RNA–Protein interactions for RNA: ENST00000455073.1

LAMA4-210, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-210ENST00000455073 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
LAMA4-210ENST00000455073 RICTORQ6R327 1708 aa23.33■■□□□ 1.33
LAMA4-210ENST00000455073 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
LAMA4-210ENST00000455073 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
LAMA4-210ENST00000455073 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
LAMA4-210ENST00000455073 FRMPD1Q5SYB0 1578 aa23.29■■□□□ 1.32
LAMA4-210ENST00000455073 NCOA2Q15596 1464 aa23.28■■□□□ 1.32
LAMA4-210ENST00000455073 EFCAB2Q5VUJ9 269 aa23.27■■□□□ 1.32
LAMA4-210ENST00000455073 ADGRL1O94910 1474 aa23.25■■□□□ 1.31
LAMA4-210ENST00000455073 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
LAMA4-210ENST00000455073 DENND4BO75064 1496 aaPredicted RBP23.24■■□□□ 1.31
LAMA4-210ENST00000455073 SAMD9LQ8IVG5 1584 aa23.23■■□□□ 1.31
LAMA4-210ENST00000455073 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
LAMA4-210ENST00000455073 ABCC1P33527 1531 aa23.23■■□□□ 1.31
LAMA4-210ENST00000455073 ZMYM4Q5VZL5 1548 aa23.2■■□□□ 1.3
LAMA4-210ENST00000455073 SCAPERQ9BY12 1400 aa23.19■■□□□ 1.3
LAMA4-210ENST00000455073 POGZQ7Z3K3 1410 aa23.17■■□□□ 1.3
LAMA4-210ENST00000455073 RAPGEF3O95398 923 aa23.16■■□□□ 1.3
LAMA4-210ENST00000455073 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
LAMA4-210ENST00000455073 KDM5CP41229 1560 aa23.15■■□□□ 1.3
LAMA4-210ENST00000455073 ARHGEF12Q9NZN5 1544 aa23.14■■□□□ 1.3
LAMA4-210ENST00000455073 PLEKHH2Q8IVE3 1493 aa23.14■■□□□ 1.29
LAMA4-210ENST00000455073 CFDP1Q9UEE9 299 aaPredicted RBP23.14■■□□□ 1.29
LAMA4-210ENST00000455073 ZNF518AQ6AHZ1 1483 aa23.13■■□□□ 1.29
LAMA4-210ENST00000455073 KIAA1107Q9UPP5 1409 aa23.12■■□□□ 1.29
LAMA4-210ENST00000455073 SYCP2Q9BX26 1530 aa23.12■■□□□ 1.29
LAMA4-210ENST00000455073 ARHGEF40Q8TER5 1519 aa23.11■■□□□ 1.29
LAMA4-210ENST00000455073 MAGI2Q86UL8 1455 aa23.11■■□□□ 1.29
LAMA4-210ENST00000455073 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
LAMA4-210ENST00000455073 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
LAMA4-210ENST00000455073 MIA2Q96PC5 1412 aa23.08■■□□□ 1.28
LAMA4-210ENST00000455073 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
LAMA4-210ENST00000455073 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
LAMA4-210ENST00000455073 PPARGC1BQ86YN6 1023 aaKnown RBP23.06■■□□□ 1.28
LAMA4-210ENST00000455073 ZFYVE16Q7Z3T8 1539 aa23.06■■□□□ 1.28
LAMA4-210ENST00000455073 KIDINS220Q9ULH0 1771 aa23.06■■□□□ 1.28
LAMA4-210ENST00000455073 MBD5Q9P267 1494 aa23.04■■□□□ 1.28
LAMA4-210ENST00000455073 MLH3Q9UHC1 1453 aa23.04■■□□□ 1.28
LAMA4-210ENST00000455073 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
LAMA4-210ENST00000455073 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
LAMA4-210ENST00000455073 AFAP1Q8N556 730 aa23.02■■□□□ 1.28
LAMA4-210ENST00000455073 MYT1LQ9UL68 1186 aa23.02■■□□□ 1.28
LAMA4-210ENST00000455073 ZNF644Q9H582 1327 aaPredicted RBP23.02■■□□□ 1.28
LAMA4-210ENST00000455073 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
LAMA4-210ENST00000455073 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
LAMA4-210ENST00000455073 ABCA6Q8N139 1617 aa23■■□□□ 1.27
LAMA4-210ENST00000455073 DIP2CQ9Y2E4 1556 aa22.99■■□□□ 1.27
LAMA4-210ENST00000455073 HNRNPMP52272 730 aaKnown RBP eCLIP22.99■■□□□ 1.27
LAMA4-210ENST00000455073 SIGLEC1Q9BZZ2 1709 aa22.98■■□□□ 1.27
LAMA4-210ENST00000455073 FGD6Q6ZV73 1430 aa22.98■■□□□ 1.27
LAMA4-210ENST00000455073 TCOF1Q13428 1488 aaKnown RBP22.97■■□□□ 1.27
LAMA4-210ENST00000455073 CCDC141Q6ZP82 1450 aa22.97■■□□□ 1.27
LAMA4-210ENST00000455073 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
LAMA4-210ENST00000455073 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
LAMA4-210ENST00000455073 CROCC2H7BZ55 1655 aa22.95■■□□□ 1.26
LAMA4-210ENST00000455073 ATP10AO60312 1499 aa22.94■■□□□ 1.26
LAMA4-210ENST00000455073 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
LAMA4-210ENST00000455073 ADGBQ8N7X0 1667 aa22.93■■□□□ 1.26
LAMA4-210ENST00000455073 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
LAMA4-210ENST00000455073 MAST1Q9Y2H9 1570 aa22.92■■□□□ 1.26
LAMA4-210ENST00000455073 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
LAMA4-210ENST00000455073 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
LAMA4-210ENST00000455073 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
LAMA4-210ENST00000455073 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
LAMA4-210ENST00000455073 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
LAMA4-210ENST00000455073 AGLP35573 1532 aa22.85■■□□□ 1.25
LAMA4-210ENST00000455073 PLXNC1O60486 1568 aa22.84■■□□□ 1.25
LAMA4-210ENST00000455073 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
LAMA4-210ENST00000455073 SHANK2Q9UPX8 1470 aa22.84■■□□□ 1.25
LAMA4-210ENST00000455073 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
LAMA4-210ENST00000455073 ABCC5O15440 1437 aa22.82■■□□□ 1.24
LAMA4-210ENST00000455073 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
LAMA4-210ENST00000455073 DAPK1P53355 1430 aa22.81■■□□□ 1.24
LAMA4-210ENST00000455073 A2MP01023 1474 aa22.79■■□□□ 1.24
LAMA4-210ENST00000455073 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
LAMA4-210ENST00000455073 TSPY4P0CV99 314 aa22.79■■□□□ 1.24
LAMA4-210ENST00000455073 TSPY10P0CW01 314 aa22.79■■□□□ 1.24
LAMA4-210ENST00000455073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
LAMA4-210ENST00000455073 MADDQ8WXG6 1647 aa22.77■■□□□ 1.24
LAMA4-210ENST00000455073 RRBP1Q9P2E9 1410 aaKnown RBP22.75■■□□□ 1.23
LAMA4-210ENST00000455073 RIMS1Q86UR5 1692 aaKnown RBP22.73■■□□□ 1.23
LAMA4-210ENST00000455073 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
LAMA4-210ENST00000455073 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
LAMA4-210ENST00000455073 ADGRL2O95490 1459 aa22.71■■□□□ 1.23
LAMA4-210ENST00000455073 DUOX2Q9NRD8 1548 aa22.69■■□□□ 1.22
LAMA4-210ENST00000455073 MLECQ14165 292 aa22.69■■□□□ 1.22
LAMA4-210ENST00000455073 ITGAEP38570 1179 aa22.68■■□□□ 1.22
LAMA4-210ENST00000455073 CHIC2Q9UKJ5 165 aa22.66■■□□□ 1.22
LAMA4-210ENST00000455073 RNF17Q9BXT8 1623 aaKnown RBP22.66■■□□□ 1.22
LAMA4-210ENST00000455073 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
LAMA4-210ENST00000455073 NCOA1Q15788 1441 aa22.65■■□□□ 1.22
LAMA4-210ENST00000455073 PTPRKQ15262 1439 aa22.64■■□□□ 1.21
LAMA4-210ENST00000455073 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
LAMA4-210ENST00000455073 PTPRMP28827 1452 aa22.63■■□□□ 1.21
LAMA4-210ENST00000455073 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
LAMA4-210ENST00000455073 ERBINQ96RT1 1412 aa22.61■■□□□ 1.21
LAMA4-210ENST00000455073 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
LAMA4-210ENST00000455073 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
LAMA4-210ENST00000455073 C3P01024 1663 aa22.6■■□□□ 1.21
LAMA4-210ENST00000455073 RRP7BPQ9NSQ0 103 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms