RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
CLK1-206ENST00000461326 MS4A4AQ96JQ5 239 aa10.67□□□□□ -0.7
CLK1-206ENST00000461326 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
CLK1-206ENST00000461326 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
CLK1-206ENST00000461326 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
CLK1-206ENST00000461326 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.7
CLK1-206ENST00000461326 PTGER2P43116 358 aa10.63□□□□□ -0.71
CLK1-206ENST00000461326 NLRP6P59044 892 aa10.63□□□□□ -0.71
CLK1-206ENST00000461326 ARSIQ5FYB1 569 aa10.59□□□□□ -0.71
CLK1-206ENST00000461326 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
CLK1-206ENST00000461326 ZNF316A6NFI3 1004 aaPredicted RBP10.55□□□□□ -0.72
CLK1-206ENST00000461326 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
CLK1-206ENST00000461326 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
CLK1-206ENST00000461326 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
CLK1-206ENST00000461326 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLK1-206ENST00000461326 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLK1-206ENST00000461326 STK25O00506 426 aa10.48□□□□□ -0.73
CLK1-206ENST00000461326 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
CLK1-206ENST00000461326 PBX2P40425 430 aa10.47□□□□□ -0.73
CLK1-206ENST00000461326 C2orf72A6NCS6 295 aa10.46□□□□□ -0.73
CLK1-206ENST00000461326 KIF3CO14782 793 aa10.46□□□□□ -0.73
CLK1-206ENST00000461326 NUDT7P0C024 238 aa10.45□□□□□ -0.74
CLK1-206ENST00000461326 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
CLK1-206ENST00000461326 SLC34A2O95436 690 aa10.42□□□□□ -0.74
CLK1-206ENST00000461326 TMC2Q8TDI7 906 aa10.42□□□□□ -0.74
CLK1-206ENST00000461326 PCDHGA4Q9Y5G9 962 aa10.41□□□□□ -0.74
CLK1-206ENST00000461326 LHX6Q9UPM6 363 aa10.4□□□□□ -0.74
CLK1-206ENST00000461326 PSDA5PKW4 1024 aaPredicted RBP10.36□□□□□ -0.75
CLK1-206ENST00000461326 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
CLK1-206ENST00000461326 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
CLK1-206ENST00000461326 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
CLK1-206ENST00000461326 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
CLK1-206ENST00000461326 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
CLK1-206ENST00000461326 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
CLK1-206ENST00000461326 RGL2O15211 777 aa10.29□□□□□ -0.76
CLK1-206ENST00000461326 TK2O00142 265 aa10.25□□□□□ -0.77
CLK1-206ENST00000461326 PPP1R37O75864 691 aa10.25□□□□□ -0.77
CLK1-206ENST00000461326 PKD2Q13563 968 aa10.25□□□□□ -0.77
CLK1-206ENST00000461326 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
CLK1-206ENST00000461326 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
CLK1-206ENST00000461326 TBC1D12O60347 775 aa10.22□□□□□ -0.77
CLK1-206ENST00000461326 FOXK1P85037 733 aa10.22□□□□□ -0.77
CLK1-206ENST00000461326 KDM4FA0A1W2PPD8 638 aa10.21□□□□□ -0.77
CLK1-206ENST00000461326 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
CLK1-206ENST00000461326 KCNH8Q96L42 1107 aa10.21□□□□□ -0.77
CLK1-206ENST00000461326 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
CLK1-206ENST00000461326 PSEN2P49810 448 aa10.19□□□□□ -0.78
CLK1-206ENST00000461326 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
CLK1-206ENST00000461326 HRO43593 1189 aa10.18□□□□□ -0.78
CLK1-206ENST00000461326 GPHNQ9NQX3 736 aaPredicted RBP10.18□□□□□ -0.78
CLK1-206ENST00000461326 KCTD12Q96CX2 325 aaKnown RBP10.15□□□□□ -0.78
CLK1-206ENST00000461326 DSG2Q14126 1118 aa10.14□□□□□ -0.79
CLK1-206ENST00000461326 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
CLK1-206ENST00000461326 KCNK17Q96T54 332 aa10.12□□□□□ -0.79
CLK1-206ENST00000461326 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
CLK1-206ENST00000461326 RYDENQ9NUL5 291 aaKnown RBP10.06□□□□□ -0.8
CLK1-206ENST00000461326 VPS9D1Q9Y2B5 631 aa10.06□□□□□ -0.8
CLK1-206ENST00000461326 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
CLK1-206ENST00000461326 PTPN5P54829 565 aa10.04□□□□□ -0.8
CLK1-206ENST00000461326 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLK1-206ENST00000461326 CHGAP10645 457 aaKnown RBP10.03□□□□□ -0.8
CLK1-206ENST00000461326 SLC4A5Q9BY07 1137 aa10.03□□□□□ -0.8
CLK1-206ENST00000461326 BCL2L12Q9HB09 334 aa10.03□□□□□ -0.8
CLK1-206ENST00000461326 PTPREP23469 700 aa10.01□□□□□ -0.81
CLK1-206ENST00000461326 GOLGA8CPA6NN73 597 aa10□□□□□ -0.81
CLK1-206ENST00000461326 PPP1R15BQ5SWA1 713 aa10□□□□□ -0.81
CLK1-206ENST00000461326 RGS20O76081 388 aa9.99□□□□□ -0.81
CLK1-206ENST00000461326 CRISPLD2Q9H0B8 497 aa9.99□□□□□ -0.81
CLK1-206ENST00000461326 FOSBP53539 338 aa9.98□□□□□ -0.81
CLK1-206ENST00000461326 AMER1Q5JTC6 1135 aaPredicted RBP9.98□□□□□ -0.81
CLK1-206ENST00000461326 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
CLK1-206ENST00000461326 THSD4Q6ZMP0 1018 aa9.97□□□□□ -0.81
CLK1-206ENST00000461326 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
CLK1-206ENST00000461326 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
CLK1-206ENST00000461326 BHMG1C9JSJ3 638 aaPredicted RBP9.95□□□□□ -0.82
CLK1-206ENST00000461326 PDE4AP27815 886 aa9.95□□□□□ -0.82
CLK1-206ENST00000461326 WNT2BQ93097 391 aa9.95□□□□□ -0.82
CLK1-206ENST00000461326 JPH4Q96JJ6 628 aa9.95□□□□□ -0.82
CLK1-206ENST00000461326 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
CLK1-206ENST00000461326 ZBED2Q9BTP6 218 aa9.94□□□□□ -0.82
CLK1-206ENST00000461326 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
CLK1-206ENST00000461326 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
CLK1-206ENST00000461326 EVI5O60447 810 aa9.92□□□□□ -0.82
CLK1-206ENST00000461326 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
CLK1-206ENST00000461326 A0A0G2JS52 829 aa9.9□□□□□ -0.82
CLK1-206ENST00000461326 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
CLK1-206ENST00000461326 NCKAP5LQ9HCH0 1330 aa9.89□□□□□ -0.83
CLK1-206ENST00000461326 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
CLK1-206ENST00000461326 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
CLK1-206ENST00000461326 DDX27Q96GQ7 796 aaKnown RBP9.87□□□□□ -0.83
CLK1-206ENST00000461326 LARP6Q9BRS8 491 aaKnown RBP9.85□□□□□ -0.83
CLK1-206ENST00000461326 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
CLK1-206ENST00000461326 ANKK1Q8NFD2 765 aa9.84□□□□□ -0.83
CLK1-206ENST00000461326 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
CLK1-206ENST00000461326 RABGEF1Q9UJ41 708 aa9.83□□□□□ -0.84
CLK1-206ENST00000461326 MFSD10Q14728 455 aa9.8□□□□□ -0.84
CLK1-206ENST00000461326 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
CLK1-206ENST00000461326 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
CLK1-206ENST00000461326 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
CLK1-206ENST00000461326 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms