RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 ARID4BQ4LE39 1312 aaPredicted RBP35.54■■■■□ 3.28
SEC22C-213ENST00000456222 PTPRMP28827 1452 aa35.54■■■■□ 3.28
SEC22C-213ENST00000456222 MADDQ8WXG6 1647 aa35.54■■■■□ 3.28
SEC22C-213ENST00000456222 POGZQ7Z3K3 1410 aa35.53■■■■□ 3.28
SEC22C-213ENST00000456222 ZFYVE16Q7Z3T8 1539 aa35.52■■■■□ 3.28
SEC22C-213ENST00000456222 CLIP1P30622 1438 aa35.49■■■■□ 3.27
SEC22C-213ENST00000456222 EFCAB2Q5VUJ9 269 aa35.48■■■■□ 3.27
SEC22C-213ENST00000456222 CCDC18Q5T9S5 1454 aa35.46■■■■□ 3.27
SEC22C-213ENST00000456222 MAGI2Q86UL8 1455 aa35.45■■■■□ 3.27
SEC22C-213ENST00000456222 ARHGAP5Q13017 1502 aa35.45■■■■□ 3.27
SEC22C-213ENST00000456222 CDC42BPBQ9Y5S2 1711 aa35.44■■■■□ 3.26
SEC22C-213ENST00000456222 FYCO1Q9BQS8 1478 aa35.42■■■■□ 3.26
SEC22C-213ENST00000456222 RIMS1Q86UR5 1692 aaKnown RBP35.4■■■■□ 3.26
SEC22C-213ENST00000456222 PREX2Q70Z35 1606 aa35.36■■■■□ 3.25
SEC22C-213ENST00000456222 AFAP1Q8N556 730 aa35.32■■■■□ 3.24
SEC22C-213ENST00000456222 KDM5CP41229 1560 aa35.32■■■■□ 3.24
SEC22C-213ENST00000456222 ZNF518AQ6AHZ1 1483 aa35.31■■■■□ 3.24
SEC22C-213ENST00000456222 CDC42BPAQ5VT25 1732 aa35.31■■■■□ 3.24
SEC22C-213ENST00000456222 ATP10AO60312 1499 aa35.29■■■■□ 3.24
SEC22C-213ENST00000456222 ARHGEF12Q9NZN5 1544 aa35.28■■■■□ 3.24
SEC22C-213ENST00000456222 MLECQ14165 292 aa35.27■■■■□ 3.24
SEC22C-213ENST00000456222 ABCC1P33527 1531 aa35.26■■■■□ 3.23
SEC22C-213ENST00000456222 C9orf84Q5VXU9 1444 aa35.25■■■■□ 3.23
SEC22C-213ENST00000456222 FER1L4A9Z1Z3 1794 aa35.23■■■■□ 3.23
SEC22C-213ENST00000456222 TRAPPC8Q9Y2L5 1435 aa35.23■■■■□ 3.23
SEC22C-213ENST00000456222 ITSN2Q9NZM3 1697 aa35.22■■■■□ 3.23
SEC22C-213ENST00000456222 LMTK3Q96Q04 1460 aa35.2■■■■□ 3.23
SEC22C-213ENST00000456222 DIP2CQ9Y2E4 1556 aa35.2■■■■□ 3.23
SEC22C-213ENST00000456222 PLPPR3Q6T4P5 718 aa35.19■■■■□ 3.22
SEC22C-213ENST00000456222 ABCA6Q8N139 1617 aa35.18■■■■□ 3.22
SEC22C-213ENST00000456222 GPATCH8Q9UKJ3 1502 aaKnown RBP35.15■■■■□ 3.22
SEC22C-213ENST00000456222 MLH3Q9UHC1 1453 aa35.15■■■■□ 3.22
SEC22C-213ENST00000456222 CEP162Q5TB80 1403 aa35.15■■■■□ 3.22
SEC22C-213ENST00000456222 ILDR1Q86SU0 546 aaPredicted RBP35.14■■■■□ 3.22
SEC22C-213ENST00000456222 SAMD9LQ8IVG5 1584 aa35.13■■■■□ 3.21
SEC22C-213ENST00000456222 MYT1LQ9UL68 1186 aa35.12■■■■□ 3.21
SEC22C-213ENST00000456222 KIDINS220Q9ULH0 1771 aa35.09■■■■□ 3.21
SEC22C-213ENST00000456222 REREQ9P2R6 1566 aa35.08■■■■□ 3.21
SEC22C-213ENST00000456222 ZNF777Q9ULD5 760 aaPredicted RBP35.08■■■■□ 3.21
SEC22C-213ENST00000456222 SYCP2Q9BX26 1530 aa35.06■■■■□ 3.2
SEC22C-213ENST00000456222 MTUS2Q5JR59 1369 aa35.04■■■■□ 3.2
SEC22C-213ENST00000456222 HSPA2P54652 639 aa35.02■■■■□ 3.2
SEC22C-213ENST00000456222 CEBPAP49715 358 aaPredicted RBP34.99■■■■□ 3.19
SEC22C-213ENST00000456222 HNRNPMP52272 730 aaKnown RBP eCLIP34.99■■■■□ 3.19
SEC22C-213ENST00000456222 CCNB3Q8WWL7 1395 aa34.99■■■■□ 3.19
SEC22C-213ENST00000456222 AGLP35573 1532 aa34.96■■■■□ 3.19
SEC22C-213ENST00000456222 TIAM1Q13009 1591 aa34.96■■■■□ 3.19
SEC22C-213ENST00000456222 LOC105371045A0A1W2PR82 267 aa34.96■■■■□ 3.19
SEC22C-213ENST00000456222 CFDP1Q9UEE9 299 aaPredicted RBP34.96■■■■□ 3.19
SEC22C-213ENST00000456222 EHBP1L1Q8N3D4 1523 aa34.96■■■■□ 3.19
SEC22C-213ENST00000456222 KIAA1107Q9UPP5 1409 aa34.91■■■■□ 3.18
SEC22C-213ENST00000456222 SPAG9O60271 1321 aaKnown RBP34.89■■■■□ 3.18
SEC22C-213ENST00000456222 ZNF644Q9H582 1327 aaPredicted RBP34.89■■■■□ 3.18
SEC22C-213ENST00000456222 PLEKHH2Q8IVE3 1493 aa34.88■■■■□ 3.17
SEC22C-213ENST00000456222 INO80Q9ULG1 1556 aaPredicted RBP34.87■■■■□ 3.17
SEC22C-213ENST00000456222 PREX1Q8TCU6 1659 aa34.87■■■■□ 3.17
SEC22C-213ENST00000456222 ATP7AQ04656 1500 aa34.86■■■■□ 3.17
SEC22C-213ENST00000456222 C3P01024 1663 aa34.86■■■■□ 3.17
SEC22C-213ENST00000456222 SUPT6HQ7KZ85 1726 aaKnown RBP34.82■■■■□ 3.16
SEC22C-213ENST00000456222 MBD5Q9P267 1494 aa34.78■■■■□ 3.16
SEC22C-213ENST00000456222 PLXNC1O60486 1568 aa34.78■■■■□ 3.16
SEC22C-213ENST00000456222 SETD1BQ9UPS6 1966 aaKnown RBP34.78■■■■□ 3.16
SEC22C-213ENST00000456222 NCOA2Q15596 1464 aa34.78■■■■□ 3.16
SEC22C-213ENST00000456222 VPS8Q8N3P4 1428 aa34.75■■■■□ 3.15
SEC22C-213ENST00000456222 A2MP01023 1474 aa34.73■■■■□ 3.15
SEC22C-213ENST00000456222 ESF1Q9H501 851 aaKnown RBP34.7■■■■□ 3.15
SEC22C-213ENST00000456222 UHRF1BP1Q6BDS2 1440 aa34.7■■■■□ 3.15
SEC22C-213ENST00000456222 CNTLNQ9NXG0 1405 aa34.68■■■■□ 3.14
SEC22C-213ENST00000456222 STRCQ7RTU9 1775 aa34.67■■■■□ 3.14
SEC22C-213ENST00000456222 ADGBQ8N7X0 1667 aa34.67■■■■□ 3.14
SEC22C-213ENST00000456222 MROH2AA6NES4 1674 aa34.66■■■■□ 3.14
SEC22C-213ENST00000456222 CAMSAP2Q08AD1 1489 aa34.65■■■■□ 3.14
SEC22C-213ENST00000456222 LRRC9Q6ZRR7 1453 aa34.65■■■■□ 3.14
SEC22C-213ENST00000456222 CLTCQ00610 1675 aaKnown RBP34.63■■■■□ 3.13
SEC22C-213ENST00000456222 FBXO41Q8TF61 875 aa34.63■■■■□ 3.13
SEC22C-213ENST00000456222 RTEL1-TNFRSF6BF6WH68 1400 aa34.59■■■■□ 3.13
SEC22C-213ENST00000456222 ZMYM3Q14202 1370 aa34.59■■■■□ 3.13
SEC22C-213ENST00000456222 CCDC141Q6ZP82 1450 aa34.58■■■■□ 3.13
SEC22C-213ENST00000456222 KANK4Q5T7N3 995 aaPredicted RBP34.58■■■■□ 3.13
SEC22C-213ENST00000456222 GGT6Q6P531 493 aa34.57■■■■□ 3.12
SEC22C-213ENST00000456222 NPATQ14207 1427 aa34.53■■■■□ 3.12
SEC22C-213ENST00000456222 MAP3K1Q13233 1512 aa34.52■■■■□ 3.12
SEC22C-213ENST00000456222 DHX29Q7Z478 1369 aaKnown RBP34.5■■■■□ 3.11
SEC22C-213ENST00000456222 ARHGEF5Q12774 1597 aa34.5■■■■□ 3.11
SEC22C-213ENST00000456222 PTPRKQ15262 1439 aa34.47■■■■□ 3.11
SEC22C-213ENST00000456222 RSPH4AQ5TD94 716 aa34.43■■■■□ 3.1
SEC22C-213ENST00000456222 CERKQ8TCT0 537 aa34.43■■■■□ 3.1
SEC22C-213ENST00000456222 MYO3AQ8NEV4 1616 aa34.42■■■■□ 3.1
SEC22C-213ENST00000456222 NCOA1Q15788 1441 aa34.41■■■■□ 3.1
SEC22C-213ENST00000456222 KIF3BO15066 747 aa34.4■■■■□ 3.1
SEC22C-213ENST00000456222 PPP6R1Q9UPN7 881 aa34.39■■■■□ 3.1
SEC22C-213ENST00000456222 DMRT2Q9Y5R5 561 aa34.39■■■■□ 3.1
SEC22C-213ENST00000456222 CAMSAP1Q5T5Y3 1602 aa34.39■■■■□ 3.1
SEC22C-213ENST00000456222 MYOM3Q5VTT5 1437 aa34.38■■■■□ 3.09
SEC22C-213ENST00000456222 ZNF142P52746 1687 aaPredicted RBP34.37■■■■□ 3.09
SEC22C-213ENST00000456222 PTPRTO14522 1441 aa34.37■■■■□ 3.09
SEC22C-213ENST00000456222 TSPY4P0CV99 314 aa34.34■■■■□ 3.09
SEC22C-213ENST00000456222 TSPY10P0CW01 314 aa34.34■■■■□ 3.09
SEC22C-213ENST00000456222 MAST1Q9Y2H9 1570 aa34.33■■■■□ 3.09
SEC22C-213ENST00000456222 CEP170BQ9Y4F5 1589 aaPredicted RBP34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms