RNA–Protein interactions for RNA: ENST00000455571.5

RUNX1-208, Transcript of runt related transcription factor 1, humanhuman

TSL 3

Gene RUNX1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-208ENST00000455571 ADGRL1O94910 1474 aa29.09■■■□□ 2.25
RUNX1-208ENST00000455571 RAPGEF3O95398 923 aa29.07■■■□□ 2.24
RUNX1-208ENST00000455571 TIAM1Q13009 1591 aa29.06■■■□□ 2.24
RUNX1-208ENST00000455571 EFCAB2Q5VUJ9 269 aa29.05■■■□□ 2.24
RUNX1-208ENST00000455571 SCAPERQ9BY12 1400 aa29.01■■■□□ 2.23
RUNX1-208ENST00000455571 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
RUNX1-208ENST00000455571 POGZQ7Z3K3 1410 aa28.99■■■□□ 2.23
RUNX1-208ENST00000455571 ARHGEF40Q8TER5 1519 aa28.99■■■□□ 2.23
RUNX1-208ENST00000455571 SUPT6HQ7KZ85 1726 aaKnown RBP28.98■■■□□ 2.23
RUNX1-208ENST00000455571 ITSN2Q9NZM3 1697 aa28.98■■■□□ 2.23
RUNX1-208ENST00000455571 ABCC1P33527 1531 aa28.95■■■□□ 2.23
RUNX1-208ENST00000455571 GPATCH8Q9UKJ3 1502 aaKnown RBP28.94■■■□□ 2.22
RUNX1-208ENST00000455571 CCNB3Q8WWL7 1395 aa28.94■■■□□ 2.22
RUNX1-208ENST00000455571 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
RUNX1-208ENST00000455571 ZFYVE16Q7Z3T8 1539 aa28.92■■■□□ 2.22
RUNX1-208ENST00000455571 MAP3K1Q13233 1512 aa28.91■■■□□ 2.22
RUNX1-208ENST00000455571 SAMD9LQ8IVG5 1584 aa28.91■■■□□ 2.22
RUNX1-208ENST00000455571 ZNF518AQ6AHZ1 1483 aa28.91■■■□□ 2.22
RUNX1-208ENST00000455571 LRRC9Q6ZRR7 1453 aa28.88■■■□□ 2.21
RUNX1-208ENST00000455571 KDM5CP41229 1560 aa28.88■■■□□ 2.21
RUNX1-208ENST00000455571 MAGI2Q86UL8 1455 aa28.87■■■□□ 2.21
RUNX1-208ENST00000455571 NCOA2Q15596 1464 aa28.86■■■□□ 2.21
RUNX1-208ENST00000455571 KDM4FA0A1W2PPD8 638 aa28.85■■■□□ 2.21
RUNX1-208ENST00000455571 SYCP2Q9BX26 1530 aa28.84■■■□□ 2.21
RUNX1-208ENST00000455571 HECW2Q9P2P5 1572 aa28.84■■■□□ 2.21
RUNX1-208ENST00000455571 ZNF777Q9ULD5 760 aaPredicted RBP28.84■■■□□ 2.21
RUNX1-208ENST00000455571 ARHGEF12Q9NZN5 1544 aa28.84■■■□□ 2.21
RUNX1-208ENST00000455571 CFDP1Q9UEE9 299 aaPredicted RBP28.83■■■□□ 2.21
RUNX1-208ENST00000455571 YEATS2Q9ULM3 1422 aa28.83■■■□□ 2.21
RUNX1-208ENST00000455571 PLEKHH2Q8IVE3 1493 aa28.79■■■□□ 2.2
RUNX1-208ENST00000455571 APLP2Q06481 763 aa28.79■■■□□ 2.2
RUNX1-208ENST00000455571 TRAPPC8Q9Y2L5 1435 aa28.78■■■□□ 2.2
RUNX1-208ENST00000455571 AFAP1Q8N556 730 aa28.77■■■□□ 2.2
RUNX1-208ENST00000455571 BCORL1Q5H9F3 1711 aa28.76■■■□□ 2.19
RUNX1-208ENST00000455571 SIGLEC1Q9BZZ2 1709 aa28.75■■■□□ 2.19
RUNX1-208ENST00000455571 KANK4Q5T7N3 995 aaPredicted RBP28.74■■■□□ 2.19
RUNX1-208ENST00000455571 MYT1LQ9UL68 1186 aa28.74■■■□□ 2.19
RUNX1-208ENST00000455571 ARID4BQ4LE39 1312 aaPredicted RBP28.73■■■□□ 2.19
RUNX1-208ENST00000455571 ABCA6Q8N139 1617 aa28.73■■■□□ 2.19
RUNX1-208ENST00000455571 DIP2CQ9Y2E4 1556 aa28.73■■■□□ 2.19
RUNX1-208ENST00000455571 KIAA1107Q9UPP5 1409 aa28.72■■■□□ 2.19
RUNX1-208ENST00000455571 MLH3Q9UHC1 1453 aa28.72■■■□□ 2.19
RUNX1-208ENST00000455571 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
RUNX1-208ENST00000455571 KIDINS220Q9ULH0 1771 aa28.71■■■□□ 2.19
RUNX1-208ENST00000455571 ATP10AO60312 1499 aa28.71■■■□□ 2.19
RUNX1-208ENST00000455571 ADAMTSL3P82987 1691 aa28.7■■■□□ 2.19
RUNX1-208ENST00000455571 CAMSAP2Q08AD1 1489 aa28.69■■■□□ 2.18
RUNX1-208ENST00000455571 HNRNPMP52272 730 aaKnown RBP eCLIP28.68■■■□□ 2.18
RUNX1-208ENST00000455571 INO80Q9ULG1 1556 aaPredicted RBP28.66■■■□□ 2.18
RUNX1-208ENST00000455571 ZNF644Q9H582 1327 aaPredicted RBP28.66■■■□□ 2.18
RUNX1-208ENST00000455571 MADDQ8WXG6 1647 aa28.65■■■□□ 2.18
RUNX1-208ENST00000455571 ATP7AQ04656 1500 aa28.64■■■□□ 2.18
RUNX1-208ENST00000455571 REREQ9P2R6 1566 aa28.63■■■□□ 2.17
RUNX1-208ENST00000455571 MYOM3Q5VTT5 1437 aa28.62■■■□□ 2.17
RUNX1-208ENST00000455571 SPAG9O60271 1321 aaKnown RBP28.61■■■□□ 2.17
RUNX1-208ENST00000455571 MBD5Q9P267 1494 aa28.6■■■□□ 2.17
RUNX1-208ENST00000455571 RIMS1Q86UR5 1692 aaKnown RBP28.6■■■□□ 2.17
RUNX1-208ENST00000455571 FER1L4A9Z1Z3 1794 aa28.6■■■□□ 2.17
RUNX1-208ENST00000455571 CCDC141Q6ZP82 1450 aa28.58■■■□□ 2.17
RUNX1-208ENST00000455571 ARHGEF5Q12774 1597 aa28.56■■■□□ 2.16
RUNX1-208ENST00000455571 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
RUNX1-208ENST00000455571 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
RUNX1-208ENST00000455571 MLECQ14165 292 aa28.52■■■□□ 2.16
RUNX1-208ENST00000455571 PTPRMP28827 1452 aa28.52■■■□□ 2.16
RUNX1-208ENST00000455571 AGLP35573 1532 aa28.51■■■□□ 2.15
RUNX1-208ENST00000455571 PTPN23Q9H3S7 1636 aa28.51■■■□□ 2.15
RUNX1-208ENST00000455571 PLXNC1O60486 1568 aa28.47■■■□□ 2.15
RUNX1-208ENST00000455571 RTEL1-TNFRSF6BF6WH68 1400 aa28.46■■■□□ 2.15
RUNX1-208ENST00000455571 RSPH4AQ5TD94 716 aa28.45■■■□□ 2.14
RUNX1-208ENST00000455571 A2MP01023 1474 aa28.45■■■□□ 2.14
RUNX1-208ENST00000455571 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
RUNX1-208ENST00000455571 CROCC2H7BZ55 1655 aa28.43■■■□□ 2.14
RUNX1-208ENST00000455571 MAST1Q9Y2H9 1570 aa28.41■■■□□ 2.14
RUNX1-208ENST00000455571 TCOF1Q13428 1488 aaKnown RBP28.38■■■□□ 2.13
RUNX1-208ENST00000455571 TSPY4P0CV99 314 aa28.37■■■□□ 2.13
RUNX1-208ENST00000455571 TSPY10P0CW01 314 aa28.37■■■□□ 2.13
RUNX1-208ENST00000455571 DNMT1P26358 1616 aaKnown RBP28.36■■■□□ 2.13
RUNX1-208ENST00000455571 PLPPR3Q6T4P5 718 aa28.32■■■□□ 2.12
RUNX1-208ENST00000455571 SHANK2Q9UPX8 1470 aa28.32■■■□□ 2.12
RUNX1-208ENST00000455571 DAPK1P53355 1430 aa28.29■■■□□ 2.12
RUNX1-208ENST00000455571 DHX29Q7Z478 1369 aaKnown RBP28.29■■■□□ 2.12
RUNX1-208ENST00000455571 ESF1Q9H501 851 aaKnown RBP28.29■■■□□ 2.12
RUNX1-208ENST00000455571 C3P01024 1663 aa28.29■■■□□ 2.12
RUNX1-208ENST00000455571 MROH2AA6NES4 1674 aa28.28■■■□□ 2.12
RUNX1-208ENST00000455571 CLTCQ00610 1675 aaKnown RBP28.28■■■□□ 2.12
RUNX1-208ENST00000455571 ABCC5O15440 1437 aa28.27■■■□□ 2.12
RUNX1-208ENST00000455571 CNTLNQ9NXG0 1405 aa28.26■■■□□ 2.12
RUNX1-208ENST00000455571 PPARGC1BQ86YN6 1023 aaKnown RBP28.25■■■□□ 2.11
RUNX1-208ENST00000455571 EIF2AK4Q9P2K8 1649 aaKnown RBP28.22■■■□□ 2.11
RUNX1-208ENST00000455571 FAM50AQ14320 339 aaKnown RBP28.22■■■□□ 2.11
RUNX1-208ENST00000455571 GGT6Q6P531 493 aa28.21■■■□□ 2.11
RUNX1-208ENST00000455571 PREX1Q8TCU6 1659 aa28.2■■■□□ 2.11
RUNX1-208ENST00000455571 DUOX2Q9NRD8 1548 aa28.19■■■□□ 2.1
RUNX1-208ENST00000455571 KIF3BO15066 747 aa28.18■■■□□ 2.1
RUNX1-208ENST00000455571 CEBPAP49715 358 aaPredicted RBP28.18■■■□□ 2.1
RUNX1-208ENST00000455571 RNF17Q9BXT8 1623 aaKnown RBP28.18■■■□□ 2.1
RUNX1-208ENST00000455571 LMTK3Q96Q04 1460 aa28.16■■■□□ 2.1
RUNX1-208ENST00000455571 KIF15Q9NS87 1388 aa28.16■■■□□ 2.1
RUNX1-208ENST00000455571 KDM5DQ9BY66 1539 aa28.14■■■□□ 2.1
RUNX1-208ENST00000455571 FAM135AQ9P2D6 1515 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms