RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
PTCHD1-202ENST00000456522 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
PTCHD1-202ENST00000456522 FMN1Q68DA7 1419 aa14.83□□□□□ -0.04
PTCHD1-202ENST00000456522 ATP1B4Q9UN42 357 aaPredicted RBP14.82□□□□□ -0.04
PTCHD1-202ENST00000456522 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
PTCHD1-202ENST00000456522 PCF11O94913 1555 aaKnown RBP14.78□□□□□ -0.04
PTCHD1-202ENST00000456522 PLB1Q6P1J6 1458 aa14.78□□□□□ -0.04
PTCHD1-202ENST00000456522 DNAJC5Q9H3Z4 198 aa14.78□□□□□ -0.04
PTCHD1-202ENST00000456522 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.04
PTCHD1-202ENST00000456522 RGL2O15211 777 aa14.77□□□□□ -0.05
PTCHD1-202ENST00000456522 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
PTCHD1-202ENST00000456522 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
PTCHD1-202ENST00000456522 ABCA8O94911 1581 aa14.76□□□□□ -0.05
PTCHD1-202ENST00000456522 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
PTCHD1-202ENST00000456522 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
PTCHD1-202ENST00000456522 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
PTCHD1-202ENST00000456522 BBXQ8WY36 941 aaPredicted RBP14.74□□□□□ -0.05
PTCHD1-202ENST00000456522 FYCO1Q9BQS8 1478 aa14.73□□□□□ -0.05
PTCHD1-202ENST00000456522 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
PTCHD1-202ENST00000456522 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
PTCHD1-202ENST00000456522 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTCHD1-202ENST00000456522 ADCY10Q96PN6 1610 aa14.7□□□□□ -0.06
PTCHD1-202ENST00000456522 NUP153P49790 1475 aaKnown RBP14.7□□□□□ -0.06
PTCHD1-202ENST00000456522 LRRIQ1Q96JM4 1722 aa14.7□□□□□ -0.06
PTCHD1-202ENST00000456522 NUBP1P53384 320 aa14.7□□□□□ -0.06
PTCHD1-202ENST00000456522 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
PTCHD1-202ENST00000456522 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
PTCHD1-202ENST00000456522 UHRF1BP1LA0JNW5 1464 aa14.69□□□□□ -0.06
PTCHD1-202ENST00000456522 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
PTCHD1-202ENST00000456522 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
PTCHD1-202ENST00000456522 CDK13Q14004 1512 aaKnown RBP14.67□□□□□ -0.06
PTCHD1-202ENST00000456522 GSE1Q14687 1217 aa14.66□□□□□ -0.06
PTCHD1-202ENST00000456522 ATP10BO94823 1461 aa14.65□□□□□ -0.06
PTCHD1-202ENST00000456522 CCDC18Q5T9S5 1454 aa14.65□□□□□ -0.06
PTCHD1-202ENST00000456522 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
PTCHD1-202ENST00000456522 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
PTCHD1-202ENST00000456522 PPARGC1BQ86YN6 1023 aaKnown RBP14.64□□□□□ -0.07
PTCHD1-202ENST00000456522 CFAP43Q8NDM7 1665 aa14.64□□□□□ -0.07
PTCHD1-202ENST00000456522 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.63□□□□□ -0.07
PTCHD1-202ENST00000456522 TIAM1Q13009 1591 aa14.63□□□□□ -0.07
PTCHD1-202ENST00000456522 KDM5BQ9UGL1 1544 aa14.62□□□□□ -0.07
PTCHD1-202ENST00000456522 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
PTCHD1-202ENST00000456522 HAP1P54257 671 aaPredicted RBP14.61□□□□□ -0.07
PTCHD1-202ENST00000456522 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
PTCHD1-202ENST00000456522 CDK11AQ9UQ88 783 aaPredicted RBP14.59□□□□□ -0.07
PTCHD1-202ENST00000456522 MAP3K1Q13233 1512 aa14.59□□□□□ -0.07
PTCHD1-202ENST00000456522 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
PTCHD1-202ENST00000456522 MTUS2Q5JR59 1369 aa14.58□□□□□ -0.08
PTCHD1-202ENST00000456522 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
PTCHD1-202ENST00000456522 MAGI3Q5TCQ9 1506 aa14.56□□□□□ -0.08
PTCHD1-202ENST00000456522 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
PTCHD1-202ENST00000456522 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
PTCHD1-202ENST00000456522 RNF25Q96BH1 459 aaPredicted RBP14.55□□□□□ -0.08
PTCHD1-202ENST00000456522 KCNH8Q96L42 1107 aa14.54□□□□□ -0.08
PTCHD1-202ENST00000456522 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
PTCHD1-202ENST00000456522 EHBP1L1Q8N3D4 1523 aa14.53□□□□□ -0.08
PTCHD1-202ENST00000456522 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
PTCHD1-202ENST00000456522 HS6ST3Q8IZP7 471 aa14.52□□□□□ -0.09
PTCHD1-202ENST00000456522 WDR7Q9Y4E6 1490 aa14.51□□□□□ -0.09
PTCHD1-202ENST00000456522 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
PTCHD1-202ENST00000456522 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
PTCHD1-202ENST00000456522 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
PTCHD1-202ENST00000456522 KIF14Q15058 1648 aa14.49□□□□□ -0.09
PTCHD1-202ENST00000456522 CHGAP10645 457 aaKnown RBP14.49□□□□□ -0.09
PTCHD1-202ENST00000456522 CHRM1P11229 460 aaPredicted RBP14.49□□□□□ -0.09
PTCHD1-202ENST00000456522 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
PTCHD1-202ENST00000456522 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
PTCHD1-202ENST00000456522 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
PTCHD1-202ENST00000456522 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
PTCHD1-202ENST00000456522 SPRYD3Q8NCJ5 442 aa14.45□□□□□ -0.1
PTCHD1-202ENST00000456522 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
PTCHD1-202ENST00000456522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTCHD1-202ENST00000456522 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
PTCHD1-202ENST00000456522 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
PTCHD1-202ENST00000456522 CCNB3Q8WWL7 1395 aa14.42□□□□□ -0.1
PTCHD1-202ENST00000456522 ABCC10Q5T3U5 1492 aa14.42□□□□□ -0.1
PTCHD1-202ENST00000456522 FAM69CQ0P6D2 419 aa14.41□□□□□ -0.1
PTCHD1-202ENST00000456522 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
PTCHD1-202ENST00000456522 PHLDB1Q86UU1 1377 aa14.41□□□□□ -0.1
PTCHD1-202ENST00000456522 DIP2BQ9P265 1576 aa14.4□□□□□ -0.1
PTCHD1-202ENST00000456522 CDC42BPAQ5VT25 1732 aa14.4□□□□□ -0.1
PTCHD1-202ENST00000456522 MYO5CQ9NQX4 1742 aa14.39□□□□□ -0.11
PTCHD1-202ENST00000456522 ABCA9Q8IUA7 1624 aa14.39□□□□□ -0.11
PTCHD1-202ENST00000456522 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
PTCHD1-202ENST00000456522 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
PTCHD1-202ENST00000456522 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
PTCHD1-202ENST00000456522 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
PTCHD1-202ENST00000456522 MYOM3Q5VTT5 1437 aa14.37□□□□□ -0.11
PTCHD1-202ENST00000456522 GLI2P10070 1586 aa14.37□□□□□ -0.11
PTCHD1-202ENST00000456522 TSPOAP1O95153 1857 aa14.36□□□□□ -0.11
PTCHD1-202ENST00000456522 CD109Q6YHK3 1445 aa14.36□□□□□ -0.11
PTCHD1-202ENST00000456522 CFDP1Q9UEE9 299 aaPredicted RBP14.36□□□□□ -0.11
PTCHD1-202ENST00000456522 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
PTCHD1-202ENST00000456522 CDC42BPBQ9Y5S2 1711 aa14.35□□□□□ -0.11
PTCHD1-202ENST00000456522 PREX2Q70Z35 1606 aa14.35□□□□□ -0.11
PTCHD1-202ENST00000456522 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
PTCHD1-202ENST00000456522 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
PTCHD1-202ENST00000456522 MAP3K4Q9Y6R4 1608 aa14.34□□□□□ -0.11
PTCHD1-202ENST00000456522 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
PTCHD1-202ENST00000456522 PLCH2O75038 1416 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms