RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 ILDR1Q86SU0 546 aaPredicted RBP15.91■□□□□ 0.14
PCCA-208ENST00000458283 NEO1Q92859 1461 aa15.91■□□□□ 0.14
PCCA-208ENST00000458283 SUPT6HQ7KZ85 1726 aaKnown RBP15.9■□□□□ 0.14
PCCA-208ENST00000458283 KIF14Q15058 1648 aa15.9■□□□□ 0.14
PCCA-208ENST00000458283 TROQ12816 1431 aaPredicted RBP15.89■□□□□ 0.13
PCCA-208ENST00000458283 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
PCCA-208ENST00000458283 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
PCCA-208ENST00000458283 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
PCCA-208ENST00000458283 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
PCCA-208ENST00000458283 CFAP74Q9C0B2 1584 aa15.86■□□□□ 0.13
PCCA-208ENST00000458283 ADAMTSL3P82987 1691 aa15.86■□□□□ 0.13
PCCA-208ENST00000458283 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
PCCA-208ENST00000458283 ARHGEF40Q8TER5 1519 aa15.84■□□□□ 0.13
PCCA-208ENST00000458283 BCORL1Q5H9F3 1711 aa15.83■□□□□ 0.13
PCCA-208ENST00000458283 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
PCCA-208ENST00000458283 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
PCCA-208ENST00000458283 PTPRMP28827 1452 aa15.82■□□□□ 0.12
PCCA-208ENST00000458283 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
PCCA-208ENST00000458283 MADDQ8WXG6 1647 aa15.82■□□□□ 0.12
PCCA-208ENST00000458283 FANCAO15360 1455 aa15.8■□□□□ 0.12
PCCA-208ENST00000458283 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCCA-208ENST00000458283 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
PCCA-208ENST00000458283 RIMS1Q86UR5 1692 aaKnown RBP15.78■□□□□ 0.12
PCCA-208ENST00000458283 AKNAQ7Z591 1439 aa15.77■□□□□ 0.12
PCCA-208ENST00000458283 CCNB3Q8WWL7 1395 aa15.77■□□□□ 0.12
PCCA-208ENST00000458283 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
PCCA-208ENST00000458283 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
PCCA-208ENST00000458283 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
PCCA-208ENST00000458283 ZMYM4Q5VZL5 1548 aa15.74■□□□□ 0.11
PCCA-208ENST00000458283 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
PCCA-208ENST00000458283 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
PCCA-208ENST00000458283 PREX2Q70Z35 1606 aa15.73■□□□□ 0.11
PCCA-208ENST00000458283 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
PCCA-208ENST00000458283 POGZQ7Z3K3 1410 aa15.72■□□□□ 0.11
PCCA-208ENST00000458283 ARHGAP5Q13017 1502 aa15.71■□□□□ 0.11
PCCA-208ENST00000458283 GPATCH8Q9UKJ3 1502 aaKnown RBP15.7■□□□□ 0.1
PCCA-208ENST00000458283 PTPN23Q9H3S7 1636 aa15.7■□□□□ 0.1
PCCA-208ENST00000458283 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
PCCA-208ENST00000458283 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
PCCA-208ENST00000458283 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
PCCA-208ENST00000458283 SIGLEC1Q9BZZ2 1709 aa15.68■□□□□ 0.1
PCCA-208ENST00000458283 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
PCCA-208ENST00000458283 LMTK3Q96Q04 1460 aa15.68■□□□□ 0.1
PCCA-208ENST00000458283 ZNF777Q9ULD5 760 aaPredicted RBP15.68■□□□□ 0.1
PCCA-208ENST00000458283 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
PCCA-208ENST00000458283 CAMSAP2Q08AD1 1489 aa15.67■□□□□ 0.1
PCCA-208ENST00000458283 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
PCCA-208ENST00000458283 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
PCCA-208ENST00000458283 CFDP1Q9UEE9 299 aaPredicted RBP15.66■□□□□ 0.1
PCCA-208ENST00000458283 PLCH2O75038 1416 aa15.66■□□□□ 0.1
PCCA-208ENST00000458283 SCAPERQ9BY12 1400 aa15.65■□□□□ 0.1
PCCA-208ENST00000458283 ITGAEP38570 1179 aa15.64■□□□□ 0.09
PCCA-208ENST00000458283 SAMD9LQ8IVG5 1584 aa15.64■□□□□ 0.09
PCCA-208ENST00000458283 PCGF6Q9BYE7 350 aa15.64■□□□□ 0.09
PCCA-208ENST00000458283 MIA2Q96PC5 1412 aa15.63■□□□□ 0.09
PCCA-208ENST00000458283 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
PCCA-208ENST00000458283 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
PCCA-208ENST00000458283 MLECQ14165 292 aa15.62■□□□□ 0.09
PCCA-208ENST00000458283 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
PCCA-208ENST00000458283 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
PCCA-208ENST00000458283 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
PCCA-208ENST00000458283 EFCAB2Q5VUJ9 269 aa15.6■□□□□ 0.09
PCCA-208ENST00000458283 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
PCCA-208ENST00000458283 ATP10AO60312 1499 aa15.59■□□□□ 0.09
PCCA-208ENST00000458283 ABCC1P33527 1531 aa15.58■□□□□ 0.09
PCCA-208ENST00000458283 HSPA2P54652 639 aa15.57■□□□□ 0.08
PCCA-208ENST00000458283 ARHGEF12Q9NZN5 1544 aa15.57■□□□□ 0.08
PCCA-208ENST00000458283 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
PCCA-208ENST00000458283 PREX1Q8TCU6 1659 aa15.57■□□□□ 0.08
PCCA-208ENST00000458283 MYT1LQ9UL68 1186 aa15.56■□□□□ 0.08
PCCA-208ENST00000458283 KDM5CP41229 1560 aa15.56■□□□□ 0.08
PCCA-208ENST00000458283 CROCC2H7BZ55 1655 aa15.56■□□□□ 0.08
PCCA-208ENST00000458283 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
PCCA-208ENST00000458283 DAPK1P53355 1430 aa15.54■□□□□ 0.08
PCCA-208ENST00000458283 DIP2CQ9Y2E4 1556 aa15.53■□□□□ 0.08
PCCA-208ENST00000458283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.52■□□□□ 0.08
PCCA-208ENST00000458283 HNRNPMP52272 730 aaKnown RBP eCLIP15.52■□□□□ 0.084e-6■■■□□ 15.5
PCCA-208ENST00000458283 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
PCCA-208ENST00000458283 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
PCCA-208ENST00000458283 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.07
PCCA-208ENST00000458283 ABCA6Q8N139 1617 aa15.51■□□□□ 0.07
PCCA-208ENST00000458283 ARHGEF5Q12774 1597 aa15.51■□□□□ 0.07
PCCA-208ENST00000458283 ABCC5O15440 1437 aa15.51■□□□□ 0.07
PCCA-208ENST00000458283 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
PCCA-208ENST00000458283 AFAP1Q8N556 730 aa15.5■□□□□ 0.07
PCCA-208ENST00000458283 CHIC2Q9UKJ5 165 aa15.5■□□□□ 0.07
PCCA-208ENST00000458283 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
PCCA-208ENST00000458283 ADGBQ8N7X0 1667 aa15.49■□□□□ 0.07
PCCA-208ENST00000458283 TRAPPC8Q9Y2L5 1435 aa15.49■□□□□ 0.07
PCCA-208ENST00000458283 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
PCCA-208ENST00000458283 SETD1BQ9UPS6 1966 aaKnown RBP15.47■□□□□ 0.07
PCCA-208ENST00000458283 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
PCCA-208ENST00000458283 KIAA1107Q9UPP5 1409 aa15.47■□□□□ 0.07
PCCA-208ENST00000458283 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
PCCA-208ENST00000458283 CEBPAP49715 358 aaPredicted RBP15.46■□□□□ 0.07
PCCA-208ENST00000458283 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.06
PCCA-208ENST00000458283 C3P01024 1663 aa15.45■□□□□ 0.06
PCCA-208ENST00000458283 UHRF1BP1Q6BDS2 1440 aa15.45■□□□□ 0.06
PCCA-208ENST00000458283 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
PCCA-208ENST00000458283 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms