RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 FAM69CQ0P6D2 419 aa16.49■□□□□ 0.23
FN1-214ENST00000460217 CD109Q6YHK3 1445 aa16.49■□□□□ 0.23
FN1-214ENST00000460217 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
FN1-214ENST00000460217 RRBP1Q9P2E9 1410 aaKnown RBP16.47■□□□□ 0.23
FN1-214ENST00000460217 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
FN1-214ENST00000460217 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
FN1-214ENST00000460217 CFAP74Q9C0B2 1584 aa16.45■□□□□ 0.22
FN1-214ENST00000460217 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
FN1-214ENST00000460217 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
FN1-214ENST00000460217 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
FN1-214ENST00000460217 FANCAO15360 1455 aa16.43■□□□□ 0.22
FN1-214ENST00000460217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.43■□□□□ 0.22
FN1-214ENST00000460217 TSPOAP1O95153 1857 aa16.42■□□□□ 0.22
FN1-214ENST00000460217 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
FN1-214ENST00000460217 SAMD9LQ8IVG5 1584 aa16.42■□□□□ 0.22
FN1-214ENST00000460217 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
FN1-214ENST00000460217 NEO1Q92859 1461 aa16.42■□□□□ 0.22
FN1-214ENST00000460217 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
FN1-214ENST00000460217 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
FN1-214ENST00000460217 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
FN1-214ENST00000460217 ABCC1P33527 1531 aa16.39■□□□□ 0.21
FN1-214ENST00000460217 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
FN1-214ENST00000460217 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
FN1-214ENST00000460217 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
FN1-214ENST00000460217 ARHGEF5Q12774 1597 aa16.35■□□□□ 0.21
FN1-214ENST00000460217 ZNF777Q9ULD5 760 aaPredicted RBP16.35■□□□□ 0.21
FN1-214ENST00000460217 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
FN1-214ENST00000460217 MBD5Q9P267 1494 aa16.35■□□□□ 0.21
FN1-214ENST00000460217 SYCP2Q9BX26 1530 aa16.34■□□□□ 0.21
FN1-214ENST00000460217 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
FN1-214ENST00000460217 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
FN1-214ENST00000460217 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
FN1-214ENST00000460217 RSPH4AQ5TD94 716 aa16.32■□□□□ 0.2
FN1-214ENST00000460217 ARHGEF12Q9NZN5 1544 aa16.32■□□□□ 0.2
FN1-214ENST00000460217 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
FN1-214ENST00000460217 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
FN1-214ENST00000460217 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
FN1-214ENST00000460217 ABCC5O15440 1437 aa16.29■□□□□ 0.2
FN1-214ENST00000460217 DAPK1P53355 1430 aa16.29■□□□□ 0.2
FN1-214ENST00000460217 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
FN1-214ENST00000460217 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
FN1-214ENST00000460217 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
FN1-214ENST00000460217 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
FN1-214ENST00000460217 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
FN1-214ENST00000460217 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
FN1-214ENST00000460217 KDM5CP41229 1560 aa16.27■□□□□ 0.2
FN1-214ENST00000460217 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
FN1-214ENST00000460217 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
FN1-214ENST00000460217 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
FN1-214ENST00000460217 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
FN1-214ENST00000460217 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
FN1-214ENST00000460217 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
FN1-214ENST00000460217 COL17A1Q9UMD9 1497 aaPredicted RBP16.22■□□□□ 0.19
FN1-214ENST00000460217 INO80Q9ULG1 1556 aaPredicted RBP16.22■□□□□ 0.19
FN1-214ENST00000460217 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
FN1-214ENST00000460217 C9orf84Q5VXU9 1444 aa16.22■□□□□ 0.19
FN1-214ENST00000460217 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
FN1-214ENST00000460217 ZFYVE16Q7Z3T8 1539 aa16.21■□□□□ 0.19
FN1-214ENST00000460217 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
FN1-214ENST00000460217 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
FN1-214ENST00000460217 AFAP1Q8N556 730 aa16.21■□□□□ 0.19
FN1-214ENST00000460217 ROCK1Q13464 1354 aa16.21■□□□□ 0.19
FN1-214ENST00000460217 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
FN1-214ENST00000460217 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
FN1-214ENST00000460217 KDM6BO15054 1643 aa16.19■□□□□ 0.18
FN1-214ENST00000460217 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
FN1-214ENST00000460217 RAPGEF3O95398 923 aa16.19■□□□□ 0.18
FN1-214ENST00000460217 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
FN1-214ENST00000460217 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
FN1-214ENST00000460217 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
FN1-214ENST00000460217 MAGI2Q86UL8 1455 aa16.18■□□□□ 0.18
FN1-214ENST00000460217 ITGAEP38570 1179 aa16.18■□□□□ 0.18
FN1-214ENST00000460217 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
FN1-214ENST00000460217 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
FN1-214ENST00000460217 HFM1A2PYH4 1435 aa16.15■□□□□ 0.18
FN1-214ENST00000460217 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.18
FN1-214ENST00000460217 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
FN1-214ENST00000460217 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
FN1-214ENST00000460217 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
FN1-214ENST00000460217 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
FN1-214ENST00000460217 NAIPQ13075 1403 aa16.11■□□□□ 0.17
FN1-214ENST00000460217 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
FN1-214ENST00000460217 DUOX2Q9NRD8 1548 aa16.11■□□□□ 0.17
FN1-214ENST00000460217 DIP2CQ9Y2E4 1556 aa16.11■□□□□ 0.17
FN1-214ENST00000460217 YEATS2Q9ULM3 1422 aa16.09■□□□□ 0.17
FN1-214ENST00000460217 REREQ9P2R6 1566 aa16.09■□□□□ 0.17
FN1-214ENST00000460217 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.16
FN1-214ENST00000460217 MYT1LQ9UL68 1186 aa16.07■□□□□ 0.16
FN1-214ENST00000460217 ERBINQ96RT1 1412 aa16.07■□□□□ 0.16
FN1-214ENST00000460217 SETD5Q9C0A6 1442 aa16.07■□□□□ 0.16
FN1-214ENST00000460217 ANKRD50Q9ULJ7 1429 aa16.07■□□□□ 0.16
FN1-214ENST00000460217 ATP10AO60312 1499 aa16.06■□□□□ 0.16
FN1-214ENST00000460217 A2MP01023 1474 aa16.06■□□□□ 0.16
FN1-214ENST00000460217 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
FN1-214ENST00000460217 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
FN1-214ENST00000460217 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
FN1-214ENST00000460217 HRCP23327 699 aa16.04■□□□□ 0.16
FN1-214ENST00000460217 RAB3GAP2Q9H2M9 1393 aa16.02■□□□□ 0.16
FN1-214ENST00000460217 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
FN1-214ENST00000460217 AGLP35573 1532 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms