RNA–Protein interactions for RNA: ENST00000460669.5

RBBP4-207, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-207ENST00000460669 MS4A4AQ96JQ5 239 aa8.51□□□□□ -1.05
RBBP4-207ENST00000460669 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.51□□□□□ -1.05
RBBP4-207ENST00000460669 VSIG10Q8N0Z9 540 aa8.48□□□□□ -1.05
RBBP4-207ENST00000460669 PPP1R37O75864 691 aa8.47□□□□□ -1.05
RBBP4-207ENST00000460669 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.06
RBBP4-207ENST00000460669 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.06
RBBP4-207ENST00000460669 C3orf67Q6ZVT6 689 aa8.44□□□□□ -1.06
RBBP4-207ENST00000460669 KDM2AQ9Y2K7 1162 aa8.43□□□□□ -1.06
RBBP4-207ENST00000460669 G3V3G9 751 aa8.42□□□□□ -1.06
RBBP4-207ENST00000460669 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
RBBP4-207ENST00000460669 SNPHO15079 494 aa8.4□□□□□ -1.06
RBBP4-207ENST00000460669 CADPS2Q86UW7 1296 aa8.4□□□□□ -1.06
RBBP4-207ENST00000460669 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
RBBP4-207ENST00000460669 TMEM121BQ9BXQ6 578 aaPredicted RBP8.37□□□□□ -1.07
RBBP4-207ENST00000460669 MICALL2Q8IY33 904 aa8.35□□□□□ -1.07
RBBP4-207ENST00000460669 POTEB3A0JP26 581 aa8.34□□□□□ -1.07
RBBP4-207ENST00000460669 POTEBQ6S5H4 581 aa8.34□□□□□ -1.07
RBBP4-207ENST00000460669 HOXB3P14651 431 aaPredicted RBP8.33□□□□□ -1.08
RBBP4-207ENST00000460669 NCKAP5LQ9HCH0 1330 aa8.31□□□□□ -1.08
RBBP4-207ENST00000460669 TMEM92Q6UXU6 159 aa8.31□□□□□ -1.08
RBBP4-207ENST00000460669 CRISPLD2Q9H0B8 497 aa8.31□□□□□ -1.08
RBBP4-207ENST00000460669 EMP3P54852 163 aa8.3□□□□□ -1.08
RBBP4-207ENST00000460669 PDE4AP27815 886 aa8.28□□□□□ -1.08
RBBP4-207ENST00000460669 MFSD10Q14728 455 aa8.28□□□□□ -1.08
RBBP4-207ENST00000460669 FAM205CA6NFA0 338 aa8.27□□□□□ -1.09
RBBP4-207ENST00000460669 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
RBBP4-207ENST00000460669 HS3ST6Q96QI5 342 aa8.27□□□□□ -1.09
RBBP4-207ENST00000460669 WDR70Q9NW82 654 aa8.27□□□□□ -1.09
RBBP4-207ENST00000460669 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
RBBP4-207ENST00000460669 TMC2Q8TDI7 906 aa8.25□□□□□ -1.09
RBBP4-207ENST00000460669 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
RBBP4-207ENST00000460669 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
RBBP4-207ENST00000460669 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
RBBP4-207ENST00000460669 MMRN1Q13201 1228 aa8.24□□□□□ -1.09
RBBP4-207ENST00000460669 P3H3Q8IVL6 736 aa8.24□□□□□ -1.09
RBBP4-207ENST00000460669 DDX27Q96GQ7 796 aaKnown RBP8.24□□□□□ -1.09
RBBP4-207ENST00000460669 KIF3CO14782 793 aa8.23□□□□□ -1.09
RBBP4-207ENST00000460669 HOXB1P14653 301 aaPredicted RBP8.22□□□□□ -1.09
RBBP4-207ENST00000460669 C2orf72A6NCS6 295 aa8.21□□□□□ -1.1
RBBP4-207ENST00000460669 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
RBBP4-207ENST00000460669 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
RBBP4-207ENST00000460669 KCNV2Q8TDN2 545 aa8.21□□□□□ -1.1
RBBP4-207ENST00000460669 FOXK1P85037 733 aa8.2□□□□□ -1.1
RBBP4-207ENST00000460669 E2F4Q16254 413 aa8.2□□□□□ -1.1
RBBP4-207ENST00000460669 DOK7Q18PE1 504 aa8.2□□□□□ -1.1
RBBP4-207ENST00000460669 BCANQ96GW7 911 aa8.2□□□□□ -1.1
RBBP4-207ENST00000460669 CAMK2BQ13554 666 aa8.19□□□□□ -1.1
RBBP4-207ENST00000460669 DSG2Q14126 1118 aa8.19□□□□□ -1.1
RBBP4-207ENST00000460669 ERBB3P21860 1342 aa8.15□□□□□ -1.1
RBBP4-207ENST00000460669 GPR153Q6NV75 609 aa8.15□□□□□ -1.1
RBBP4-207ENST00000460669 PLPP6Q8IY26 295 aa8.15□□□□□ -1.1
RBBP4-207ENST00000460669 ARHGEF1Q92888 912 aaKnown RBP8.15□□□□□ -1.1
RBBP4-207ENST00000460669 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
RBBP4-207ENST00000460669 NBR1Q14596 966 aa8.13□□□□□ -1.11
RBBP4-207ENST00000460669 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
RBBP4-207ENST00000460669 KHSRPQ92945 711 aaKnown RBP eCLIP8.13□□□□□ -1.11
RBBP4-207ENST00000460669 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
RBBP4-207ENST00000460669 ARSIQ5FYB1 569 aa8.12□□□□□ -1.11
RBBP4-207ENST00000460669 EMILIN3Q9NT22 766 aa8.11□□□□□ -1.11
RBBP4-207ENST00000460669 ZSWIM6Q9HCJ5 1215 aa8.1□□□□□ -1.11
RBBP4-207ENST00000460669 UPF1Q92900 1129 aaKnown RBP eCLIP8.07□□□□□ -1.12
RBBP4-207ENST00000460669 DPYSL4O14531 572 aa8.06□□□□□ -1.12
RBBP4-207ENST00000460669 SLC34A2O95436 690 aa8.06□□□□□ -1.12
RBBP4-207ENST00000460669 OXER1Q8TDS5 423 aa8.06□□□□□ -1.12
RBBP4-207ENST00000460669 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
RBBP4-207ENST00000460669 PDIA6Q15084 440 aa8.04□□□□□ -1.12
RBBP4-207ENST00000460669 PTCD2Q8WV60 388 aaKnown RBP8.04□□□□□ -1.12
RBBP4-207ENST00000460669 SPDYE16A6NNV3 312 aaPredicted RBP8.03□□□□□ -1.12
RBBP4-207ENST00000460669 ZNF316A6NFI3 1004 aaPredicted RBP8.02□□□□□ -1.13
RBBP4-207ENST00000460669 SEMA3EO15041 775 aa8.02□□□□□ -1.13
RBBP4-207ENST00000460669 TESPA1A2RU30 521 aaPredicted RBP8.01□□□□□ -1.13
RBBP4-207ENST00000460669 TBC1D12O60347 775 aa8.01□□□□□ -1.13
RBBP4-207ENST00000460669 NUDT7P0C024 238 aa8.01□□□□□ -1.13
RBBP4-207ENST00000460669 MAP3K9P80192 1104 aa8.01□□□□□ -1.13
RBBP4-207ENST00000460669 PCDHGA4Q9Y5G9 962 aa8□□□□□ -1.13
RBBP4-207ENST00000460669 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
RBBP4-207ENST00000460669 EVI5O60447 810 aa7.96□□□□□ -1.14
RBBP4-207ENST00000460669 POTEEQ6S8J3 1075 aa7.96□□□□□ -1.14
RBBP4-207ENST00000460669 RNF166Q96A37 237 aaPredicted RBP7.96□□□□□ -1.14
RBBP4-207ENST00000460669 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
RBBP4-207ENST00000460669 MLLT3P42568 568 aaPredicted RBP7.95□□□□□ -1.14
RBBP4-207ENST00000460669 PTGER2P43116 358 aa7.95□□□□□ -1.14
RBBP4-207ENST00000460669 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
RBBP4-207ENST00000460669 MYT1LQ9UL68 1186 aa7.95□□□□□ -1.14
RBBP4-207ENST00000460669 KDM4FA0A1W2PPD8 638 aa7.94□□□□□ -1.14
RBBP4-207ENST00000460669 SMYD5Q6GMV2 418 aa7.94□□□□□ -1.14
RBBP4-207ENST00000460669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.94□□□□□ -1.14
RBBP4-207ENST00000460669 ANO8Q9HCE9 1232 aaPredicted RBP7.94□□□□□ -1.14
RBBP4-207ENST00000460669 AXIN2Q9Y2T1 843 aa7.93□□□□□ -1.14
RBBP4-207ENST00000460669 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
RBBP4-207ENST00000460669 LMOD2Q6P5Q4 547 aa7.92□□□□□ -1.14
RBBP4-207ENST00000460669 DDX12PQ92771 950 aa7.89□□□□□ -1.15
RBBP4-207ENST00000460669 GRXCR2A6NFK2 248 aa7.88□□□□□ -1.15
RBBP4-207ENST00000460669 TPRNQ4KMQ1 711 aa7.88□□□□□ -1.15
RBBP4-207ENST00000460669 PHF14O94880 888 aa7.87□□□□□ -1.15
RBBP4-207ENST00000460669 OSBPP22059 807 aa7.87□□□□□ -1.15
RBBP4-207ENST00000460669 JPH4Q96JJ6 628 aa7.87□□□□□ -1.15
RBBP4-207ENST00000460669 PBX2P40425 430 aa7.86□□□□□ -1.15
RBBP4-207ENST00000460669 RBM26Q5T8P6 1007 aaKnown RBP7.86□□□□□ -1.15
RBBP4-207ENST00000460669 ZNF454Q8N9F8 522 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms