RNA–Protein interactions for RNA: ENST00000456708.5

ATG9A-217, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-217ENST00000456708 ADGRL1O94910 1474 aa28.09■■■□□ 2.09
ATG9A-217ENST00000456708 PREX2Q70Z35 1606 aa28.08■■■□□ 2.09
ATG9A-217ENST00000456708 SCAPERQ9BY12 1400 aa28.07■■■□□ 2.08
ATG9A-217ENST00000456708 EHBP1L1Q8N3D4 1523 aa28.04■■■□□ 2.08
ATG9A-217ENST00000456708 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
ATG9A-217ENST00000456708 TIAM1Q13009 1591 aa28.03■■■□□ 2.08
ATG9A-217ENST00000456708 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
ATG9A-217ENST00000456708 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
ATG9A-217ENST00000456708 POGZQ7Z3K3 1410 aa27.98■■■□□ 2.07
ATG9A-217ENST00000456708 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
ATG9A-217ENST00000456708 ZNF777Q9ULD5 760 aaPredicted RBP27.95■■■□□ 2.06
ATG9A-217ENST00000456708 ZMYM4Q5VZL5 1548 aa27.95■■■□□ 2.06
ATG9A-217ENST00000456708 SUPT6HQ7KZ85 1726 aaKnown RBP27.93■■■□□ 2.06
ATG9A-217ENST00000456708 ABCC1P33527 1531 aa27.92■■■□□ 2.06
ATG9A-217ENST00000456708 ITSN2Q9NZM3 1697 aa27.91■■■□□ 2.06
ATG9A-217ENST00000456708 LRRC9Q6ZRR7 1453 aa27.91■■■□□ 2.06
ATG9A-217ENST00000456708 CFDP1Q9UEE9 299 aaPredicted RBP27.91■■■□□ 2.06
ATG9A-217ENST00000456708 MAP3K1Q13233 1512 aa27.91■■■□□ 2.06
ATG9A-217ENST00000456708 ARHGEF40Q8TER5 1519 aa27.91■■■□□ 2.06
ATG9A-217ENST00000456708 ARHGEF12Q9NZN5 1544 aa27.91■■■□□ 2.06
ATG9A-217ENST00000456708 SAMD9LQ8IVG5 1584 aa27.9■■■□□ 2.06
ATG9A-217ENST00000456708 AFAP1Q8N556 730 aa27.9■■■□□ 2.06
ATG9A-217ENST00000456708 NCOA2Q15596 1464 aa27.89■■■□□ 2.06
ATG9A-217ENST00000456708 ZFYVE16Q7Z3T8 1539 aa27.89■■■□□ 2.06
ATG9A-217ENST00000456708 KANK4Q5T7N3 995 aaPredicted RBP27.89■■■□□ 2.06
ATG9A-217ENST00000456708 YEATS2Q9ULM3 1422 aa27.89■■■□□ 2.06
ATG9A-217ENST00000456708 ZNF518AQ6AHZ1 1483 aa27.89■■■□□ 2.05
ATG9A-217ENST00000456708 MAGI2Q86UL8 1455 aa27.88■■■□□ 2.05
ATG9A-217ENST00000456708 TRAPPC8Q9Y2L5 1435 aa27.86■■■□□ 2.05
ATG9A-217ENST00000456708 APLP2Q06481 763 aa27.85■■■□□ 2.05
ATG9A-217ENST00000456708 KDM5CP41229 1560 aa27.85■■■□□ 2.05
ATG9A-217ENST00000456708 MYT1LQ9UL68 1186 aa27.83■■■□□ 2.05
ATG9A-217ENST00000456708 HNRNPMP52272 730 aaKnown RBP eCLIP27.82■■■□□ 2.04
ATG9A-217ENST00000456708 ARID4BQ4LE39 1312 aaPredicted RBP27.82■■■□□ 2.04
ATG9A-217ENST00000456708 SYCP2Q9BX26 1530 aa27.82■■■□□ 2.04
ATG9A-217ENST00000456708 HECW2Q9P2P5 1572 aa27.79■■■□□ 2.04
ATG9A-217ENST00000456708 PLEKHH2Q8IVE3 1493 aa27.79■■■□□ 2.04
ATG9A-217ENST00000456708 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
ATG9A-217ENST00000456708 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
ATG9A-217ENST00000456708 KIAA1107Q9UPP5 1409 aa27.77■■■□□ 2.04
ATG9A-217ENST00000456708 ATP10AO60312 1499 aa27.76■■■□□ 2.03
ATG9A-217ENST00000456708 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.03
ATG9A-217ENST00000456708 BCORL1Q5H9F3 1711 aa27.75■■■□□ 2.03
ATG9A-217ENST00000456708 KIDINS220Q9ULH0 1771 aa27.73■■■□□ 2.03
ATG9A-217ENST00000456708 ADAMTSL3P82987 1691 aa27.72■■■□□ 2.03
ATG9A-217ENST00000456708 C9orf84Q5VXU9 1444 aa27.72■■■□□ 2.03
ATG9A-217ENST00000456708 DIP2CQ9Y2E4 1556 aa27.72■■■□□ 2.03
ATG9A-217ENST00000456708 ABCA6Q8N139 1617 aa27.71■■■□□ 2.03
ATG9A-217ENST00000456708 CAMSAP2Q08AD1 1489 aa27.69■■■□□ 2.02
ATG9A-217ENST00000456708 SPAG9O60271 1321 aaKnown RBP27.68■■■□□ 2.02
ATG9A-217ENST00000456708 MBD5Q9P267 1494 aa27.68■■■□□ 2.02
ATG9A-217ENST00000456708 MLECQ14165 292 aa27.65■■■□□ 2.02
ATG9A-217ENST00000456708 MADDQ8WXG6 1647 aa27.64■■■□□ 2.02
ATG9A-217ENST00000456708 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
ATG9A-217ENST00000456708 ATP7AQ04656 1500 aa27.62■■■□□ 2.01
ATG9A-217ENST00000456708 REREQ9P2R6 1566 aa27.61■■■□□ 2.01
ATG9A-217ENST00000456708 INO80Q9ULG1 1556 aaPredicted RBP27.61■■■□□ 2.01
ATG9A-217ENST00000456708 MIA2Q96PC5 1412 aa27.59■■■□□ 2.01
ATG9A-217ENST00000456708 RIMS1Q86UR5 1692 aaKnown RBP27.59■■■□□ 2.01
ATG9A-217ENST00000456708 CCDC141Q6ZP82 1450 aa27.57■■■□□ 2
ATG9A-217ENST00000456708 PTPRMP28827 1452 aa27.57■■■□□ 2
ATG9A-217ENST00000456708 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
ATG9A-217ENST00000456708 ARHGEF5Q12774 1597 aa27.56■■■□□ 2
ATG9A-217ENST00000456708 FER1L4A9Z1Z3 1794 aa27.55■■■□□ 2
ATG9A-217ENST00000456708 AGLP35573 1532 aa27.53■■■□□ 2
ATG9A-217ENST00000456708 RTEL1-TNFRSF6BF6WH68 1400 aa27.52■■■□□ 2
ATG9A-217ENST00000456708 ADGBQ8N7X0 1667 aa27.5■■□□□ 1.99
ATG9A-217ENST00000456708 PTPN23Q9H3S7 1636 aa27.5■■□□□ 1.99
ATG9A-217ENST00000456708 A2MP01023 1474 aa27.49■■□□□ 1.99
ATG9A-217ENST00000456708 TSPY4P0CV99 314 aa27.48■■□□□ 1.99
ATG9A-217ENST00000456708 TSPY10P0CW01 314 aa27.48■■□□□ 1.99
ATG9A-217ENST00000456708 FGD6Q6ZV73 1430 aa27.47■■□□□ 1.99
ATG9A-217ENST00000456708 PLPPR3Q6T4P5 718 aa27.46■■□□□ 1.99
ATG9A-217ENST00000456708 PLXNC1O60486 1568 aa27.45■■□□□ 1.99
ATG9A-217ENST00000456708 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
ATG9A-217ENST00000456708 TCOF1Q13428 1488 aaKnown RBP27.42■■□□□ 1.98
ATG9A-217ENST00000456708 MAST1Q9Y2H9 1570 aa27.41■■□□□ 1.98
ATG9A-217ENST00000456708 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
ATG9A-217ENST00000456708 ABCC5O15440 1437 aa27.37■■□□□ 1.97
ATG9A-217ENST00000456708 ESF1Q9H501 851 aaKnown RBP27.36■■□□□ 1.97
ATG9A-217ENST00000456708 CROCC2H7BZ55 1655 aa27.36■■□□□ 1.97
ATG9A-217ENST00000456708 CEBPAP49715 358 aaPredicted RBP27.35■■□□□ 1.97
ATG9A-217ENST00000456708 GGT6Q6P531 493 aa27.35■■□□□ 1.97
ATG9A-217ENST00000456708 DNMT1P26358 1616 aaKnown RBP27.34■■□□□ 1.97
ATG9A-217ENST00000456708 DAPK1P53355 1430 aa27.33■■□□□ 1.97
ATG9A-217ENST00000456708 FAM50AQ14320 339 aaKnown RBP27.33■■□□□ 1.97
ATG9A-217ENST00000456708 KIF3BO15066 747 aa27.3■■□□□ 1.96
ATG9A-217ENST00000456708 C3P01024 1663 aa27.3■■□□□ 1.96
ATG9A-217ENST00000456708 SHANK2Q9UPX8 1470 aa27.29■■□□□ 1.96
ATG9A-217ENST00000456708 CLTCQ00610 1675 aaKnown RBP27.28■■□□□ 1.96
ATG9A-217ENST00000456708 CNTLNQ9NXG0 1405 aa27.28■■□□□ 1.96
ATG9A-217ENST00000456708 CHIC2Q9UKJ5 165 aa27.26■■□□□ 1.95
ATG9A-217ENST00000456708 MROH2AA6NES4 1674 aa27.25■■□□□ 1.95
ATG9A-217ENST00000456708 SETD1BQ9UPS6 1966 aaKnown RBP27.24■■□□□ 1.95
ATG9A-217ENST00000456708 RRP7BPQ9NSQ0 103 aa27.23■■□□□ 1.95
ATG9A-217ENST00000456708 PPP6R1Q9UPN7 881 aa27.23■■□□□ 1.95
ATG9A-217ENST00000456708 DUOX2Q9NRD8 1548 aa27.21■■□□□ 1.95
ATG9A-217ENST00000456708 ZMYM3Q14202 1370 aa27.21■■□□□ 1.95
ATG9A-217ENST00000456708 KIF15Q9NS87 1388 aa27.21■■□□□ 1.95
ATG9A-217ENST00000456708 LMTK3Q96Q04 1460 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms