RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 ARHGEF40Q8TER5 1519 aa11.24□□□□□ -0.61
COMMD1-205ENST00000455659 PLCH2O75038 1416 aa11.23□□□□□ -0.61
COMMD1-205ENST00000455659 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
COMMD1-205ENST00000455659 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
COMMD1-205ENST00000455659 ZMYM4Q5VZL5 1548 aa11.22□□□□□ -0.61
COMMD1-205ENST00000455659 PHLDB1Q86UU1 1377 aa11.22□□□□□ -0.61
COMMD1-205ENST00000455659 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
COMMD1-205ENST00000455659 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
COMMD1-205ENST00000455659 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
COMMD1-205ENST00000455659 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
COMMD1-205ENST00000455659 POGZQ7Z3K3 1410 aa11.2□□□□□ -0.62
COMMD1-205ENST00000455659 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
COMMD1-205ENST00000455659 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
COMMD1-205ENST00000455659 KDM5CP41229 1560 aa11.18□□□□□ -0.62
COMMD1-205ENST00000455659 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
COMMD1-205ENST00000455659 GPATCH8Q9UKJ3 1502 aaKnown RBP11.18□□□□□ -0.62
COMMD1-205ENST00000455659 CCNB3Q8WWL7 1395 aa11.17□□□□□ -0.62
COMMD1-205ENST00000455659 ZFYVE16Q7Z3T8 1539 aa11.17□□□□□ -0.62
COMMD1-205ENST00000455659 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
COMMD1-205ENST00000455659 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
COMMD1-205ENST00000455659 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
COMMD1-205ENST00000455659 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
COMMD1-205ENST00000455659 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
COMMD1-205ENST00000455659 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
COMMD1-205ENST00000455659 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
COMMD1-205ENST00000455659 RAPGEF3O95398 923 aa11.12□□□□□ -0.63
COMMD1-205ENST00000455659 APLP2Q06481 763 aa11.12□□□□□ -0.63
COMMD1-205ENST00000455659 ARHGEF12Q9NZN5 1544 aa11.12□□□□□ -0.63
COMMD1-205ENST00000455659 MAGI2Q86UL8 1455 aa11.12□□□□□ -0.63
COMMD1-205ENST00000455659 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
COMMD1-205ENST00000455659 SIGLEC1Q9BZZ2 1709 aa11.11□□□□□ -0.63
COMMD1-205ENST00000455659 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
COMMD1-205ENST00000455659 YEATS2Q9ULM3 1422 aa11.1□□□□□ -0.63
COMMD1-205ENST00000455659 CROCC2H7BZ55 1655 aa11.1□□□□□ -0.63
COMMD1-205ENST00000455659 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
COMMD1-205ENST00000455659 TRAPPC8Q9Y2L5 1435 aa11.09□□□□□ -0.63
COMMD1-205ENST00000455659 CFDP1Q9UEE9 299 aaPredicted RBP11.09□□□□□ -0.63
COMMD1-205ENST00000455659 BCORL1Q5H9F3 1711 aa11.09□□□□□ -0.63
COMMD1-205ENST00000455659 ATP7AQ04656 1500 aa11.09□□□□□ -0.63
COMMD1-205ENST00000455659 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
COMMD1-205ENST00000455659 ARHGEF5Q12774 1597 aa11.08□□□□□ -0.64
COMMD1-205ENST00000455659 CCDC141Q6ZP82 1450 aa11.08□□□□□ -0.64
COMMD1-205ENST00000455659 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-205ENST00000455659 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
COMMD1-205ENST00000455659 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
COMMD1-205ENST00000455659 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
COMMD1-205ENST00000455659 REREQ9P2R6 1566 aa11.07□□□□□ -0.64
COMMD1-205ENST00000455659 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
COMMD1-205ENST00000455659 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
COMMD1-205ENST00000455659 FER1L4A9Z1Z3 1794 aa11.06□□□□□ -0.64
COMMD1-205ENST00000455659 MIA2Q96PC5 1412 aa11.06□□□□□ -0.64
COMMD1-205ENST00000455659 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
COMMD1-205ENST00000455659 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
COMMD1-205ENST00000455659 PLXNC1O60486 1568 aa11.04□□□□□ -0.64
COMMD1-205ENST00000455659 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
COMMD1-205ENST00000455659 MBD5Q9P267 1494 aa11.04□□□□□ -0.64
COMMD1-205ENST00000455659 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
COMMD1-205ENST00000455659 ATP10AO60312 1499 aa11.03□□□□□ -0.64
COMMD1-205ENST00000455659 RIMS1Q86UR5 1692 aaKnown RBP11.03□□□□□ -0.64
COMMD1-205ENST00000455659 MAST1Q9Y2H9 1570 aa11.03□□□□□ -0.64
COMMD1-205ENST00000455659 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
COMMD1-205ENST00000455659 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
COMMD1-205ENST00000455659 TCOF1Q13428 1488 aaKnown RBP11.01□□□□□ -0.65
COMMD1-205ENST00000455659 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
COMMD1-205ENST00000455659 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
COMMD1-205ENST00000455659 AGLP35573 1532 aa11□□□□□ -0.65
COMMD1-205ENST00000455659 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
COMMD1-205ENST00000455659 SPAG9O60271 1321 aaKnown RBP11□□□□□ -0.65
COMMD1-205ENST00000455659 ARID4BQ4LE39 1312 aaPredicted RBP10.99□□□□□ -0.65
COMMD1-205ENST00000455659 A2MP01023 1474 aa10.98□□□□□ -0.65
COMMD1-205ENST00000455659 KDM4FA0A1W2PPD8 638 aa10.97□□□□□ -0.65
COMMD1-205ENST00000455659 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
COMMD1-205ENST00000455659 EIF2AK4Q9P2K8 1649 aaKnown RBP10.96□□□□□ -0.65
COMMD1-205ENST00000455659 DAPK1P53355 1430 aa10.96□□□□□ -0.65
COMMD1-205ENST00000455659 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
COMMD1-205ENST00000455659 PTPRMP28827 1452 aa10.94□□□□□ -0.66
COMMD1-205ENST00000455659 MROH2AA6NES4 1674 aa10.94□□□□□ -0.66
COMMD1-205ENST00000455659 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
COMMD1-205ENST00000455659 ABCC5O15440 1437 aa10.93□□□□□ -0.66
COMMD1-205ENST00000455659 CLTCQ00610 1675 aaKnown RBP10.93□□□□□ -0.66
COMMD1-205ENST00000455659 C3P01024 1663 aa10.92□□□□□ -0.66
COMMD1-205ENST00000455659 DUOX2Q9NRD8 1548 aa10.92□□□□□ -0.66
COMMD1-205ENST00000455659 ZC3H13Q5T200 1668 aaKnown RBP10.92□□□□□ -0.66
COMMD1-205ENST00000455659 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
COMMD1-205ENST00000455659 MLECQ14165 292 aa10.91□□□□□ -0.66
COMMD1-205ENST00000455659 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
COMMD1-205ENST00000455659 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
COMMD1-205ENST00000455659 ADGRL2O95490 1459 aa10.91□□□□□ -0.66
COMMD1-205ENST00000455659 KDM5DQ9BY66 1539 aa10.9□□□□□ -0.66
COMMD1-205ENST00000455659 KIF15Q9NS87 1388 aa10.9□□□□□ -0.67
COMMD1-205ENST00000455659 PRDM15P57071 1507 aaPredicted RBP10.89□□□□□ -0.67
COMMD1-205ENST00000455659 DEPDC5O75140 1603 aa10.89□□□□□ -0.67
COMMD1-205ENST00000455659 MROH1Q8NDA8 1641 aa10.89□□□□□ -0.67
COMMD1-205ENST00000455659 TSPY4P0CV99 314 aa10.89□□□□□ -0.67
COMMD1-205ENST00000455659 TSPY10P0CW01 314 aa10.89□□□□□ -0.67
COMMD1-205ENST00000455659 FAM50AQ14320 339 aaKnown RBP10.89□□□□□ -0.67
COMMD1-205ENST00000455659 ERBINQ96RT1 1412 aa10.89□□□□□ -0.67
COMMD1-205ENST00000455659 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
COMMD1-205ENST00000455659 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
COMMD1-205ENST00000455659 CEP152O94986 1710 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms