RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 ARHGAP5Q13017 1502 aa26.13■■□□□ 1.77
TRIM39-211ENST00000458516 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
TRIM39-211ENST00000458516 CFAP74Q9C0B2 1584 aa26.12■■□□□ 1.77
TRIM39-211ENST00000458516 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
TRIM39-211ENST00000458516 FANCAO15360 1455 aa26.09■■□□□ 1.77
TRIM39-211ENST00000458516 NEO1Q92859 1461 aa26.06■■□□□ 1.76
TRIM39-211ENST00000458516 SAMD9LQ8IVG5 1584 aa26.06■■□□□ 1.76
TRIM39-211ENST00000458516 CFDP1Q9UEE9 299 aaPredicted RBP26.03■■□□□ 1.76
TRIM39-211ENST00000458516 MIA2Q96PC5 1412 aa26.03■■□□□ 1.76
TRIM39-211ENST00000458516 FGD6Q6ZV73 1430 aa26.02■■□□□ 1.76
TRIM39-211ENST00000458516 ABCC1P33527 1531 aa26.01■■□□□ 1.75
TRIM39-211ENST00000458516 EFCAB2Q5VUJ9 269 aa26.01■■□□□ 1.75
TRIM39-211ENST00000458516 PTPN23Q9H3S7 1636 aa26.01■■□□□ 1.75
TRIM39-211ENST00000458516 AKNAQ7Z591 1439 aa26■■□□□ 1.75
TRIM39-211ENST00000458516 CAMSAP2Q08AD1 1489 aa25.99■■□□□ 1.75
TRIM39-211ENST00000458516 ADGRL1O94910 1474 aa25.97■■□□□ 1.75
TRIM39-211ENST00000458516 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
TRIM39-211ENST00000458516 SYCP2Q9BX26 1530 aa25.95■■□□□ 1.74
TRIM39-211ENST00000458516 ZNF777Q9ULD5 760 aaPredicted RBP25.95■■□□□ 1.74
TRIM39-211ENST00000458516 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
TRIM39-211ENST00000458516 ARHGEF12Q9NZN5 1544 aa25.93■■□□□ 1.74
TRIM39-211ENST00000458516 PLEKHH2Q8IVE3 1493 aa25.93■■□□□ 1.74
TRIM39-211ENST00000458516 RRBP1Q9P2E9 1410 aaKnown RBP25.92■■□□□ 1.74
TRIM39-211ENST00000458516 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
TRIM39-211ENST00000458516 KIAA1107Q9UPP5 1409 aa25.91■■□□□ 1.74
TRIM39-211ENST00000458516 SCAPERQ9BY12 1400 aa25.9■■□□□ 1.74
TRIM39-211ENST00000458516 KDM6BO15054 1643 aa25.9■■□□□ 1.74
TRIM39-211ENST00000458516 COL17A1Q9UMD9 1497 aaPredicted RBP25.9■■□□□ 1.74
TRIM39-211ENST00000458516 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
TRIM39-211ENST00000458516 ARHGEF5Q12774 1597 aa25.87■■□□□ 1.73
TRIM39-211ENST00000458516 DENND4BO75064 1496 aaPredicted RBP25.87■■□□□ 1.73
TRIM39-211ENST00000458516 MBD5Q9P267 1494 aa25.87■■□□□ 1.73
TRIM39-211ENST00000458516 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
TRIM39-211ENST00000458516 TRAPPC8Q9Y2L5 1435 aa25.85■■□□□ 1.73
TRIM39-211ENST00000458516 DNMT1P26358 1616 aaKnown RBP25.85■■□□□ 1.73
TRIM39-211ENST00000458516 CROCC2H7BZ55 1655 aa25.84■■□□□ 1.73
TRIM39-211ENST00000458516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.72
TRIM39-211ENST00000458516 KDM5CP41229 1560 aa25.82■■□□□ 1.72
TRIM39-211ENST00000458516 HNRNPMP52272 730 aaKnown RBP eCLIP25.82■■□□□ 1.72
TRIM39-211ENST00000458516 ZNF518AQ6AHZ1 1483 aa25.82■■□□□ 1.72
TRIM39-211ENST00000458516 CCDC141Q6ZP82 1450 aa25.81■■□□□ 1.72
TRIM39-211ENST00000458516 FAM50AQ14320 339 aaKnown RBP25.8■■□□□ 1.72
TRIM39-211ENST00000458516 ZMYM4Q5VZL5 1548 aa25.79■■□□□ 1.72
TRIM39-211ENST00000458516 RAPGEF3O95398 923 aa25.78■■□□□ 1.72
TRIM39-211ENST00000458516 DAPK1P53355 1430 aa25.77■■□□□ 1.72
TRIM39-211ENST00000458516 HECW2Q9P2P5 1572 aa25.75■■□□□ 1.71
TRIM39-211ENST00000458516 ABCC5O15440 1437 aa25.75■■□□□ 1.71
TRIM39-211ENST00000458516 AFAP1Q8N556 730 aa25.75■■□□□ 1.71
TRIM39-211ENST00000458516 INO80Q9ULG1 1556 aaPredicted RBP25.74■■□□□ 1.71
TRIM39-211ENST00000458516 MAST1Q9Y2H9 1570 aa25.73■■□□□ 1.71
TRIM39-211ENST00000458516 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
TRIM39-211ENST00000458516 KIDINS220Q9ULH0 1771 aa25.73■■□□□ 1.71
TRIM39-211ENST00000458516 SHANK2Q9UPX8 1470 aa25.72■■□□□ 1.71
TRIM39-211ENST00000458516 ZFYVE16Q7Z3T8 1539 aa25.72■■□□□ 1.71
TRIM39-211ENST00000458516 ATP7AQ04656 1500 aa25.7■■□□□ 1.7
TRIM39-211ENST00000458516 MLH3Q9UHC1 1453 aa25.7■■□□□ 1.7
TRIM39-211ENST00000458516 ADGBQ8N7X0 1667 aa25.69■■□□□ 1.7
TRIM39-211ENST00000458516 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
TRIM39-211ENST00000458516 C9orf84Q5VXU9 1444 aa25.67■■□□□ 1.7
TRIM39-211ENST00000458516 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
TRIM39-211ENST00000458516 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
TRIM39-211ENST00000458516 ARHGEF40Q8TER5 1519 aa25.66■■□□□ 1.7
TRIM39-211ENST00000458516 SPAG9O60271 1321 aaKnown RBP25.65■■□□□ 1.7
TRIM39-211ENST00000458516 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
TRIM39-211ENST00000458516 PLXNC1O60486 1568 aa25.65■■□□□ 1.7
TRIM39-211ENST00000458516 DIP2CQ9Y2E4 1556 aa25.64■■□□□ 1.69
TRIM39-211ENST00000458516 TSPY4P0CV99 314 aa25.63■■□□□ 1.69
TRIM39-211ENST00000458516 TSPY10P0CW01 314 aa25.63■■□□□ 1.69
TRIM39-211ENST00000458516 YEATS2Q9ULM3 1422 aa25.63■■□□□ 1.69
TRIM39-211ENST00000458516 ADGRL2O95490 1459 aa25.62■■□□□ 1.69
TRIM39-211ENST00000458516 ITGAEP38570 1179 aa25.6■■□□□ 1.69
TRIM39-211ENST00000458516 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
TRIM39-211ENST00000458516 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
TRIM39-211ENST00000458516 ROCK1Q13464 1354 aa25.55■■□□□ 1.68
TRIM39-211ENST00000458516 NCOA1Q15788 1441 aa25.54■■□□□ 1.68
TRIM39-211ENST00000458516 ANKRD30AQ9BXX3 1397 aa25.54■■□□□ 1.68
TRIM39-211ENST00000458516 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
TRIM39-211ENST00000458516 SIGLEC1Q9BZZ2 1709 aa25.53■■□□□ 1.68
TRIM39-211ENST00000458516 ATP10AO60312 1499 aa25.53■■□□□ 1.68
TRIM39-211ENST00000458516 GCC2Q8IWJ2 1684 aa25.52■■□□□ 1.68
TRIM39-211ENST00000458516 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
TRIM39-211ENST00000458516 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
TRIM39-211ENST00000458516 DUOX2Q9NRD8 1548 aa25.49■■□□□ 1.67
TRIM39-211ENST00000458516 A2MP01023 1474 aa25.49■■□□□ 1.67
TRIM39-211ENST00000458516 RRP7BPQ9NSQ0 103 aa25.46■■□□□ 1.67
TRIM39-211ENST00000458516 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
TRIM39-211ENST00000458516 BCORL1Q5H9F3 1711 aa25.44■■□□□ 1.66
TRIM39-211ENST00000458516 HFM1A2PYH4 1435 aa25.44■■□□□ 1.66
TRIM39-211ENST00000458516 EIF2AK4Q9P2K8 1649 aaKnown RBP25.44■■□□□ 1.66
TRIM39-211ENST00000458516 AGLP35573 1532 aa25.42■■□□□ 1.66
TRIM39-211ENST00000458516 NAIPQ13075 1403 aa25.42■■□□□ 1.66
TRIM39-211ENST00000458516 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
TRIM39-211ENST00000458516 ANKRD50Q9ULJ7 1429 aa25.38■■□□□ 1.65
TRIM39-211ENST00000458516 RNF17Q9BXT8 1623 aaKnown RBP25.36■■□□□ 1.65
TRIM39-211ENST00000458516 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
TRIM39-211ENST00000458516 MROH1Q8NDA8 1641 aa25.32■■□□□ 1.64
TRIM39-211ENST00000458516 SETD5Q9C0A6 1442 aa25.3■■□□□ 1.64
TRIM39-211ENST00000458516 UNC13BO14795 1591 aa25.3■■□□□ 1.64
TRIM39-211ENST00000458516 KIF3BO15066 747 aa25.29■■□□□ 1.64
TRIM39-211ENST00000458516 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms