RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 DIP2BQ9P265 1576 aa16.07■□□□□ 0.16
NEDD9-205ENST00000459670 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
NEDD9-205ENST00000459670 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
NEDD9-205ENST00000459670 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
NEDD9-205ENST00000459670 GCC2Q8IWJ2 1684 aa16.05■□□□□ 0.16
NEDD9-205ENST00000459670 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
NEDD9-205ENST00000459670 ADGBQ8N7X0 1667 aa16.04■□□□□ 0.16
NEDD9-205ENST00000459670 PPRC1Q5VV67 1664 aaKnown RBP16.03■□□□□ 0.16
NEDD9-205ENST00000459670 ABCC1P33527 1531 aa16.03■□□□□ 0.16
NEDD9-205ENST00000459670 PLCH2O75038 1416 aa16.02■□□□□ 0.15
NEDD9-205ENST00000459670 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
NEDD9-205ENST00000459670 AKNAQ7Z591 1439 aa16■□□□□ 0.15
NEDD9-205ENST00000459670 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
NEDD9-205ENST00000459670 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
NEDD9-205ENST00000459670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
NEDD9-205ENST00000459670 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
NEDD9-205ENST00000459670 DAPK1P53355 1430 aa15.98■□□□□ 0.15
NEDD9-205ENST00000459670 CFAP74Q9C0B2 1584 aa15.98■□□□□ 0.15
NEDD9-205ENST00000459670 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
NEDD9-205ENST00000459670 ABCC5O15440 1437 aa15.97■□□□□ 0.15
NEDD9-205ENST00000459670 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
NEDD9-205ENST00000459670 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
NEDD9-205ENST00000459670 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
NEDD9-205ENST00000459670 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
NEDD9-205ENST00000459670 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
NEDD9-205ENST00000459670 PLEKHH2Q8IVE3 1493 aa15.93■□□□□ 0.14
NEDD9-205ENST00000459670 HFM1A2PYH4 1435 aa15.93■□□□□ 0.14
NEDD9-205ENST00000459670 ZNF644Q9H582 1327 aaPredicted RBP15.93■□□□□ 0.14
NEDD9-205ENST00000459670 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
NEDD9-205ENST00000459670 INO80Q9ULG1 1556 aaPredicted RBP15.92■□□□□ 0.14
NEDD9-205ENST00000459670 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
NEDD9-205ENST00000459670 KDM6BO15054 1643 aa15.9■□□□□ 0.14
NEDD9-205ENST00000459670 KDM5CP41229 1560 aa15.9■□□□□ 0.14
NEDD9-205ENST00000459670 FANCAO15360 1455 aa15.9■□□□□ 0.14
NEDD9-205ENST00000459670 ROCK1Q13464 1354 aa15.89■□□□□ 0.13
NEDD9-205ENST00000459670 RICTORQ6R327 1708 aa15.89■□□□□ 0.13
NEDD9-205ENST00000459670 NAIPQ13075 1403 aa15.89■□□□□ 0.13
NEDD9-205ENST00000459670 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
NEDD9-205ENST00000459670 ZFYVE16Q7Z3T8 1539 aa15.88■□□□□ 0.13
NEDD9-205ENST00000459670 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
NEDD9-205ENST00000459670 NEO1Q92859 1461 aa15.87■□□□□ 0.13
NEDD9-205ENST00000459670 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
NEDD9-205ENST00000459670 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
NEDD9-205ENST00000459670 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
NEDD9-205ENST00000459670 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
NEDD9-205ENST00000459670 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
NEDD9-205ENST00000459670 NCOA1Q15788 1441 aa15.84■□□□□ 0.13
NEDD9-205ENST00000459670 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
NEDD9-205ENST00000459670 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.12
NEDD9-205ENST00000459670 TRAPPC8Q9Y2L5 1435 aa15.83■□□□□ 0.12
NEDD9-205ENST00000459670 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
NEDD9-205ENST00000459670 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
NEDD9-205ENST00000459670 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
NEDD9-205ENST00000459670 ZMYM4Q5VZL5 1548 aa15.8■□□□□ 0.12
NEDD9-205ENST00000459670 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
NEDD9-205ENST00000459670 EFCAB2Q5VUJ9 269 aa15.79■□□□□ 0.12
NEDD9-205ENST00000459670 BCORL1Q5H9F3 1711 aa15.79■□□□□ 0.12
NEDD9-205ENST00000459670 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
NEDD9-205ENST00000459670 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
NEDD9-205ENST00000459670 RTEL1-TNFRSF6BF6WH68 1400 aa15.78■□□□□ 0.12
NEDD9-205ENST00000459670 UNC13BO14795 1591 aa15.78■□□□□ 0.12
NEDD9-205ENST00000459670 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.11
NEDD9-205ENST00000459670 ZNF518AQ6AHZ1 1483 aa15.77■□□□□ 0.11
NEDD9-205ENST00000459670 DEPDC5O75140 1603 aa15.76■□□□□ 0.11
NEDD9-205ENST00000459670 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
NEDD9-205ENST00000459670 HRCP23327 699 aa15.76■□□□□ 0.11
NEDD9-205ENST00000459670 DENND4BO75064 1496 aaPredicted RBP15.76■□□□□ 0.11
NEDD9-205ENST00000459670 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
NEDD9-205ENST00000459670 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
NEDD9-205ENST00000459670 EIF2AK4Q9P2K8 1649 aaKnown RBP15.75■□□□□ 0.11
NEDD9-205ENST00000459670 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
NEDD9-205ENST00000459670 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
NEDD9-205ENST00000459670 MLH3Q9UHC1 1453 aa15.74■□□□□ 0.11
NEDD9-205ENST00000459670 HNRNPMP52272 730 aaKnown RBP eCLIP15.74■□□□□ 0.11
NEDD9-205ENST00000459670 RSPH4AQ5TD94 716 aa15.74■□□□□ 0.11
NEDD9-205ENST00000459670 DUOX2Q9NRD8 1548 aa15.73■□□□□ 0.11
NEDD9-205ENST00000459670 ITGAEP38570 1179 aa15.73■□□□□ 0.11
NEDD9-205ENST00000459670 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
NEDD9-205ENST00000459670 DIP2CQ9Y2E4 1556 aa15.72■□□□□ 0.11
NEDD9-205ENST00000459670 MROH1Q8NDA8 1641 aa15.72■□□□□ 0.11
NEDD9-205ENST00000459670 ANKRD30AQ9BXX3 1397 aa15.71■□□□□ 0.11
NEDD9-205ENST00000459670 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
NEDD9-205ENST00000459670 KIF15Q9NS87 1388 aa15.7■□□□□ 0.1
NEDD9-205ENST00000459670 ERBINQ96RT1 1412 aa15.69■□□□□ 0.1
NEDD9-205ENST00000459670 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
NEDD9-205ENST00000459670 REREQ9P2R6 1566 aa15.69■□□□□ 0.1
NEDD9-205ENST00000459670 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
NEDD9-205ENST00000459670 VWDEQ8N2E2 1590 aa15.68■□□□□ 0.1
NEDD9-205ENST00000459670 PZPP20742 1482 aa15.68■□□□□ 0.1
NEDD9-205ENST00000459670 COL17A1Q9UMD9 1497 aaPredicted RBP15.68■□□□□ 0.1
NEDD9-205ENST00000459670 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
NEDD9-205ENST00000459670 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
NEDD9-205ENST00000459670 SIGLEC1Q9BZZ2 1709 aa15.67■□□□□ 0.1
NEDD9-205ENST00000459670 PRDM15P57071 1507 aaPredicted RBP15.66■□□□□ 0.1
NEDD9-205ENST00000459670 ARHGEF40Q8TER5 1519 aa15.65■□□□□ 0.1
NEDD9-205ENST00000459670 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
NEDD9-205ENST00000459670 AFAP1Q8N556 730 aa15.63■□□□□ 0.09
NEDD9-205ENST00000459670 CLSPNQ9HAW4 1339 aa15.61■□□□□ 0.09
NEDD9-205ENST00000459670 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
NEDD9-205ENST00000459670 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms