RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 LMTK3Q96Q04 1460 aa16.37■□□□□ 0.21
SYN3-205ENST00000459990 FER1L4A9Z1Z3 1794 aa16.37■□□□□ 0.21
SYN3-205ENST00000459990 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
SYN3-205ENST00000459990 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
SYN3-205ENST00000459990 SCAPERQ9BY12 1400 aa16.33■□□□□ 0.2
SYN3-205ENST00000459990 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.2
SYN3-205ENST00000459990 KDM5CP41229 1560 aa16.32■□□□□ 0.2
SYN3-205ENST00000459990 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
SYN3-205ENST00000459990 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
SYN3-205ENST00000459990 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
SYN3-205ENST00000459990 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
SYN3-205ENST00000459990 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
SYN3-205ENST00000459990 CDC42BPAQ5VT25 1732 aa16.28■□□□□ 0.2
SYN3-205ENST00000459990 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
SYN3-205ENST00000459990 ABCA6Q8N139 1617 aa16.28■□□□□ 0.2
SYN3-205ENST00000459990 DIP2CQ9Y2E4 1556 aa16.28■□□□□ 0.2
SYN3-205ENST00000459990 ATP1B4Q9UN42 357 aaPredicted RBP16.27■□□□□ 0.2
SYN3-205ENST00000459990 ABCC1P33527 1531 aa16.26■□□□□ 0.19
SYN3-205ENST00000459990 C9orf84Q5VXU9 1444 aa16.26■□□□□ 0.19
SYN3-205ENST00000459990 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
SYN3-205ENST00000459990 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
SYN3-205ENST00000459990 ATP10AO60312 1499 aa16.24■□□□□ 0.19
SYN3-205ENST00000459990 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
SYN3-205ENST00000459990 CLIP1P30622 1438 aa16.23■□□□□ 0.19
SYN3-205ENST00000459990 REREQ9P2R6 1566 aa16.22■□□□□ 0.19
SYN3-205ENST00000459990 PREX1Q8TCU6 1659 aa16.22■□□□□ 0.19
SYN3-205ENST00000459990 FYCO1Q9BQS8 1478 aa16.21■□□□□ 0.19
SYN3-205ENST00000459990 KIDINS220Q9ULH0 1771 aa16.21■□□□□ 0.18
SYN3-205ENST00000459990 MLECQ14165 292 aa16.2■□□□□ 0.18
SYN3-205ENST00000459990 EFCAB2Q5VUJ9 269 aa16.2■□□□□ 0.18
SYN3-205ENST00000459990 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
SYN3-205ENST00000459990 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
SYN3-205ENST00000459990 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
SYN3-205ENST00000459990 HSPA2P54652 639 aa16.18■□□□□ 0.18
SYN3-205ENST00000459990 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
SYN3-205ENST00000459990 AFAP1Q8N556 730 aa16.18■□□□□ 0.18
SYN3-205ENST00000459990 C3P01024 1663 aa16.18■□□□□ 0.18
SYN3-205ENST00000459990 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
SYN3-205ENST00000459990 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
SYN3-205ENST00000459990 SYCP2Q9BX26 1530 aa16.14■□□□□ 0.18
SYN3-205ENST00000459990 AGLP35573 1532 aa16.13■□□□□ 0.17
SYN3-205ENST00000459990 FBXO41Q8TF61 875 aa16.11■□□□□ 0.17
SYN3-205ENST00000459990 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
SYN3-205ENST00000459990 GPATCH8Q9UKJ3 1502 aaKnown RBP16.1■□□□□ 0.17
SYN3-205ENST00000459990 CEBPAP49715 358 aaPredicted RBP16.1■□□□□ 0.17
SYN3-205ENST00000459990 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.16
SYN3-205ENST00000459990 PLXNC1O60486 1568 aa16.07■□□□□ 0.16
SYN3-205ENST00000459990 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
SYN3-205ENST00000459990 MROH2AA6NES4 1674 aa16.06■□□□□ 0.16
SYN3-205ENST00000459990 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
SYN3-205ENST00000459990 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
SYN3-205ENST00000459990 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.16
SYN3-205ENST00000459990 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
SYN3-205ENST00000459990 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
SYN3-205ENST00000459990 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.15
SYN3-205ENST00000459990 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
SYN3-205ENST00000459990 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
SYN3-205ENST00000459990 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
SYN3-205ENST00000459990 MYO3AQ8NEV4 1616 aa15.98■□□□□ 0.15
SYN3-205ENST00000459990 ZNF142P52746 1687 aaPredicted RBP15.98■□□□□ 0.15
SYN3-205ENST00000459990 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
SYN3-205ENST00000459990 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
SYN3-205ENST00000459990 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
SYN3-205ENST00000459990 CNTLNQ9NXG0 1405 aa15.96■□□□□ 0.15
SYN3-205ENST00000459990 MTUS2Q5JR59 1369 aa15.96■□□□□ 0.15
SYN3-205ENST00000459990 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
SYN3-205ENST00000459990 A2MP01023 1474 aa15.96■□□□□ 0.14
SYN3-205ENST00000459990 MBD5Q9P267 1494 aa15.96■□□□□ 0.14
SYN3-205ENST00000459990 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
SYN3-205ENST00000459990 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
SYN3-205ENST00000459990 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
SYN3-205ENST00000459990 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
SYN3-205ENST00000459990 CFDP1Q9UEE9 299 aaPredicted RBP15.93■□□□□ 0.14
SYN3-205ENST00000459990 CAMSAP1Q5T5Y3 1602 aa15.93■□□□□ 0.14
SYN3-205ENST00000459990 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
SYN3-205ENST00000459990 NPATQ14207 1427 aa15.92■□□□□ 0.14
SYN3-205ENST00000459990 PTPRTO14522 1441 aa15.9■□□□□ 0.14
SYN3-205ENST00000459990 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
SYN3-205ENST00000459990 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
SYN3-205ENST00000459990 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
SYN3-205ENST00000459990 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
SYN3-205ENST00000459990 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
SYN3-205ENST00000459990 ESF1Q9H501 851 aaKnown RBP15.87■□□□□ 0.13
SYN3-205ENST00000459990 CCDC141Q6ZP82 1450 aa15.86■□□□□ 0.13
SYN3-205ENST00000459990 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
SYN3-205ENST00000459990 ARHGEF5Q12774 1597 aa15.84■□□□□ 0.13
SYN3-205ENST00000459990 TCOF1Q13428 1488 aaKnown RBP15.83■□□□□ 0.12
SYN3-205ENST00000459990 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.12
SYN3-205ENST00000459990 DMRT2Q9Y5R5 561 aa15.82■□□□□ 0.12
SYN3-205ENST00000459990 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
SYN3-205ENST00000459990 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
SYN3-205ENST00000459990 GGT6Q6P531 493 aa15.81■□□□□ 0.12
SYN3-205ENST00000459990 VPS8Q8N3P4 1428 aa15.81■□□□□ 0.12
SYN3-205ENST00000459990 KDM5DQ9BY66 1539 aa15.81■□□□□ 0.12
SYN3-205ENST00000459990 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
SYN3-205ENST00000459990 NEURL4Q96JN8 1562 aa15.79■□□□□ 0.12
SYN3-205ENST00000459990 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
SYN3-205ENST00000459990 RNF17Q9BXT8 1623 aaKnown RBP15.79■□□□□ 0.12
SYN3-205ENST00000459990 MAST1Q9Y2H9 1570 aa15.79■□□□□ 0.12
SYN3-205ENST00000459990 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms