RNA–Protein interactions for RNA: ENST00000458168.1

LINC00709-201, long intergenic non-protein coding RNA 709, humanhuman

TSL 2 BASIC

Gene LINC00709, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00709-201ENST00000458168 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
LINC00709-201ENST00000458168 KIF3CO14782 793 aa11.78□□□□□ -0.52
LINC00709-201ENST00000458168 SNPHO15079 494 aa11.77□□□□□ -0.53
LINC00709-201ENST00000458168 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
LINC00709-201ENST00000458168 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
LINC00709-201ENST00000458168 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
LINC00709-201ENST00000458168 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
LINC00709-201ENST00000458168 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
LINC00709-201ENST00000458168 PDE4AP27815 886 aa11.71□□□□□ -0.53
LINC00709-201ENST00000458168 FOXK1P85037 733 aa11.69□□□□□ -0.54
LINC00709-201ENST00000458168 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
LINC00709-201ENST00000458168 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
LINC00709-201ENST00000458168 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
LINC00709-201ENST00000458168 DSG2Q14126 1118 aa11.67□□□□□ -0.54
LINC00709-201ENST00000458168 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
LINC00709-201ENST00000458168 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
LINC00709-201ENST00000458168 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
LINC00709-201ENST00000458168 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
LINC00709-201ENST00000458168 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
LINC00709-201ENST00000458168 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
LINC00709-201ENST00000458168 ST18O60284 1047 aa11.63□□□□□ -0.55
LINC00709-201ENST00000458168 MFSD10Q14728 455 aa11.63□□□□□ -0.55
LINC00709-201ENST00000458168 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
LINC00709-201ENST00000458168 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
LINC00709-201ENST00000458168 SLC34A2O95436 690 aa11.59□□□□□ -0.55
LINC00709-201ENST00000458168 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
LINC00709-201ENST00000458168 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
LINC00709-201ENST00000458168 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
LINC00709-201ENST00000458168 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
LINC00709-201ENST00000458168 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
LINC00709-201ENST00000458168 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
LINC00709-201ENST00000458168 ARSIQ5FYB1 569 aa11.52□□□□□ -0.57
LINC00709-201ENST00000458168 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
LINC00709-201ENST00000458168 MARVELD3Q96A59 401 aa11.5□□□□□ -0.57
LINC00709-201ENST00000458168 TBC1D12O60347 775 aa11.49□□□□□ -0.57
LINC00709-201ENST00000458168 EMP3P54852 163 aa11.49□□□□□ -0.57
LINC00709-201ENST00000458168 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
LINC00709-201ENST00000458168 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00709-201ENST00000458168 CAMK2BQ13554 666 aa11.48□□□□□ -0.57
LINC00709-201ENST00000458168 POTEMA6NI47 508 aa11.47□□□□□ -0.57
LINC00709-201ENST00000458168 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
LINC00709-201ENST00000458168 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00709-201ENST00000458168 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
LINC00709-201ENST00000458168 NUDT7P0C024 238 aa11.45□□□□□ -0.58
LINC00709-201ENST00000458168 E2F4Q16254 413 aa11.45□□□□□ -0.58
LINC00709-201ENST00000458168 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
LINC00709-201ENST00000458168 ERBB3P21860 1342 aa11.41□□□□□ -0.58
LINC00709-201ENST00000458168 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
LINC00709-201ENST00000458168 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
LINC00709-201ENST00000458168 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
LINC00709-201ENST00000458168 DPYSL4O14531 572 aa11.37□□□□□ -0.59
LINC00709-201ENST00000458168 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
LINC00709-201ENST00000458168 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
LINC00709-201ENST00000458168 EVI5O60447 810 aa11.36□□□□□ -0.59
LINC00709-201ENST00000458168 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
LINC00709-201ENST00000458168 LHX6Q9UPM6 363 aa11.36□□□□□ -0.59
LINC00709-201ENST00000458168 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
LINC00709-201ENST00000458168 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
LINC00709-201ENST00000458168 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
LINC00709-201ENST00000458168 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
LINC00709-201ENST00000458168 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
LINC00709-201ENST00000458168 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
LINC00709-201ENST00000458168 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
LINC00709-201ENST00000458168 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
LINC00709-201ENST00000458168 ARHGEF1Q92888 912 aaKnown RBP11.3□□□□□ -0.6
LINC00709-201ENST00000458168 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
LINC00709-201ENST00000458168 PDIA6Q15084 440 aa11.29□□□□□ -0.6
LINC00709-201ENST00000458168 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
LINC00709-201ENST00000458168 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
LINC00709-201ENST00000458168 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
LINC00709-201ENST00000458168 ZNF687Q8N1G0 1237 aa11.26□□□□□ -0.61
LINC00709-201ENST00000458168 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
LINC00709-201ENST00000458168 JPH4Q96JJ6 628 aa11.25□□□□□ -0.61
LINC00709-201ENST00000458168 FOSBP53539 338 aa11.24□□□□□ -0.61
LINC00709-201ENST00000458168 PTGER2P43116 358 aa11.22□□□□□ -0.61
LINC00709-201ENST00000458168 PHF14O94880 888 aa11.2□□□□□ -0.62
LINC00709-201ENST00000458168 DDX12PQ92771 950 aa11.2□□□□□ -0.62
LINC00709-201ENST00000458168 PBX2P40425 430 aa11.19□□□□□ -0.62
LINC00709-201ENST00000458168 ZDHHC16Q969W1 377 aa11.19□□□□□ -0.62
LINC00709-201ENST00000458168 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
LINC00709-201ENST00000458168 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
LINC00709-201ENST00000458168 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
LINC00709-201ENST00000458168 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
LINC00709-201ENST00000458168 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
LINC00709-201ENST00000458168 EPAS1Q99814 870 aa11.17□□□□□ -0.62
LINC00709-201ENST00000458168 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
LINC00709-201ENST00000458168 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
LINC00709-201ENST00000458168 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.62
LINC00709-201ENST00000458168 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
LINC00709-201ENST00000458168 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
LINC00709-201ENST00000458168 NBR1Q14596 966 aa11.14□□□□□ -0.63
LINC00709-201ENST00000458168 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
LINC00709-201ENST00000458168 ADAM33Q9BZ11 813 aa11.14□□□□□ -0.63
LINC00709-201ENST00000458168 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
LINC00709-201ENST00000458168 KCNK17Q96T54 332 aa11.12□□□□□ -0.63
LINC00709-201ENST00000458168 PTPREP23469 700 aa11.11□□□□□ -0.63
LINC00709-201ENST00000458168 SEMA3EO15041 775 aa11.1□□□□□ -0.63
LINC00709-201ENST00000458168 PSEN2P49810 448 aa11.1□□□□□ -0.63
LINC00709-201ENST00000458168 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00709-201ENST00000458168 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms