RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 POGZQ7Z3K3 1410 aa33.76■■■□□ 2.99
SRM-202ENST00000459997 ZFYVE16Q7Z3T8 1539 aa33.73■■■□□ 2.99
SRM-202ENST00000459997 ADAMTSL3P82987 1691 aa33.72■■■□□ 2.99
SRM-202ENST00000459997 ARID4BQ4LE39 1312 aaPredicted RBP33.72■■■□□ 2.99
SRM-202ENST00000459997 BCORL1Q5H9F3 1711 aa33.7■■■□□ 2.99
SRM-202ENST00000459997 MAGI2Q86UL8 1455 aa33.7■■■□□ 2.99
SRM-202ENST00000459997 CDC42BPBQ9Y5S2 1711 aa33.69■■■□□ 2.98
SRM-202ENST00000459997 YEATS2Q9ULM3 1422 aa33.69■■■□□ 2.98
SRM-202ENST00000459997 PREX2Q70Z35 1606 aa33.68■■■□□ 2.98
SRM-202ENST00000459997 CEP162Q5TB80 1403 aa33.67■■■□□ 2.98
SRM-202ENST00000459997 MADDQ8WXG6 1647 aa33.61■■■□□ 2.97
SRM-202ENST00000459997 HECW2Q9P2P5 1572 aa33.61■■■□□ 2.97
SRM-202ENST00000459997 ZNF518AQ6AHZ1 1483 aa33.61■■■□□ 2.97
SRM-202ENST00000459997 CDC42BPAQ5VT25 1732 aa33.6■■■□□ 2.97
SRM-202ENST00000459997 PTPRMP28827 1452 aa33.6■■■□□ 2.97
SRM-202ENST00000459997 SIGLEC1Q9BZZ2 1709 aa33.59■■■□□ 2.97
SRM-202ENST00000459997 KDM5CP41229 1560 aa33.55■■■□□ 2.96
SRM-202ENST00000459997 ABCC1P33527 1531 aa33.54■■■□□ 2.96
SRM-202ENST00000459997 AFAP1Q8N556 730 aa33.53■■■□□ 2.96
SRM-202ENST00000459997 ATP10AO60312 1499 aa33.52■■■□□ 2.96
SRM-202ENST00000459997 RIMS1Q86UR5 1692 aaKnown RBP33.51■■■□□ 2.95
SRM-202ENST00000459997 ITSN2Q9NZM3 1697 aa33.51■■■□□ 2.95
SRM-202ENST00000459997 C9orf84Q5VXU9 1444 aa33.5■■■□□ 2.95
SRM-202ENST00000459997 MTUS2Q5JR59 1369 aa33.49■■■□□ 2.95
SRM-202ENST00000459997 ARHGEF12Q9NZN5 1544 aa33.48■■■□□ 2.95
SRM-202ENST00000459997 LOC105371045A0A1W2PR82 267 aa33.48■■■□□ 2.95
SRM-202ENST00000459997 GPATCH8Q9UKJ3 1502 aaKnown RBP33.47■■■□□ 2.95
SRM-202ENST00000459997 MYT1LQ9UL68 1186 aa33.46■■■□□ 2.95
SRM-202ENST00000459997 TRAPPC8Q9Y2L5 1435 aa33.45■■■□□ 2.95
SRM-202ENST00000459997 SAMD9LQ8IVG5 1584 aa33.43■■■□□ 2.94
SRM-202ENST00000459997 MLECQ14165 292 aa33.43■■■□□ 2.94
SRM-202ENST00000459997 ZNF777Q9ULD5 760 aaPredicted RBP33.43■■■□□ 2.94
SRM-202ENST00000459997 MLH3Q9UHC1 1453 aa33.42■■■□□ 2.94
SRM-202ENST00000459997 EHBP1L1Q8N3D4 1523 aa33.42■■■□□ 2.94
SRM-202ENST00000459997 DIP2CQ9Y2E4 1556 aa33.42■■■□□ 2.94
SRM-202ENST00000459997 CCNB3Q8WWL7 1395 aa33.41■■■□□ 2.94
SRM-202ENST00000459997 ABCA6Q8N139 1617 aa33.39■■■□□ 2.94
SRM-202ENST00000459997 FER1L4A9Z1Z3 1794 aa33.39■■■□□ 2.94
SRM-202ENST00000459997 SYCP2Q9BX26 1530 aa33.37■■■□□ 2.93
SRM-202ENST00000459997 CFDP1Q9UEE9 299 aaPredicted RBP33.35■■■□□ 2.93
SRM-202ENST00000459997 REREQ9P2R6 1566 aa33.34■■■□□ 2.93
SRM-202ENST00000459997 TIAM1Q13009 1591 aa33.33■■■□□ 2.93
SRM-202ENST00000459997 KIDINS220Q9ULH0 1771 aa33.32■■■□□ 2.92
SRM-202ENST00000459997 PLPPR3Q6T4P5 718 aa33.3■■■□□ 2.92
SRM-202ENST00000459997 PLEKHH2Q8IVE3 1493 aa33.3■■■□□ 2.92
SRM-202ENST00000459997 VPS8Q8N3P4 1428 aa33.29■■■□□ 2.92
SRM-202ENST00000459997 HNRNPMP52272 730 aaKnown RBP eCLIP33.29■■■□□ 2.92
SRM-202ENST00000459997 KIAA1107Q9UPP5 1409 aa33.28■■■□□ 2.92
SRM-202ENST00000459997 SUPT6HQ7KZ85 1726 aaKnown RBP33.23■■■□□ 2.91
SRM-202ENST00000459997 LMTK3Q96Q04 1460 aa33.23■■■□□ 2.91
SRM-202ENST00000459997 SPAG9O60271 1321 aaKnown RBP33.23■■■□□ 2.91
SRM-202ENST00000459997 AGLP35573 1532 aa33.23■■■□□ 2.91
SRM-202ENST00000459997 NCOA2Q15596 1464 aa33.19■■■□□ 2.9
SRM-202ENST00000459997 ATP7AQ04656 1500 aa33.19■■■□□ 2.9
SRM-202ENST00000459997 ZNF644Q9H582 1327 aaPredicted RBP33.18■■■□□ 2.9
SRM-202ENST00000459997 INO80Q9ULG1 1556 aaPredicted RBP33.17■■■□□ 2.9
SRM-202ENST00000459997 LRRC9Q6ZRR7 1453 aa33.12■■■□□ 2.89
SRM-202ENST00000459997 MBD5Q9P267 1494 aa33.11■■■□□ 2.89
SRM-202ENST00000459997 CEBPAP49715 358 aaPredicted RBP33.1■■■□□ 2.89
SRM-202ENST00000459997 MAP3K1Q13233 1512 aa33.07■■■□□ 2.88
SRM-202ENST00000459997 ESF1Q9H501 851 aaKnown RBP33.06■■■□□ 2.88
SRM-202ENST00000459997 CAMSAP2Q08AD1 1489 aa33.05■■■□□ 2.88
SRM-202ENST00000459997 A2MP01023 1474 aa33.05■■■□□ 2.88
SRM-202ENST00000459997 PLXNC1O60486 1568 aa33.04■■■□□ 2.88
SRM-202ENST00000459997 PREX1Q8TCU6 1659 aa33.04■■■□□ 2.88
SRM-202ENST00000459997 HSPA2P54652 639 aa33.04■■■□□ 2.88
SRM-202ENST00000459997 C3P01024 1663 aa33.04■■■□□ 2.88
SRM-202ENST00000459997 ADGBQ8N7X0 1667 aa33.02■■■□□ 2.88
SRM-202ENST00000459997 CCDC141Q6ZP82 1450 aa32.99■■■□□ 2.87
SRM-202ENST00000459997 KANK4Q5T7N3 995 aaPredicted RBP32.99■■■□□ 2.87
SRM-202ENST00000459997 CNTLNQ9NXG0 1405 aa32.99■■■□□ 2.87
SRM-202ENST00000459997 RTEL1-TNFRSF6BF6WH68 1400 aa32.97■■■□□ 2.87
SRM-202ENST00000459997 ARHGEF5Q12774 1597 aa32.92■■■□□ 2.86
SRM-202ENST00000459997 MROH2AA6NES4 1674 aa32.92■■■□□ 2.86
SRM-202ENST00000459997 UHRF1BP1Q6BDS2 1440 aa32.92■■■□□ 2.86
SRM-202ENST00000459997 RSPH4AQ5TD94 716 aa32.91■■■□□ 2.86
SRM-202ENST00000459997 ILDR1Q86SU0 546 aaPredicted RBP32.89■■■□□ 2.86
SRM-202ENST00000459997 CLTCQ00610 1675 aaKnown RBP32.88■■■□□ 2.85
SRM-202ENST00000459997 APLP2Q06481 763 aa32.88■■■□□ 2.85
SRM-202ENST00000459997 SETD1BQ9UPS6 1966 aaKnown RBP32.88■■■□□ 2.85
SRM-202ENST00000459997 GGT6Q6P531 493 aa32.87■■■□□ 2.85
SRM-202ENST00000459997 MYOM3Q5VTT5 1437 aa32.86■■■□□ 2.85
SRM-202ENST00000459997 DHX29Q7Z478 1369 aaKnown RBP32.85■■■□□ 2.85
SRM-202ENST00000459997 ZMYM3Q14202 1370 aa32.83■■■□□ 2.85
SRM-202ENST00000459997 MIA2Q96PC5 1412 aa32.83■■■□□ 2.85
SRM-202ENST00000459997 TSPY4P0CV99 314 aa32.81■■■□□ 2.84
SRM-202ENST00000459997 TSPY10P0CW01 314 aa32.81■■■□□ 2.84
SRM-202ENST00000459997 NPATQ14207 1427 aa32.78■■■□□ 2.84
SRM-202ENST00000459997 PPP6R1Q9UPN7 881 aa32.77■■■□□ 2.84
SRM-202ENST00000459997 MAST1Q9Y2H9 1570 aa32.75■■■□□ 2.83
SRM-202ENST00000459997 KIF3BO15066 747 aa32.74■■■□□ 2.83
SRM-202ENST00000459997 STRCQ7RTU9 1775 aa32.73■■■□□ 2.83
SRM-202ENST00000459997 PTPRKQ15262 1439 aa32.68■■■□□ 2.82
SRM-202ENST00000459997 PTPN23Q9H3S7 1636 aa32.68■■■□□ 2.82
SRM-202ENST00000459997 KDM5DQ9BY66 1539 aa32.66■■■□□ 2.82
SRM-202ENST00000459997 MYO3AQ8NEV4 1616 aa32.66■■■□□ 2.82
SRM-202ENST00000459997 FAM135AQ9P2D6 1515 aa32.65■■■□□ 2.82
SRM-202ENST00000459997 DMRT2Q9Y5R5 561 aa32.63■■■□□ 2.81
SRM-202ENST00000459997 CROCC2H7BZ55 1655 aa32.62■■■□□ 2.81
SRM-202ENST00000459997 FGD6Q6ZV73 1430 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms