RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 PTPRKQ15262 1439 aa25.14■■□□□ 1.62
PDXDC1-204ENST00000455313 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
PDXDC1-204ENST00000455313 ABCA9Q8IUA7 1624 aa25.12■■□□□ 1.61
PDXDC1-204ENST00000455313 HRCP23327 699 aa25.12■■□□□ 1.61
PDXDC1-204ENST00000455313 MAPKBP1O60336 1514 aa25.11■■□□□ 1.61
PDXDC1-204ENST00000455313 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
PDXDC1-204ENST00000455313 ARHGAP5Q13017 1502 aa25.11■■□□□ 1.61
PDXDC1-204ENST00000455313 SAMD9LQ8IVG5 1584 aa25.09■■□□□ 1.61
PDXDC1-204ENST00000455313 PLCH2O75038 1416 aa25.08■■□□□ 1.61
PDXDC1-204ENST00000455313 DAPK1P53355 1430 aa25.08■■□□□ 1.61
PDXDC1-204ENST00000455313 ABCC5O15440 1437 aa25.06■■□□□ 1.6
PDXDC1-204ENST00000455313 ARAP3Q8WWN8 1544 aa25.05■■□□□ 1.6
PDXDC1-204ENST00000455313 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
PDXDC1-204ENST00000455313 SETD5Q9C0A6 1442 aa25.01■■□□□ 1.59
PDXDC1-204ENST00000455313 HFM1A2PYH4 1435 aa25.01■■□□□ 1.59
PDXDC1-204ENST00000455313 ARHGEF5Q12774 1597 aa24.99■■□□□ 1.59
PDXDC1-204ENST00000455313 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
PDXDC1-204ENST00000455313 SYCP2Q9BX26 1530 aa24.99■■□□□ 1.59
PDXDC1-204ENST00000455313 CHIC2Q9UKJ5 165 aa24.98■■□□□ 1.59
PDXDC1-204ENST00000455313 MBD5Q9P267 1494 aa24.98■■□□□ 1.59
PDXDC1-204ENST00000455313 AKNAQ7Z591 1439 aa24.98■■□□□ 1.59
PDXDC1-204ENST00000455313 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
PDXDC1-204ENST00000455313 NAIPQ13075 1403 aa24.96■■□□□ 1.59
PDXDC1-204ENST00000455313 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
PDXDC1-204ENST00000455313 GCC2Q8IWJ2 1684 aa24.96■■□□□ 1.59
PDXDC1-204ENST00000455313 ADGBQ8N7X0 1667 aa24.95■■□□□ 1.58
PDXDC1-204ENST00000455313 ABCC1P33527 1531 aa24.95■■□□□ 1.58
PDXDC1-204ENST00000455313 CCER1Q8TC90 406 aaPredicted RBP24.94■■□□□ 1.58
PDXDC1-204ENST00000455313 SHANK2Q9UPX8 1470 aa24.94■■□□□ 1.58
PDXDC1-204ENST00000455313 KIAA1107Q9UPP5 1409 aa24.94■■□□□ 1.58
PDXDC1-204ENST00000455313 HNRNPMP52272 730 aaKnown RBP eCLIP24.94■■□□□ 1.58
PDXDC1-204ENST00000455313 FANCAO15360 1455 aa24.94■■□□□ 1.58
PDXDC1-204ENST00000455313 CCDC141Q6ZP82 1450 aa24.94■■□□□ 1.58
PDXDC1-204ENST00000455313 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
PDXDC1-204ENST00000455313 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
PDXDC1-204ENST00000455313 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
PDXDC1-204ENST00000455313 RRP7BPQ9NSQ0 103 aa24.91■■□□□ 1.58
PDXDC1-204ENST00000455313 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
PDXDC1-204ENST00000455313 GLI2P10070 1586 aa24.89■■□□□ 1.58
PDXDC1-204ENST00000455313 DIP2BQ9P265 1576 aa24.89■■□□□ 1.58
PDXDC1-204ENST00000455313 C9orf84Q5VXU9 1444 aa24.89■■□□□ 1.58
PDXDC1-204ENST00000455313 MAP3K4Q9Y6R4 1608 aa24.88■■□□□ 1.57
PDXDC1-204ENST00000455313 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
PDXDC1-204ENST00000455313 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
PDXDC1-204ENST00000455313 CFAP74Q9C0B2 1584 aa24.85■■□□□ 1.57
PDXDC1-204ENST00000455313 DHX57Q6P158 1386 aaKnown RBP24.85■■□□□ 1.57
PDXDC1-204ENST00000455313 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
PDXDC1-204ENST00000455313 KDM6BO15054 1643 aa24.83■■□□□ 1.57
PDXDC1-204ENST00000455313 TSPY4P0CV99 314 aa24.83■■□□□ 1.57
PDXDC1-204ENST00000455313 TSPY10P0CW01 314 aa24.83■■□□□ 1.57
PDXDC1-204ENST00000455313 ADGRL1O94910 1474 aa24.83■■□□□ 1.57
PDXDC1-204ENST00000455313 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.56
PDXDC1-204ENST00000455313 TRAPPC8Q9Y2L5 1435 aa24.81■■□□□ 1.56
PDXDC1-204ENST00000455313 FAM69CQ0P6D2 419 aa24.78■■□□□ 1.56
PDXDC1-204ENST00000455313 SCAPERQ9BY12 1400 aa24.77■■□□□ 1.56
PDXDC1-204ENST00000455313 NEO1Q92859 1461 aa24.75■■□□□ 1.55
PDXDC1-204ENST00000455313 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
PDXDC1-204ENST00000455313 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
PDXDC1-204ENST00000455313 KIF15Q9NS87 1388 aa24.74■■□□□ 1.55
PDXDC1-204ENST00000455313 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
PDXDC1-204ENST00000455313 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
PDXDC1-204ENST00000455313 ZFYVE16Q7Z3T8 1539 aa24.72■■□□□ 1.55
PDXDC1-204ENST00000455313 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
PDXDC1-204ENST00000455313 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
PDXDC1-204ENST00000455313 PPRC1Q5VV67 1664 aaKnown RBP24.7■■□□□ 1.55
PDXDC1-204ENST00000455313 TSPOAP1O95153 1857 aa24.7■■□□□ 1.54
PDXDC1-204ENST00000455313 INO80Q9ULG1 1556 aaPredicted RBP24.7■■□□□ 1.54
PDXDC1-204ENST00000455313 ZNF518AQ6AHZ1 1483 aa24.69■■□□□ 1.54
PDXDC1-204ENST00000455313 SPAG9O60271 1321 aaKnown RBP24.67■■□□□ 1.54
PDXDC1-204ENST00000455313 CLSPNQ9HAW4 1339 aa24.67■■□□□ 1.54
PDXDC1-204ENST00000455313 RTEL1-TNFRSF6BF6WH68 1400 aa24.67■■□□□ 1.54
PDXDC1-204ENST00000455313 POGZQ7Z3K3 1410 aa24.67■■□□□ 1.54
PDXDC1-204ENST00000455313 ATP7AQ04656 1500 aa24.66■■□□□ 1.54
PDXDC1-204ENST00000455313 KDM5CP41229 1560 aa24.65■■□□□ 1.54
PDXDC1-204ENST00000455313 DUOX2Q9NRD8 1548 aa24.62■■□□□ 1.53
PDXDC1-204ENST00000455313 TEX14Q8IWB6 1497 aa24.62■■□□□ 1.53
PDXDC1-204ENST00000455313 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
PDXDC1-204ENST00000455313 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
PDXDC1-204ENST00000455313 DENND4BO75064 1496 aaPredicted RBP24.61■■□□□ 1.53
PDXDC1-204ENST00000455313 KIDINS220Q9ULH0 1771 aa24.6■■□□□ 1.53
PDXDC1-204ENST00000455313 RICTORQ6R327 1708 aa24.6■■□□□ 1.53
PDXDC1-204ENST00000455313 HECW2Q9P2P5 1572 aa24.58■■□□□ 1.52
PDXDC1-204ENST00000455313 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
PDXDC1-204ENST00000455313 MLH3Q9UHC1 1453 aa24.55■■□□□ 1.52
PDXDC1-204ENST00000455313 FRMPD1Q5SYB0 1578 aa24.54■■□□□ 1.52
PDXDC1-204ENST00000455313 RAPGEF3O95398 923 aa24.54■■□□□ 1.52
PDXDC1-204ENST00000455313 PZPP20742 1482 aa24.54■■□□□ 1.52
PDXDC1-204ENST00000455313 KDM5DQ9BY66 1539 aa24.53■■□□□ 1.52
PDXDC1-204ENST00000455313 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
PDXDC1-204ENST00000455313 UNC13BO14795 1591 aa24.52■■□□□ 1.52
PDXDC1-204ENST00000455313 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
PDXDC1-204ENST00000455313 ABCA6Q8N139 1617 aa24.49■■□□□ 1.51
PDXDC1-204ENST00000455313 NUP155O75694 1391 aa24.48■■□□□ 1.51
PDXDC1-204ENST00000455313 SLC4A1APQ9BWU0 796 aaKnown RBP24.47■■□□□ 1.51
PDXDC1-204ENST00000455313 ZMYM4Q5VZL5 1548 aa24.47■■□□□ 1.51
PDXDC1-204ENST00000455313 MAGI2Q86UL8 1455 aa24.46■■□□□ 1.51
PDXDC1-204ENST00000455313 EIF2AK4Q9P2K8 1649 aaKnown RBP24.46■■□□□ 1.51
PDXDC1-204ENST00000455313 DHX29Q7Z478 1369 aaKnown RBP24.44■■□□□ 1.5
PDXDC1-204ENST00000455313 DIP2CQ9Y2E4 1556 aa24.43■■□□□ 1.5
PDXDC1-204ENST00000455313 A2MP01023 1474 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms