RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
CFHR3-204ENST00000461558 TAOK2Q9UL54 1235 aa14.28□□□□□ -0.12
CFHR3-204ENST00000461558 BCL11BQ9C0K0 894 aaPredicted RBP14.25□□□□□ -0.13
CFHR3-204ENST00000461558 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
CFHR3-204ENST00000461558 GPR153Q6NV75 609 aa14.23□□□□□ -0.13
CFHR3-204ENST00000461558 ZNF687Q8N1G0 1237 aa14.22□□□□□ -0.13
CFHR3-204ENST00000461558 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
CFHR3-204ENST00000461558 STK24Q9Y6E0 443 aa14.21□□□□□ -0.13
CFHR3-204ENST00000461558 NLRP6P59044 892 aa14.2□□□□□ -0.14
CFHR3-204ENST00000461558 PKD2Q13563 968 aa14.18□□□□□ -0.14
CFHR3-204ENST00000461558 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
CFHR3-204ENST00000461558 STK25O00506 426 aa14.16□□□□□ -0.14
CFHR3-204ENST00000461558 MYT1LQ9UL68 1186 aa14.16□□□□□ -0.14
CFHR3-204ENST00000461558 ARSIQ5FYB1 569 aa14.15□□□□□ -0.14
CFHR3-204ENST00000461558 RGL2O15211 777 aa14.13□□□□□ -0.15
CFHR3-204ENST00000461558 MFRPQ9BY79 579 aa14.12□□□□□ -0.15
CFHR3-204ENST00000461558 PTGER2P43116 358 aa14.09□□□□□ -0.15
CFHR3-204ENST00000461558 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
CFHR3-204ENST00000461558 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.16
CFHR3-204ENST00000461558 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
CFHR3-204ENST00000461558 C2orf72A6NCS6 295 aa14.01□□□□□ -0.17
CFHR3-204ENST00000461558 KIF3CO14782 793 aa14.01□□□□□ -0.17
CFHR3-204ENST00000461558 LSM11P83369 360 aaKnown RBP eCLIP13.97□□□□□ -0.17
CFHR3-204ENST00000461558 NUDT7P0C024 238 aa13.96□□□□□ -0.17
CFHR3-204ENST00000461558 PBX2P40425 430 aa13.92□□□□□ -0.18
CFHR3-204ENST00000461558 TMC2Q8TDI7 906 aa13.92□□□□□ -0.18
CFHR3-204ENST00000461558 SLC34A2O95436 690 aa13.91□□□□□ -0.18
CFHR3-204ENST00000461558 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
CFHR3-204ENST00000461558 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
CFHR3-204ENST00000461558 PPP1R37O75864 691 aa13.87□□□□□ -0.19
CFHR3-204ENST00000461558 HS6ST3Q8IZP7 471 aa13.85□□□□□ -0.19
CFHR3-204ENST00000461558 AXIN2Q9Y2T1 843 aa13.84□□□□□ -0.19
CFHR3-204ENST00000461558 POTEEQ6S8J3 1075 aa13.83□□□□□ -0.2
CFHR3-204ENST00000461558 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
CFHR3-204ENST00000461558 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
CFHR3-204ENST00000461558 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
CFHR3-204ENST00000461558 ADGRD1Q6QNK2 874 aa13.73□□□□□ -0.21
CFHR3-204ENST00000461558 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
CFHR3-204ENST00000461558 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
CFHR3-204ENST00000461558 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
CFHR3-204ENST00000461558 FOXK1P85037 733 aa13.68□□□□□ -0.22
CFHR3-204ENST00000461558 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
CFHR3-204ENST00000461558 PLA2G2EQ9NZK7 142 aa13.68□□□□□ -0.22
CFHR3-204ENST00000461558 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
CFHR3-204ENST00000461558 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
CFHR3-204ENST00000461558 TK2O00142 265 aa13.65□□□□□ -0.22
CFHR3-204ENST00000461558 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
CFHR3-204ENST00000461558 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
CFHR3-204ENST00000461558 TBC1D12O60347 775 aa13.62□□□□□ -0.23
CFHR3-204ENST00000461558 PSEN2P49810 448 aa13.62□□□□□ -0.23
CFHR3-204ENST00000461558 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
CFHR3-204ENST00000461558 HRO43593 1189 aa13.6□□□□□ -0.23
CFHR3-204ENST00000461558 DSG2Q14126 1118 aa13.6□□□□□ -0.23
CFHR3-204ENST00000461558 RYDENQ9NUL5 291 aaKnown RBP13.6□□□□□ -0.23
CFHR3-204ENST00000461558 KCNH8Q96L42 1107 aa13.57□□□□□ -0.24
CFHR3-204ENST00000461558 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
CFHR3-204ENST00000461558 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
CFHR3-204ENST00000461558 KCNK17Q96T54 332 aa13.52□□□□□ -0.25
CFHR3-204ENST00000461558 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
CFHR3-204ENST00000461558 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
CFHR3-204ENST00000461558 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
CFHR3-204ENST00000461558 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
CFHR3-204ENST00000461558 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
CFHR3-204ENST00000461558 ZNF454Q8N9F8 522 aa13.44□□□□□ -0.26
CFHR3-204ENST00000461558 VPS9D1Q9Y2B5 631 aa13.44□□□□□ -0.26
CFHR3-204ENST00000461558 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CFHR3-204ENST00000461558 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
CFHR3-204ENST00000461558 PDE4AP27815 886 aa13.4□□□□□ -0.26
CFHR3-204ENST00000461558 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
CFHR3-204ENST00000461558 PTPN5P54829 565 aa13.38□□□□□ -0.27
CFHR3-204ENST00000461558 SLC4A5Q9BY07 1137 aa13.37□□□□□ -0.27
CFHR3-204ENST00000461558 PTPREP23469 700 aa13.36□□□□□ -0.27
CFHR3-204ENST00000461558 FOSBP53539 338 aa13.35□□□□□ -0.27
CFHR3-204ENST00000461558 LARP6Q9BRS8 491 aaKnown RBP13.33□□□□□ -0.28
CFHR3-204ENST00000461558 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
CFHR3-204ENST00000461558 GOLGA8CPA6NN73 597 aa13.31□□□□□ -0.28
CFHR3-204ENST00000461558 BHMG1C9JSJ3 638 aaPredicted RBP13.31□□□□□ -0.28
CFHR3-204ENST00000461558 THSD4Q6ZMP0 1018 aa13.3□□□□□ -0.28
CFHR3-204ENST00000461558 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
CFHR3-204ENST00000461558 MFSD10Q14728 455 aa13.29□□□□□ -0.28
CFHR3-204ENST00000461558 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
CFHR3-204ENST00000461558 EVI5O60447 810 aa13.28□□□□□ -0.28
CFHR3-204ENST00000461558 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
CFHR3-204ENST00000461558 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
CFHR3-204ENST00000461558 WNT2BQ93097 391 aa13.27□□□□□ -0.29
CFHR3-204ENST00000461558 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
CFHR3-204ENST00000461558 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
CFHR3-204ENST00000461558 NBPF3Q9H094 633 aa13.25□□□□□ -0.29
CFHR3-204ENST00000461558 RGS20O76081 388 aa13.23□□□□□ -0.29
CFHR3-204ENST00000461558 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
CFHR3-204ENST00000461558 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
CFHR3-204ENST00000461558 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
CFHR3-204ENST00000461558 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
CFHR3-204ENST00000461558 A0A0G2JS52 829 aa13.17□□□□□ -0.3
CFHR3-204ENST00000461558 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
CFHR3-204ENST00000461558 IRX2Q9BZI1 471 aaPredicted RBP13.13□□□□□ -0.31
CFHR3-204ENST00000461558 RABGEF1Q9UJ41 708 aa13.12□□□□□ -0.31
CFHR3-204ENST00000461558 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
CFHR3-204ENST00000461558 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
CFHR3-204ENST00000461558 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms