RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 PLCH2O75038 1416 aa25.06■■□□□ 1.6
PKNOX1-204ENST00000456957 MYOM3Q5VTT5 1437 aa25.06■■□□□ 1.6
PKNOX1-204ENST00000456957 ARHGAP5Q13017 1502 aa25.04■■□□□ 1.6
PKNOX1-204ENST00000456957 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
PKNOX1-204ENST00000456957 SAMD9LQ8IVG5 1584 aa24.99■■□□□ 1.59
PKNOX1-204ENST00000456957 FANCAO15360 1455 aa24.98■■□□□ 1.59
PKNOX1-204ENST00000456957 TEX14Q8IWB6 1497 aa24.97■■□□□ 1.59
PKNOX1-204ENST00000456957 FGD6Q6ZV73 1430 aa24.97■■□□□ 1.59
PKNOX1-204ENST00000456957 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
PKNOX1-204ENST00000456957 MIA2Q96PC5 1412 aa24.96■■□□□ 1.59
PKNOX1-204ENST00000456957 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
PKNOX1-204ENST00000456957 NEO1Q92859 1461 aa24.94■■□□□ 1.58
PKNOX1-204ENST00000456957 CAMSAP2Q08AD1 1489 aa24.93■■□□□ 1.58
PKNOX1-204ENST00000456957 ABCC1P33527 1531 aa24.92■■□□□ 1.58
PKNOX1-204ENST00000456957 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
PKNOX1-204ENST00000456957 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
PKNOX1-204ENST00000456957 AKNAQ7Z591 1439 aa24.89■■□□□ 1.58
PKNOX1-204ENST00000456957 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
PKNOX1-204ENST00000456957 ZNF777Q9ULD5 760 aaPredicted RBP24.88■■□□□ 1.57
PKNOX1-204ENST00000456957 ZNF644Q9H582 1327 aaPredicted RBP24.87■■□□□ 1.57
PKNOX1-204ENST00000456957 SYCP2Q9BX26 1530 aa24.87■■□□□ 1.57
PKNOX1-204ENST00000456957 ADGRL1O94910 1474 aa24.87■■□□□ 1.57
PKNOX1-204ENST00000456957 PLEKHH2Q8IVE3 1493 aa24.85■■□□□ 1.57
PKNOX1-204ENST00000456957 ARHGEF12Q9NZN5 1544 aa24.84■■□□□ 1.57
PKNOX1-204ENST00000456957 RICTORQ6R327 1708 aa24.82■■□□□ 1.56
PKNOX1-204ENST00000456957 ARHGEF5Q12774 1597 aa24.81■■□□□ 1.56
PKNOX1-204ENST00000456957 KIAA1107Q9UPP5 1409 aa24.81■■□□□ 1.56
PKNOX1-204ENST00000456957 SCAPERQ9BY12 1400 aa24.8■■□□□ 1.56
PKNOX1-204ENST00000456957 DNMT1P26358 1616 aaKnown RBP24.8■■□□□ 1.56
PKNOX1-204ENST00000456957 CROCC2H7BZ55 1655 aa24.8■■□□□ 1.56
PKNOX1-204ENST00000456957 MBD5Q9P267 1494 aa24.79■■□□□ 1.56
PKNOX1-204ENST00000456957 FRMPD1Q5SYB0 1578 aa24.79■■□□□ 1.56
PKNOX1-204ENST00000456957 KDM6BO15054 1643 aa24.77■■□□□ 1.56
PKNOX1-204ENST00000456957 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
PKNOX1-204ENST00000456957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.77■■□□□ 1.56
PKNOX1-204ENST00000456957 POGZQ7Z3K3 1410 aa24.76■■□□□ 1.55
PKNOX1-204ENST00000456957 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
PKNOX1-204ENST00000456957 COL17A1Q9UMD9 1497 aaPredicted RBP24.76■■□□□ 1.55
PKNOX1-204ENST00000456957 HNRNPMP52272 730 aaKnown RBP eCLIP24.75■■□□□ 1.55
PKNOX1-204ENST00000456957 TRAPPC8Q9Y2L5 1435 aa24.75■■□□□ 1.55
PKNOX1-204ENST00000456957 CCDC141Q6ZP82 1450 aa24.74■■□□□ 1.55
PKNOX1-204ENST00000456957 KDM5CP41229 1560 aa24.73■■□□□ 1.55
PKNOX1-204ENST00000456957 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
PKNOX1-204ENST00000456957 DAPK1P53355 1430 aa24.71■■□□□ 1.55
PKNOX1-204ENST00000456957 ABCC5O15440 1437 aa24.69■■□□□ 1.54
PKNOX1-204ENST00000456957 INO80Q9ULG1 1556 aaPredicted RBP24.68■■□□□ 1.54
PKNOX1-204ENST00000456957 MAST1Q9Y2H9 1570 aa24.68■■□□□ 1.54
PKNOX1-204ENST00000456957 ZMYM4Q5VZL5 1548 aa24.68■■□□□ 1.54
PKNOX1-204ENST00000456957 RAPGEF3O95398 923 aa24.68■■□□□ 1.54
PKNOX1-204ENST00000456957 ADGBQ8N7X0 1667 aa24.68■■□□□ 1.54
PKNOX1-204ENST00000456957 HECW2Q9P2P5 1572 aa24.67■■□□□ 1.54
PKNOX1-204ENST00000456957 SHANK2Q9UPX8 1470 aa24.67■■□□□ 1.54
PKNOX1-204ENST00000456957 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
PKNOX1-204ENST00000456957 ZFYVE16Q7Z3T8 1539 aa24.65■■□□□ 1.54
PKNOX1-204ENST00000456957 KIDINS220Q9ULH0 1771 aa24.65■■□□□ 1.54
PKNOX1-204ENST00000456957 RSPH4AQ5TD94 716 aa24.64■■□□□ 1.54
PKNOX1-204ENST00000456957 PTPRKQ15262 1439 aa24.63■■□□□ 1.53
PKNOX1-204ENST00000456957 ATP7AQ04656 1500 aa24.63■■□□□ 1.53
PKNOX1-204ENST00000456957 C9orf84Q5VXU9 1444 aa24.62■■□□□ 1.53
PKNOX1-204ENST00000456957 ITGAEP38570 1179 aa24.61■■□□□ 1.53
PKNOX1-204ENST00000456957 MLH3Q9UHC1 1453 aa24.6■■□□□ 1.53
PKNOX1-204ENST00000456957 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
PKNOX1-204ENST00000456957 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
PKNOX1-204ENST00000456957 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.52
PKNOX1-204ENST00000456957 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
PKNOX1-204ENST00000456957 RTEL1-TNFRSF6BF6WH68 1400 aa24.57■■□□□ 1.52
PKNOX1-204ENST00000456957 DIP2CQ9Y2E4 1556 aa24.56■■□□□ 1.52
PKNOX1-204ENST00000456957 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
PKNOX1-204ENST00000456957 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
PKNOX1-204ENST00000456957 ADGRL2O95490 1459 aa24.56■■□□□ 1.52
PKNOX1-204ENST00000456957 MAGI2Q86UL8 1455 aa24.56■■□□□ 1.52
PKNOX1-204ENST00000456957 ARHGEF40Q8TER5 1519 aa24.56■■□□□ 1.52
PKNOX1-204ENST00000456957 CHIC2Q9UKJ5 165 aa24.53■■□□□ 1.52
PKNOX1-204ENST00000456957 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
PKNOX1-204ENST00000456957 GCC2Q8IWJ2 1684 aa24.51■■□□□ 1.51
PKNOX1-204ENST00000456957 ROCK1Q13464 1354 aa24.5■■□□□ 1.51
PKNOX1-204ENST00000456957 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
PKNOX1-204ENST00000456957 NCOA1Q15788 1441 aa24.49■■□□□ 1.51
PKNOX1-204ENST00000456957 ANKRD30AQ9BXX3 1397 aa24.48■■□□□ 1.51
PKNOX1-204ENST00000456957 SIGLEC1Q9BZZ2 1709 aa24.45■■□□□ 1.5
PKNOX1-204ENST00000456957 KIF15Q9NS87 1388 aa24.44■■□□□ 1.5
PKNOX1-204ENST00000456957 REREQ9P2R6 1566 aa24.44■■□□□ 1.5
PKNOX1-204ENST00000456957 DUOX2Q9NRD8 1548 aa24.44■■□□□ 1.5
PKNOX1-204ENST00000456957 ATP10AO60312 1499 aa24.44■■□□□ 1.5
PKNOX1-204ENST00000456957 KDM4FA0A1W2PPD8 638 aa24.43■■□□□ 1.5
PKNOX1-204ENST00000456957 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
PKNOX1-204ENST00000456957 A2MP01023 1474 aa24.42■■□□□ 1.5
PKNOX1-204ENST00000456957 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
PKNOX1-204ENST00000456957 NAIPQ13075 1403 aa24.4■■□□□ 1.5
PKNOX1-204ENST00000456957 EIF2AK4Q9P2K8 1649 aaKnown RBP24.39■■□□□ 1.5
PKNOX1-204ENST00000456957 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
PKNOX1-204ENST00000456957 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
PKNOX1-204ENST00000456957 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
PKNOX1-204ENST00000456957 ANKRD50Q9ULJ7 1429 aa24.34■■□□□ 1.49
PKNOX1-204ENST00000456957 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
PKNOX1-204ENST00000456957 AGLP35573 1532 aa24.33■■□□□ 1.49
PKNOX1-204ENST00000456957 SETD5Q9C0A6 1442 aa24.31■■□□□ 1.48
PKNOX1-204ENST00000456957 RNF17Q9BXT8 1623 aaKnown RBP24.31■■□□□ 1.48
PKNOX1-204ENST00000456957 DEPDC5O75140 1603 aa24.3■■□□□ 1.48
PKNOX1-204ENST00000456957 UNC13BO14795 1591 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms