09
PCOLCE-203ENST00000462260 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
PCOLCE-203ENST00000462260 KIAA1107Q9UPP5 1409 aa21.87■■□□□ 1.09
PCOLCE-203ENST00000462260 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
PCOLCE-203ENST00000462260 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
PCOLCE-203ENST00000462260 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
PCOLCE-203ENST00000462260 HNRNPMP52272 730 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCOLCE-203ENST00000462260 FER1L4A9Z1Z3 1794 aa21.84■■□□□ 1.09
PCOLCE-203ENST00000462260 AGLP35573 1532 aa21.8■■□□□ 1.08
PCOLCE-203ENST00000462260 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
PCOLCE-203ENST00000462260 NCOA2Q15596 1464 aa21.79■■□□□ 1.08
PCOLCE-203ENST00000462260 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
PCOLCE-203ENST00000462260 ZNF644Q9H582 1327 aaPredicted RBP21.78■■□□□ 1.08
PCOLCE-203ENST00000462260 LRRC9Q6ZRR7 1453 aa21.76■■□□□ 1.07
PCOLCE-203ENST00000462260 LMTK3Q96Q04 1460 aa21.76■■□□□ 1.07
PCOLCE-203ENST00000462260 MBD5Q9P267 1494 aa21.76■■□□□ 1.07
PCOLCE-203ENST00000462260 MAP3K1Q13233 1512 aa21.75■■□□□ 1.07
PCOLCE-203ENST00000462260 INO80Q9ULG1 1556 aaPredicted RBP21.75■■□□□ 1.07
PCOLCE-203ENST00000462260 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
PCOLCE-203ENST00000462260 PLPPR3Q6T4P5 718 aa21.73■■□□□ 1.07
PCOLCE-203ENST00000462260 KANK4Q5T7N3 995 aaPredicted RBP21.7■■□□□ 1.06
PCOLCE-203ENST00000462260 CEBPAP49715 358 aaPredicted RBP21.68■■□□□ 1.06
PCOLCE-203ENST00000462260 CAMSAP2Q08AD1 1489 aa21.68■■□□□ 1.06
PCOLCE-203ENST00000462260 PLXNC1O60486 1568 aa21.68■■□□□ 1.06
PCOLCE-203ENST00000462260 A2MP01023 1474 aa21.67■■□□□ 1.06
PCOLCE-203ENST00000462260 RTEL1-TNFRSF6BF6WH68 1400 aa21.67■■□□□ 1.06
PCOLCE-203ENST00000462260 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.06
PCOLCE-203ENST00000462260 ADGBQ8N7X0 1667 aa21.64■■□□□ 1.05
PCOLCE-203ENST00000462260 RSPH4AQ5TD94 716 aa21.64■■□□□ 1.05
PCOLCE-203ENST00000462260 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-203ENST00000462260 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
PCOLCE-203ENST00000462260 C3P01024 1663 aa21.63■■□□□ 1.05
PCOLCE-203ENST00000462260 SETD1BQ9UPS6 1966 aaKnown RBP21.62■■□□□ 1.05
PCOLCE-203ENST00000462260 PREX1Q8TCU6 1659 aa21.62■■□□□ 1.05
PCOLCE-203ENST00000462260 HSPA2P54652 639 aa21.61■■□□□ 1.05
PCOLCE-203ENST00000462260 ARHGEF5Q12774 1597 aa21.61■■□□□ 1.05
PCOLCE-203ENST00000462260 MYOM3Q5VTT5 1437 aa21.58■■□□□ 1.05
PCOLCE-203ENST00000462260 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
PCOLCE-203ENST00000462260 APLP2Q06481 763 aa21.58■■□□□ 1.05
PCOLCE-203ENST00000462260 DHX29Q7Z478 1369 aaKnown RBP21.58■■□□□ 1.04
PCOLCE-203ENST00000462260 MROH2AA6NES4 1674 aa21.57■■□□□ 1.04
PCOLCE-203ENST00000462260 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
PCOLCE-203ENST00000462260 ZMYM3Q14202 1370 aa21.54■■□□□ 1.04
PCOLCE-203ENST00000462260 TSPY4P0CV99 314 aa21.54■■□□□ 1.04
PCOLCE-203ENST00000462260 TSPY10P0CW01 314 aa21.54■■□□□ 1.04
PCOLCE-203ENST00000462260 GGT6Q6P531 493 aa21.54■■□□□ 1.04
PCOLCE-203ENST00000462260 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
PCOLCE-203ENST00000462260 CLTCQ00610 1675 aaKnown RBP21.51■■□□□ 1.03
PCOLCE-203ENST00000462260 NPATQ14207 1427 aa21.51■■□□□ 1.03
PCOLCE-203ENST00000462260 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
PCOLCE-203ENST00000462260 KIF3BO15066 747 aa21.48■■□□□ 1.03
PCOLCE-203ENST00000462260 ILDR1Q86SU0 546 aaPredicted RBP21.48■■□□□ 1.03
PCOLCE-203ENST00000462260 PTPN23Q9H3S7 1636 aa21.44■■□□□ 1.02
PCOLCE-203ENST00000462260 PTPRKQ15262 1439 aa21.44■■□□□ 1.02
PCOLCE-203ENST00000462260 STRCQ7RTU9 1775 aa21.43■■□□□ 1.02
PCOLCE-203ENST00000462260 FAM135AQ9P2D6 1515 aa21.43■■□□□ 1.02
PCOLCE-203ENST00000462260 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
PCOLCE-203ENST00000462260 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
PCOLCE-203ENST00000462260 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
PCOLCE-203ENST00000462260 ABCC5O15440 1437 aa21.4■■□□□ 1.02
PCOLCE-203ENST00000462260 SHANK2Q9UPX8 1470 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms