RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
CLTCL1-204ENST00000458188 PLCH2O75038 1416 aa13.38□□□□□ -0.27
CLTCL1-204ENST00000458188 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
CLTCL1-204ENST00000458188 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
CLTCL1-204ENST00000458188 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
CLTCL1-204ENST00000458188 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLTCL1-204ENST00000458188 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
CLTCL1-204ENST00000458188 LMTK3Q96Q04 1460 aa13.34□□□□□ -0.27
CLTCL1-204ENST00000458188 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
CLTCL1-204ENST00000458188 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.28
CLTCL1-204ENST00000458188 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
CLTCL1-204ENST00000458188 FANCAO15360 1455 aa13.32□□□□□ -0.28
CLTCL1-204ENST00000458188 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
CLTCL1-204ENST00000458188 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
CLTCL1-204ENST00000458188 ITGAEP38570 1179 aa13.31□□□□□ -0.28
CLTCL1-204ENST00000458188 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
CLTCL1-204ENST00000458188 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
CLTCL1-204ENST00000458188 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
CLTCL1-204ENST00000458188 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
CLTCL1-204ENST00000458188 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
CLTCL1-204ENST00000458188 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
CLTCL1-204ENST00000458188 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
CLTCL1-204ENST00000458188 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
CLTCL1-204ENST00000458188 MYO5CQ9NQX4 1742 aa13.25□□□□□ -0.29
CLTCL1-204ENST00000458188 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
CLTCL1-204ENST00000458188 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 NEO1Q92859 1461 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 SOCS7O14512 581 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
CLTCL1-204ENST00000458188 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
CLTCL1-204ENST00000458188 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-204ENST00000458188 SYCP2Q9BX26 1530 aa13.21□□□□□ -0.29
CLTCL1-204ENST00000458188 TSPY4P0CV99 314 aa13.2□□□□□ -0.3
CLTCL1-204ENST00000458188 TSPY10P0CW01 314 aa13.2□□□□□ -0.3
CLTCL1-204ENST00000458188 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
CLTCL1-204ENST00000458188 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-204ENST00000458188 PTPN23Q9H3S7 1636 aa13.2□□□□□ -0.3
CLTCL1-204ENST00000458188 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
CLTCL1-204ENST00000458188 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-204ENST00000458188 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
CLTCL1-204ENST00000458188 DISP3Q9P2K9 1392 aa13.19□□□□□ -0.3
CLTCL1-204ENST00000458188 ABCC1P33527 1531 aa13.18□□□□□ -0.3
CLTCL1-204ENST00000458188 SPAG9O60271 1321 aaKnown RBP13.18□□□□□ -0.3
CLTCL1-204ENST00000458188 PTPRMP28827 1452 aa13.18□□□□□ -0.3
CLTCL1-204ENST00000458188 ABCC5O15440 1437 aa13.18□□□□□ -0.3
CLTCL1-204ENST00000458188 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
CLTCL1-204ENST00000458188 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
CLTCL1-204ENST00000458188 POGZQ7Z3K3 1410 aa13.17□□□□□ -0.3
CLTCL1-204ENST00000458188 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
CLTCL1-204ENST00000458188 ILDR2Q71H61 639 aa13.16□□□□□ -0.3
CLTCL1-204ENST00000458188 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
CLTCL1-204ENST00000458188 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
CLTCL1-204ENST00000458188 DAPK1P53355 1430 aa13.15□□□□□ -0.3
CLTCL1-204ENST00000458188 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
CLTCL1-204ENST00000458188 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
CLTCL1-204ENST00000458188 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
CLTCL1-204ENST00000458188 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
CLTCL1-204ENST00000458188 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
CLTCL1-204ENST00000458188 ZNF518AQ6AHZ1 1483 aa13.13□□□□□ -0.31
CLTCL1-204ENST00000458188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLTCL1-204ENST00000458188 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
CLTCL1-204ENST00000458188 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
CLTCL1-204ENST00000458188 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
CLTCL1-204ENST00000458188 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
CLTCL1-204ENST00000458188 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
CLTCL1-204ENST00000458188 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
CLTCL1-204ENST00000458188 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
CLTCL1-204ENST00000458188 HSPA2P54652 639 aa13.07□□□□□ -0.32
CLTCL1-204ENST00000458188 MLECQ14165 292 aa13.07□□□□□ -0.32
CLTCL1-204ENST00000458188 RICTORQ6R327 1708 aa13.07□□□□□ -0.32
CLTCL1-204ENST00000458188 KDM5CP41229 1560 aa13.07□□□□□ -0.32
CLTCL1-204ENST00000458188 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
CLTCL1-204ENST00000458188 NCOA1Q15788 1441 aa13.06□□□□□ -0.32
CLTCL1-204ENST00000458188 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
CLTCL1-204ENST00000458188 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
CLTCL1-204ENST00000458188 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
CLTCL1-204ENST00000458188 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
CLTCL1-204ENST00000458188 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
CLTCL1-204ENST00000458188 KIF3BO15066 747 aa13.04□□□□□ -0.32
CLTCL1-204ENST00000458188 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
CLTCL1-204ENST00000458188 ATP10AO60312 1499 aa13.04□□□□□ -0.32
CLTCL1-204ENST00000458188 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
CLTCL1-204ENST00000458188 GGT6Q6P531 493 aa13.03□□□□□ -0.32
CLTCL1-204ENST00000458188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLTCL1-204ENST00000458188 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-204ENST00000458188 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
CLTCL1-204ENST00000458188 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
CLTCL1-204ENST00000458188 MADDQ8WXG6 1647 aa13.02□□□□□ -0.32
CLTCL1-204ENST00000458188 A2MP01023 1474 aa13.02□□□□□ -0.33
CLTCL1-204ENST00000458188 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.33
CLTCL1-204ENST00000458188 ROCK1Q13464 1354 aa13.01□□□□□ -0.33
CLTCL1-204ENST00000458188 INO80Q9ULG1 1556 aaPredicted RBP13.01□□□□□ -0.33
CLTCL1-204ENST00000458188 DIP2CQ9Y2E4 1556 aa13.01□□□□□ -0.33
CLTCL1-204ENST00000458188 ABCA6Q8N139 1617 aa13□□□□□ -0.33
CLTCL1-204ENST00000458188 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
CLTCL1-204ENST00000458188 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
CLTCL1-204ENST00000458188 ADGRL2O95490 1459 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms