RNA–Protein interactions for RNA: ENST00000459689.1

SUPT3H-204, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 396 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-204ENST00000459689 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
SUPT3H-204ENST00000459689 SNPHO15079 494 aa12.97□□□□□ -0.33
SUPT3H-204ENST00000459689 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
SUPT3H-204ENST00000459689 NCKAP5LQ9HCH0 1330 aa12.94□□□□□ -0.34
SUPT3H-204ENST00000459689 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
SUPT3H-204ENST00000459689 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
SUPT3H-204ENST00000459689 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
SUPT3H-204ENST00000459689 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
SUPT3H-204ENST00000459689 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
SUPT3H-204ENST00000459689 FOXK1P85037 733 aa12.9□□□□□ -0.34
SUPT3H-204ENST00000459689 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
SUPT3H-204ENST00000459689 POTEMA6NI47 508 aa12.88□□□□□ -0.35
SUPT3H-204ENST00000459689 DSG2Q14126 1118 aa12.88□□□□□ -0.35
SUPT3H-204ENST00000459689 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
SUPT3H-204ENST00000459689 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
SUPT3H-204ENST00000459689 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
SUPT3H-204ENST00000459689 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
SUPT3H-204ENST00000459689 SLC34A2O95436 690 aa12.83□□□□□ -0.36
SUPT3H-204ENST00000459689 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
SUPT3H-204ENST00000459689 MFSD10Q14728 455 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 PDE4AP27815 886 aa12.79□□□□□ -0.36
SUPT3H-204ENST00000459689 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
SUPT3H-204ENST00000459689 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
SUPT3H-204ENST00000459689 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
SUPT3H-204ENST00000459689 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
SUPT3H-204ENST00000459689 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.378e-7■■■□□ 18.1
SUPT3H-204ENST00000459689 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
SUPT3H-204ENST00000459689 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
SUPT3H-204ENST00000459689 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
SUPT3H-204ENST00000459689 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
SUPT3H-204ENST00000459689 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
SUPT3H-204ENST00000459689 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
SUPT3H-204ENST00000459689 EMP3P54852 163 aa12.73□□□□□ -0.37
SUPT3H-204ENST00000459689 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
SUPT3H-204ENST00000459689 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
SUPT3H-204ENST00000459689 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
SUPT3H-204ENST00000459689 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
SUPT3H-204ENST00000459689 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
SUPT3H-204ENST00000459689 NUDT7P0C024 238 aa12.67□□□□□ -0.38
SUPT3H-204ENST00000459689 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
SUPT3H-204ENST00000459689 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
SUPT3H-204ENST00000459689 CAMK2BQ13554 666 aa12.66□□□□□ -0.38
SUPT3H-204ENST00000459689 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
SUPT3H-204ENST00000459689 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
SUPT3H-204ENST00000459689 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
SUPT3H-204ENST00000459689 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
SUPT3H-204ENST00000459689 ERBB3P21860 1342 aa12.6□□□□□ -0.39
SUPT3H-204ENST00000459689 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
SUPT3H-204ENST00000459689 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
SUPT3H-204ENST00000459689 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
SUPT3H-204ENST00000459689 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
SUPT3H-204ENST00000459689 TBC1D12O60347 775 aa12.54□□□□□ -0.4
SUPT3H-204ENST00000459689 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
SUPT3H-204ENST00000459689 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
SUPT3H-204ENST00000459689 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
SUPT3H-204ENST00000459689 DPYSL4O14531 572 aa12.49□□□□□ -0.41
SUPT3H-204ENST00000459689 EVI5O60447 810 aa12.49□□□□□ -0.41
SUPT3H-204ENST00000459689 E2F4Q16254 413 aa12.49□□□□□ -0.41
SUPT3H-204ENST00000459689 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
SUPT3H-204ENST00000459689 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
SUPT3H-204ENST00000459689 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
SUPT3H-204ENST00000459689 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
SUPT3H-204ENST00000459689 FOSBP53539 338 aa12.43□□□□□ -0.42
SUPT3H-204ENST00000459689 PDIA6Q15084 440 aa12.43□□□□□ -0.42
SUPT3H-204ENST00000459689 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
SUPT3H-204ENST00000459689 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
SUPT3H-204ENST00000459689 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
SUPT3H-204ENST00000459689 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
SUPT3H-204ENST00000459689 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
SUPT3H-204ENST00000459689 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
SUPT3H-204ENST00000459689 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
SUPT3H-204ENST00000459689 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
SUPT3H-204ENST00000459689 PBX2P40425 430 aa12.36□□□□□ -0.43
SUPT3H-204ENST00000459689 PTGER2P43116 358 aa12.36□□□□□ -0.43
SUPT3H-204ENST00000459689 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
SUPT3H-204ENST00000459689 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
SUPT3H-204ENST00000459689 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
SUPT3H-204ENST00000459689 PHF14O94880 888 aa12.32□□□□□ -0.44
SUPT3H-204ENST00000459689 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.449e-7■■■□□ 16.4
SUPT3H-204ENST00000459689 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
SUPT3H-204ENST00000459689 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
SUPT3H-204ENST00000459689 PSEN2P49810 448 aa12.31□□□□□ -0.44
SUPT3H-204ENST00000459689 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
SUPT3H-204ENST00000459689 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
SUPT3H-204ENST00000459689 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
SUPT3H-204ENST00000459689 DDX12PQ92771 950 aa12.29□□□□□ -0.44
SUPT3H-204ENST00000459689 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
SUPT3H-204ENST00000459689 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
SUPT3H-204ENST00000459689 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
SUPT3H-204ENST00000459689 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
SUPT3H-204ENST00000459689 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
SUPT3H-204ENST00000459689 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
SUPT3H-204ENST00000459689 FBXW7Q969H0 707 aa12.24□□□□□ -0.45
SUPT3H-204ENST00000459689 EPAS1Q99814 870 aa12.24□□□□□ -0.45
SUPT3H-204ENST00000459689 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
SUPT3H-204ENST00000459689 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
SUPT3H-204ENST00000459689 PTPREP23469 700 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms