RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 ZMYM4Q5VZL5 1548 aa24.94■■□□□ 1.58
CROCCP4-201ENST00000457096 ZFYVE16Q7Z3T8 1539 aa24.93■■□□□ 1.58
CROCCP4-201ENST00000457096 MYO5CQ9NQX4 1742 aa24.93■■□□□ 1.58
CROCCP4-201ENST00000457096 POGZQ7Z3K3 1410 aa24.93■■□□□ 1.58
CROCCP4-201ENST00000457096 CASKIN1Q8WXD9 1431 aa24.93■■□□□ 1.58
CROCCP4-201ENST00000457096 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
CROCCP4-201ENST00000457096 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
CROCCP4-201ENST00000457096 CLIP1P30622 1438 aa24.89■■□□□ 1.58
CROCCP4-201ENST00000457096 MLECQ14165 292 aa24.89■■□□□ 1.58
CROCCP4-201ENST00000457096 ARHGAP5Q13017 1502 aa24.89■■□□□ 1.57
CROCCP4-201ENST00000457096 RIMS1Q86UR5 1692 aaKnown RBP24.86■■□□□ 1.57
CROCCP4-201ENST00000457096 AFAP1Q8N556 730 aa24.85■■□□□ 1.57
CROCCP4-201ENST00000457096 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
CROCCP4-201ENST00000457096 MAGI2Q86UL8 1455 aa24.83■■□□□ 1.56
CROCCP4-201ENST00000457096 CDC42BPBQ9Y5S2 1711 aa24.82■■□□□ 1.56
CROCCP4-201ENST00000457096 FYCO1Q9BQS8 1478 aa24.81■■□□□ 1.56
CROCCP4-201ENST00000457096 ILDR1Q86SU0 546 aaPredicted RBP24.8■■□□□ 1.56
CROCCP4-201ENST00000457096 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
CROCCP4-201ENST00000457096 ATP10AO60312 1499 aa24.77■■□□□ 1.56
CROCCP4-201ENST00000457096 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
CROCCP4-201ENST00000457096 PREX2Q70Z35 1606 aa24.76■■□□□ 1.55
CROCCP4-201ENST00000457096 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
CROCCP4-201ENST00000457096 TRAPPC8Q9Y2L5 1435 aa24.76■■□□□ 1.55
CROCCP4-201ENST00000457096 C9orf84Q5VXU9 1444 aa24.74■■□□□ 1.55
CROCCP4-201ENST00000457096 KDM5CP41229 1560 aa24.74■■□□□ 1.55
CROCCP4-201ENST00000457096 LMTK3Q96Q04 1460 aa24.72■■□□□ 1.55
CROCCP4-201ENST00000457096 CDC42BPAQ5VT25 1732 aa24.72■■□□□ 1.55
CROCCP4-201ENST00000457096 ABCC1P33527 1531 aa24.71■■□□□ 1.55
CROCCP4-201ENST00000457096 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
CROCCP4-201ENST00000457096 HSPA2P54652 639 aa24.7■■□□□ 1.54
CROCCP4-201ENST00000457096 FER1L4A9Z1Z3 1794 aa24.7■■□□□ 1.54
CROCCP4-201ENST00000457096 DIP2CQ9Y2E4 1556 aa24.69■■□□□ 1.54
CROCCP4-201ENST00000457096 ABCA6Q8N139 1617 aa24.68■■□□□ 1.54
CROCCP4-201ENST00000457096 ITSN2Q9NZM3 1697 aa24.67■■□□□ 1.54
CROCCP4-201ENST00000457096 CEBPAP49715 358 aaPredicted RBP24.67■■□□□ 1.54
CROCCP4-201ENST00000457096 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
CROCCP4-201ENST00000457096 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
CROCCP4-201ENST00000457096 SAMD9LQ8IVG5 1584 aa24.64■■□□□ 1.54
CROCCP4-201ENST00000457096 HNRNPMP52272 730 aaKnown RBP eCLIP24.63■■□□□ 1.53
CROCCP4-201ENST00000457096 MLH3Q9UHC1 1453 aa24.63■■□□□ 1.53
CROCCP4-201ENST00000457096 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
CROCCP4-201ENST00000457096 SYCP2Q9BX26 1530 aa24.61■■□□□ 1.53
CROCCP4-201ENST00000457096 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
CROCCP4-201ENST00000457096 KIDINS220Q9ULH0 1771 aa24.59■■□□□ 1.53
CROCCP4-201ENST00000457096 CCNB3Q8WWL7 1395 aa24.57■■□□□ 1.52
CROCCP4-201ENST00000457096 CFDP1Q9UEE9 299 aaPredicted RBP24.56■■□□□ 1.52
CROCCP4-201ENST00000457096 ZNF644Q9H582 1327 aaPredicted RBP24.55■■□□□ 1.52
CROCCP4-201ENST00000457096 REREQ9P2R6 1566 aa24.54■■□□□ 1.52
CROCCP4-201ENST00000457096 TIAM1Q13009 1591 aa24.51■■□□□ 1.51
CROCCP4-201ENST00000457096 SPAG9O60271 1321 aaKnown RBP24.51■■□□□ 1.51
CROCCP4-201ENST00000457096 AGLP35573 1532 aa24.5■■□□□ 1.51
CROCCP4-201ENST00000457096 EHBP1L1Q8N3D4 1523 aa24.49■■□□□ 1.51
CROCCP4-201ENST00000457096 ATP7AQ04656 1500 aa24.45■■□□□ 1.51
CROCCP4-201ENST00000457096 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.51
CROCCP4-201ENST00000457096 C3P01024 1663 aa24.44■■□□□ 1.5
CROCCP4-201ENST00000457096 PREX1Q8TCU6 1659 aa24.44■■□□□ 1.5
CROCCP4-201ENST00000457096 SUPT6HQ7KZ85 1726 aaKnown RBP24.43■■□□□ 1.5
CROCCP4-201ENST00000457096 PLEKHH2Q8IVE3 1493 aa24.43■■□□□ 1.5
CROCCP4-201ENST00000457096 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
CROCCP4-201ENST00000457096 ESF1Q9H501 851 aaKnown RBP24.42■■□□□ 1.5
CROCCP4-201ENST00000457096 NCOA2Q15596 1464 aa24.39■■□□□ 1.5
CROCCP4-201ENST00000457096 MBD5Q9P267 1494 aa24.39■■□□□ 1.5
CROCCP4-201ENST00000457096 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
CROCCP4-201ENST00000457096 FBXO41Q8TF61 875 aa24.38■■□□□ 1.49
CROCCP4-201ENST00000457096 A2MP01023 1474 aa24.38■■□□□ 1.49
CROCCP4-201ENST00000457096 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
CROCCP4-201ENST00000457096 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
CROCCP4-201ENST00000457096 GGT6Q6P531 493 aa24.34■■□□□ 1.49
CROCCP4-201ENST00000457096 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
CROCCP4-201ENST00000457096 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
CROCCP4-201ENST00000457096 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
CROCCP4-201ENST00000457096 CNTLNQ9NXG0 1405 aa24.31■■□□□ 1.48
CROCCP4-201ENST00000457096 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
CROCCP4-201ENST00000457096 CLTCQ00610 1675 aaKnown RBP24.3■■□□□ 1.48
CROCCP4-201ENST00000457096 LRRC9Q6ZRR7 1453 aa24.28■■□□□ 1.48
CROCCP4-201ENST00000457096 ADGBQ8N7X0 1667 aa24.26■■□□□ 1.47
CROCCP4-201ENST00000457096 MROH2AA6NES4 1674 aa24.25■■□□□ 1.47
CROCCP4-201ENST00000457096 SETD1BQ9UPS6 1966 aaKnown RBP24.25■■□□□ 1.47
CROCCP4-201ENST00000457096 CCDC141Q6ZP82 1450 aa24.25■■□□□ 1.47
CROCCP4-201ENST00000457096 CERKQ8TCT0 537 aa24.24■■□□□ 1.47
CROCCP4-201ENST00000457096 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
CROCCP4-201ENST00000457096 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
CROCCP4-201ENST00000457096 NPATQ14207 1427 aa24.2■■□□□ 1.46
CROCCP4-201ENST00000457096 PTPRKQ15262 1439 aa24.19■■□□□ 1.46
CROCCP4-201ENST00000457096 KIF3BO15066 747 aa24.19■■□□□ 1.46
CROCCP4-201ENST00000457096 CAMSAP1Q5T5Y3 1602 aa24.16■■□□□ 1.46
CROCCP4-201ENST00000457096 NCOA1Q15788 1441 aa24.16■■□□□ 1.46
CROCCP4-201ENST00000457096 DMRT2Q9Y5R5 561 aa24.15■■□□□ 1.46
CROCCP4-201ENST00000457096 ARHGEF5Q12774 1597 aa24.15■■□□□ 1.46
CROCCP4-201ENST00000457096 NCKAP5LQ9HCH0 1330 aa24.14■■□□□ 1.46
CROCCP4-201ENST00000457096 MYO3AQ8NEV4 1616 aa24.14■■□□□ 1.46
CROCCP4-201ENST00000457096 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
CROCCP4-201ENST00000457096 MAP3K1Q13233 1512 aa24.12■■□□□ 1.45
CROCCP4-201ENST00000457096 PTPRTO14522 1441 aa24.11■■□□□ 1.45
CROCCP4-201ENST00000457096 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
CROCCP4-201ENST00000457096 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
CROCCP4-201ENST00000457096 RSPH4AQ5TD94 716 aa24.11■■□□□ 1.45
CROCCP4-201ENST00000457096 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
CROCCP4-201ENST00000457096 CEP170BQ9Y4F5 1589 aaPredicted RBP24.09■■□□□ 1.45
CROCCP4-201ENST00000457096 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms