RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
COL21A1-205ENST00000461489 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
COL21A1-205ENST00000461489 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
COL21A1-205ENST00000461489 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
COL21A1-205ENST00000461489 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
COL21A1-205ENST00000461489 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
COL21A1-205ENST00000461489 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
COL21A1-205ENST00000461489 PPP1R37O75864 691 aa11.97□□□□□ -0.49
COL21A1-205ENST00000461489 ERBB3P21860 1342 aa11.96□□□□□ -0.49
COL21A1-205ENST00000461489 C2orf72A6NCS6 295 aa11.96□□□□□ -0.49
COL21A1-205ENST00000461489 KIF3CO14782 793 aa11.94□□□□□ -0.5
COL21A1-205ENST00000461489 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
COL21A1-205ENST00000461489 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
COL21A1-205ENST00000461489 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
COL21A1-205ENST00000461489 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
COL21A1-205ENST00000461489 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
COL21A1-205ENST00000461489 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
COL21A1-205ENST00000461489 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
COL21A1-205ENST00000461489 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
COL21A1-205ENST00000461489 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
COL21A1-205ENST00000461489 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
COL21A1-205ENST00000461489 KHSRPQ92945 711 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL21A1-205ENST00000461489 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
COL21A1-205ENST00000461489 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
COL21A1-205ENST00000461489 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
COL21A1-205ENST00000461489 SLC34A2O95436 690 aa11.79□□□□□ -0.52
COL21A1-205ENST00000461489 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
COL21A1-205ENST00000461489 NUDT7P0C024 238 aa11.78□□□□□ -0.52
COL21A1-205ENST00000461489 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
COL21A1-205ENST00000461489 GPHNQ9NQX3 736 aaPredicted RBP11.77□□□□□ -0.53
COL21A1-205ENST00000461489 FOXK1P85037 733 aa11.75□□□□□ -0.53
COL21A1-205ENST00000461489 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
COL21A1-205ENST00000461489 DSG2Q14126 1118 aa11.72□□□□□ -0.53
COL21A1-205ENST00000461489 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
COL21A1-205ENST00000461489 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
COL21A1-205ENST00000461489 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
COL21A1-205ENST00000461489 TBC1D12O60347 775 aa11.65□□□□□ -0.54
COL21A1-205ENST00000461489 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
COL21A1-205ENST00000461489 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
COL21A1-205ENST00000461489 PDE4AP27815 886 aa11.63□□□□□ -0.55
COL21A1-205ENST00000461489 PBX2P40425 430 aa11.62□□□□□ -0.55
COL21A1-205ENST00000461489 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
COL21A1-205ENST00000461489 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-205ENST00000461489 LSM11P83369 360 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL21A1-205ENST00000461489 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
COL21A1-205ENST00000461489 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL21A1-205ENST00000461489 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
COL21A1-205ENST00000461489 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
COL21A1-205ENST00000461489 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
COL21A1-205ENST00000461489 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
COL21A1-205ENST00000461489 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
COL21A1-205ENST00000461489 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
COL21A1-205ENST00000461489 PTGER2P43116 358 aa11.56□□□□□ -0.56
COL21A1-205ENST00000461489 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
COL21A1-205ENST00000461489 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
COL21A1-205ENST00000461489 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
COL21A1-205ENST00000461489 DDX27Q96GQ7 796 aaKnown RBP11.54□□□□□ -0.56
COL21A1-205ENST00000461489 ARHGAP33O14559 1287 aa11.53□□□□□ -0.56
COL21A1-205ENST00000461489 BBXQ8WY36 941 aaPredicted RBP11.52□□□□□ -0.57
COL21A1-205ENST00000461489 MFSD10Q14728 455 aa11.49□□□□□ -0.57
COL21A1-205ENST00000461489 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
COL21A1-205ENST00000461489 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
COL21A1-205ENST00000461489 PSEN2P49810 448 aa11.47□□□□□ -0.57
COL21A1-205ENST00000461489 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
COL21A1-205ENST00000461489 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
COL21A1-205ENST00000461489 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
COL21A1-205ENST00000461489 EVI5O60447 810 aa11.44□□□□□ -0.58
COL21A1-205ENST00000461489 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
COL21A1-205ENST00000461489 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
COL21A1-205ENST00000461489 KCNK17Q96T54 332 aa11.44□□□□□ -0.58
COL21A1-205ENST00000461489 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-205ENST00000461489 TK2O00142 265 aa11.41□□□□□ -0.58
COL21A1-205ENST00000461489 FOSBP53539 338 aa11.4□□□□□ -0.58
COL21A1-205ENST00000461489 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
COL21A1-205ENST00000461489 ANO8Q9HCE9 1232 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-205ENST00000461489 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
COL21A1-205ENST00000461489 JPH4Q96JJ6 628 aa11.38□□□□□ -0.59
COL21A1-205ENST00000461489 BCL2L12Q9HB09 334 aa11.38□□□□□ -0.59
COL21A1-205ENST00000461489 STAC3Q96MF2 364 aa11.36□□□□□ -0.59
COL21A1-205ENST00000461489 HRO43593 1189 aa11.34□□□□□ -0.59
COL21A1-205ENST00000461489 PTPREP23469 700 aa11.34□□□□□ -0.59
COL21A1-205ENST00000461489 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
COL21A1-205ENST00000461489 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
COL21A1-205ENST00000461489 PAXIP1Q6ZW49 1069 aaPredicted RBP11.32□□□□□ -0.6
COL21A1-205ENST00000461489 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
COL21A1-205ENST00000461489 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
COL21A1-205ENST00000461489 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
COL21A1-205ENST00000461489 DPYSL4O14531 572 aa11.29□□□□□ -0.6
COL21A1-205ENST00000461489 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
COL21A1-205ENST00000461489 SLC4A5Q9BY07 1137 aa11.27□□□□□ -0.61
COL21A1-205ENST00000461489 PCDHGA10Q9Y5H3 936 aa11.27□□□□□ -0.61
COL21A1-205ENST00000461489 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
COL21A1-205ENST00000461489 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
COL21A1-205ENST00000461489 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
COL21A1-205ENST00000461489 PHF14O94880 888 aa11.24□□□□□ -0.61
COL21A1-205ENST00000461489 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
COL21A1-205ENST00000461489 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
COL21A1-205ENST00000461489 EPAS1Q99814 870 aa11.21□□□□□ -0.61
COL21A1-205ENST00000461489 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
COL21A1-205ENST00000461489 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms